RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 PALB2Q86YC2 1186 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 SMC1BQ8NDV3 1235 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 MIPOL1Q8TD10 442 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 CFAP57Q96MR6 1250 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 SERPINB12Q96P63 405 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 NAGPAQ9UK23 515 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 USP15Q9Y4E8 981 aaPredicted RBP4.44□□□□□ -1.7
UBE4A-201ENST00000252108 USH1CQ9Y6N9 552 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 PHF2O75151 1096 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 ZWINTO95229 277 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 ADSSP30520 456 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 SKIV2L2P42285 1042 aaKnown RBP4.44□□□□□ -1.7
UBE4A-201ENST00000252108 CARSP49589 748 aaKnown RBP4.44□□□□□ -1.7
UBE4A-201ENST00000252108 PTK2Q05397 1052 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 GFPT1Q06210 699 aaPredicted RBP4.44□□□□□ -1.7
UBE4A-201ENST00000252108 LGSNQ5TDP6 509 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 TRPM8Q7Z2W7 1104 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 FAM83AQ86UY5 434 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 FAM133AQ8N9E0 248 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 MICAL1Q8TDZ2 1067 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 SREK1Q8WXA9 508 aaKnown RBP4.44□□□□□ -1.7
UBE4A-201ENST00000252108 CASKIN2Q8WXE0 1202 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 PABPC3Q9H361 631 aaKnown RBP4.44□□□□□ -1.7
UBE4A-201ENST00000252108 TMEM206Q9H813 350 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 VAT1LQ9HCJ6 419 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 UBN1Q9NPG3 1134 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 EHD2Q9NZN4 543 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 STOML1Q9UBI4 398 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 ASIC3Q9UHC3 531 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 ATP8A1Q9Y2Q0 1164 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 POLR2AP24928 1970 aaKnown RBP4.44□□□□□ -1.7
UBE4A-201ENST00000252108 LTBP3Q9NS15 1303 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 IGKV6D-21A0A0A0MT36 114 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 ANKRD62A6NC57 917 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 C5orf60A6NFR6 353 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 RAD51CO43502 376 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 WFS1O76024 890 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 MYCP01106 439 aaPredicted RBP4.44□□□□□ -1.7
UBE4A-201ENST00000252108 UCHL3P15374 230 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 CXCR5P32302 372 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 SLC16A2P36021 539 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 SCTRP47872 440 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 FNTAP49354 379 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 CASP4P49662 377 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 XRCC4Q13426 336 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 STAT4Q14765 748 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 KNOP1Q1ED39 458 aaKnown RBP4.44□□□□□ -1.7
UBE4A-201ENST00000252108 HHATQ5VTY9 493 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 POTEGQ6S5H5 508 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 GSPT2Q8IYD1 628 aaKnown RBP4.44□□□□□ -1.7
UBE4A-201ENST00000252108 ARL8AQ96BM9 186 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 PPP1R12CQ9BZL4 782 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 PLEKHA4Q9H4M7 779 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 ADAMTS1Q9UHI8 967 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 HERC5Q9UII4 1024 aaKnown RBP4.44□□□□□ -1.7
UBE4A-201ENST00000252108 DBR1Q9UK59 544 aaKnown RBP4.44□□□□□ -1.7
UBE4A-201ENST00000252108 LOC102724159A0A0B4J2E5 919 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 F8VZ95 297 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 SMAPO00193 183 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 NUDT17P0C025 328 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 ATF2P15336 505 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 PTGIRP43119 386 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 GTF2BQ00403 316 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 ICA1Q05084 483 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 KCNH2Q12809 1159 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 PWP2Q15269 919 aaKnown RBP4.44□□□□□ -1.7
UBE4A-201ENST00000252108 CBWD6Q4V339 395 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 CBWD3Q5JTY5 395 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 CBWD5Q5RIA9 395 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 RHBDF2Q6PJF5 856 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 ZDHHC24Q6UX98 284 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 KCTD1Q719H9 257 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 APBB1IPQ7Z5R6 666 aaPredicted RBP4.44□□□□□ -1.7
UBE4A-201ENST00000252108 SAMD3Q8N6K7 520 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 C12orf50Q8NA57 414 aaPredicted RBP4.44□□□□□ -1.7
UBE4A-201ENST00000252108 RIN2Q8WYP3 895 aaPredicted RBP4.44□□□□□ -1.7
UBE4A-201ENST00000252108 RPS6KC1Q96S38 1066 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 ERP44Q9BS26 406 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 TMEM109Q9BVC6 243 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 DPH5Q9H2P9 285 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 SCN4AP35499 1836 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 MYH9P35579 1960 aaKnown RBP4.43□□□□□ -1.7
UBE4A-201ENST00000252108 LRRN2O75325 713 aa4.43□□□□□ -1.7
UBE4A-201ENST00000252108 FAM153BP0C7A2 387 aa4.43□□□□□ -1.7
UBE4A-201ENST00000252108 VCAM1P19320 739 aa4.43□□□□□ -1.7
UBE4A-201ENST00000252108 ECE1P42892 770 aa4.43□□□□□ -1.7
UBE4A-201ENST00000252108 ERVK-9P63128 1117 aa4.43□□□□□ -1.7
UBE4A-201ENST00000252108 FAM153CQ494X1 144 aa4.43□□□□□ -1.7
UBE4A-201ENST00000252108 FAM186BQ8IYM0 893 aa4.43□□□□□ -1.7
UBE4A-201ENST00000252108 ANKRD13CQ8N6S4 541 aa4.43□□□□□ -1.7
UBE4A-201ENST00000252108 CCDC89Q8N998 374 aa4.43□□□□□ -1.7
UBE4A-201ENST00000252108 CCDC110Q8TBZ0 833 aa4.43□□□□□ -1.7
UBE4A-201ENST00000252108 TATDN2Q93075 761 aa4.43□□□□□ -1.7
UBE4A-201ENST00000252108 TEKT1Q969V4 418 aa4.43□□□□□ -1.7
UBE4A-201ENST00000252108 C12orf42Q96LP6 360 aa4.43□□□□□ -1.7
UBE4A-201ENST00000252108 STK33Q9BYT3 514 aa4.43□□□□□ -1.7
UBE4A-201ENST00000252108 PSTPIP2Q9H939 334 aa4.43□□□□□ -1.7
UBE4A-201ENST00000252108 FAM153AQ9UHL3 310 aa4.43□□□□□ -1.7
UBE4A-201ENST00000252108 SMG5Q9UPR3 1016 aaKnown RBP4.43□□□□□ -1.7
UBE4A-201ENST00000252108 NR2E1Q9Y466 385 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms