RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 HEXIM2Q96MH2 286 aaKnown RBP14.61□□□□□ -0.07
NCLN-201ENST00000246117 TGS1Q96RS0 853 aaKnown RBP14.61□□□□□ -0.07
NCLN-201ENST00000246117 MXRA8Q9BRK3 442 aa14.61□□□□□ -0.07
NCLN-201ENST00000246117 SEL1LQ9UBV2 794 aa14.61□□□□□ -0.07
NCLN-201ENST00000246117 FAM198AQ9UFP1 575 aa14.61□□□□□ -0.07
NCLN-201ENST00000246117 FEM1BQ9UK73 627 aa14.61□□□□□ -0.07
NCLN-201ENST00000246117 ARHGAP42A6NI28 874 aa14.61□□□□□ -0.07
NCLN-201ENST00000246117 INHBAP08476 426 aa14.61□□□□□ -0.07
NCLN-201ENST00000246117 RRM1P23921 792 aa14.61□□□□□ -0.07
NCLN-201ENST00000246117 KCNT1Q5JUK3 1230 aa14.61□□□□□ -0.07
NCLN-201ENST00000246117 RTN2O75298 545 aa14.6□□□□□ -0.07
NCLN-201ENST00000246117 FGRP09769 529 aa14.6□□□□□ -0.07
NCLN-201ENST00000246117 PDIA2Q13087 525 aaKnown RBP14.6□□□□□ -0.07
NCLN-201ENST00000246117 CYP4A22Q5TCH4 519 aa14.6□□□□□ -0.07
NCLN-201ENST00000246117 LRRC34Q8IZ02 419 aa14.6□□□□□ -0.07
NCLN-201ENST00000246117 RBM46Q8TBY0 533 aaKnown RBP14.6□□□□□ -0.07
NCLN-201ENST00000246117 XPO6Q96QU8 1125 aaKnown RBP14.6□□□□□ -0.07
NCLN-201ENST00000246117 C10orf88Q9H8K7 445 aa14.6□□□□□ -0.07
NCLN-201ENST00000246117 MRPL47Q9HD33 250 aaKnown RBP14.6□□□□□ -0.07
NCLN-201ENST00000246117 KLC4Q9NSK0 619 aa14.6□□□□□ -0.07
NCLN-201ENST00000246117 CCDC195A0A1B0GUA6 201 aa14.6□□□□□ -0.07
NCLN-201ENST00000246117 TMEM120BA0PK00 339 aa14.6□□□□□ -0.07
NCLN-201ENST00000246117 TMEM253P0C7T8 217 aa14.6□□□□□ -0.07
NCLN-201ENST00000246117 HNRNPH1P31943 449 aaKnown RBP14.6□□□□□ -0.07
NCLN-201ENST00000246117 ARSEP51690 589 aa14.6□□□□□ -0.07
NCLN-201ENST00000246117 CCDC62Q6P9F0 684 aa14.6□□□□□ -0.07
NCLN-201ENST00000246117 MPHOSPH6Q99547 160 aaKnown RBP14.6□□□□□ -0.07
NCLN-201ENST00000246117 NRBP2Q9NSY0 501 aa14.6□□□□□ -0.07
NCLN-201ENST00000246117 NR2E1Q9Y466 385 aa14.6□□□□□ -0.07
NCLN-201ENST00000246117 COL1A1P02452 1464 aaPredicted RBP14.6□□□□□ -0.07
NCLN-201ENST00000246117 E2F8A0AVK6 867 aa14.6□□□□□ -0.07
NCLN-201ENST00000246117 SMARCA1P28370 1054 aa14.6□□□□□ -0.07
NCLN-201ENST00000246117 P3H1Q32P28 736 aa14.6□□□□□ -0.07
NCLN-201ENST00000246117 DCAF15Q66K64 600 aa14.6□□□□□ -0.07
NCLN-201ENST00000246117 MIS18BP1Q6P0N0 1132 aa14.6□□□□□ -0.07
NCLN-201ENST00000246117 EPM2AIP1Q7L775 607 aaPredicted RBP14.6□□□□□ -0.07
NCLN-201ENST00000246117 CCNYQ8ND76 341 aa14.6□□□□□ -0.07
NCLN-201ENST00000246117 CNOT10Q9H9A5 744 aaKnown RBP14.6□□□□□ -0.07
NCLN-201ENST00000246117 ETNK1Q9HBU6 452 aa14.6□□□□□ -0.07
NCLN-201ENST00000246117 TBC1D22BQ9NU19 505 aa14.6□□□□□ -0.07
NCLN-201ENST00000246117 HERC5Q9UII4 1024 aaKnown RBP14.6□□□□□ -0.07
NCLN-201ENST00000246117 TROVE2P10155 538 aaKnown RBP eCLIP14.59□□□□□ -0.07
NCLN-201ENST00000246117 PYGMP11217 842 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 CDK17Q00537 523 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 PPP3CAQ08209 521 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 CROCCP2Q86T23 111 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 MAML1Q92585 1016 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 ZDHHC15Q96MV8 337 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 DDX23Q9BUQ8 820 aaKnown RBP14.59□□□□□ -0.07
NCLN-201ENST00000246117 ATP6V0A4Q9HBG4 840 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 SMYD2Q9NRG4 433 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 COMMD10Q9Y6G5 202 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 SLIT3O75094 1523 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 GOLGA4Q13439 2230 aaKnown RBP14.59□□□□□ -0.07
NCLN-201ENST00000246117 SHBGP04278 402 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 HSPA6P17066 643 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 MSH2P43246 934 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 ITGA8P53708 1063 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 WDR72Q3MJ13 1102 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 ARHGEF18Q6ZSZ5 1173 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 OTOP1Q7RTM1 612 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 SPATS2Q86XZ4 545 aaKnown RBP14.59□□□□□ -0.07
NCLN-201ENST00000246117 RNF149Q8NC42 400 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 IL31RAQ8NI17 732 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 SLC5A5Q92911 643 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 WDR18Q9BV38 432 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 SUCLA2Q9P2R7 463 aaPredicted RBP14.59□□□□□ -0.07
NCLN-201ENST00000246117 IVNS1ABPQ9Y6Y0 642 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 TBX3O15119 743 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 NOL4O94818 638 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 MDH1BQ5I0G3 518 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 HGSNATQ68CP4 663 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 DCLK2Q8N568 766 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 CFAP61Q8NHU2 1237 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 ATP8B4Q8TF62 1192 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 MCEEQ96PE7 176 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 RBM15Q96T37 977 aaKnown RBP eCLIP14.59□□□□□ -0.07
NCLN-201ENST00000246117 SLC13A1Q9BZW2 595 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 MIS12Q9H081 205 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 DNAJC5Q9H3Z4 198 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 RNF19AQ9NV58 838 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 AIPL1Q9NZN9 384 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 RGPD1P0DJD0 1748 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 BAZ2AQ9UIF9 1905 aaKnown RBP14.59□□□□□ -0.07
NCLN-201ENST00000246117 DCCP43146 1447 aa14.59□□□□□ -0.07
NCLN-201ENST00000246117 SPATA31C1P0DKV0 1188 aa14.58□□□□□ -0.07
NCLN-201ENST00000246117 MAPK7Q13164 816 aa14.58□□□□□ -0.07
NCLN-201ENST00000246117 EFCC1Q9HA90 598 aa14.58□□□□□ -0.07
NCLN-201ENST00000246117 AS3MTQ9HBK9 375 aa14.58□□□□□ -0.07
NCLN-201ENST00000246117 CCDC78A2IDD5 438 aa14.58□□□□□ -0.08
NCLN-201ENST00000246117 RASSF10A6NK89 507 aa14.58□□□□□ -0.08
NCLN-201ENST00000246117 DCDC2CA8MYV0 355 aa14.58□□□□□ -0.08
NCLN-201ENST00000246117 SLC16A3O15427 465 aaKnown RBP14.58□□□□□ -0.08
NCLN-201ENST00000246117 PHF2O75151 1096 aa14.58□□□□□ -0.08
NCLN-201ENST00000246117 FAM107AO95990 144 aa14.58□□□□□ -0.08
NCLN-201ENST00000246117 HLA-DRAP01903 254 aa14.58□□□□□ -0.08
NCLN-201ENST00000246117 ZNF844Q08AG5 666 aa14.58□□□□□ -0.08
NCLN-201ENST00000246117 PHLDB3Q6NSJ2 640 aa14.58□□□□□ -0.08
NCLN-201ENST00000246117 GPD1LQ8N335 351 aa14.58□□□□□ -0.08
NCLN-201ENST00000246117 NSUN6Q8TEA1 469 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms