RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 MAPK6Q16659 721 aa21.04■□□□□ 0.96
SOX4-201ENST00000244745 P3H1Q32P28 736 aa21.04■□□□□ 0.96
SOX4-201ENST00000244745 NUDCD3Q8IVD9 361 aa21.04■□□□□ 0.96
SOX4-201ENST00000244745 ATL2Q8NHH9 583 aa21.04■□□□□ 0.96
SOX4-201ENST00000244745 TRPV6Q9H1D0 765 aa21.04■□□□□ 0.96
SOX4-201ENST00000244745 CACYBPQ9HB71 228 aaKnown RBP21.04■□□□□ 0.96
SOX4-201ENST00000244745 GOLGA8RI6L899 631 aa21.04■□□□□ 0.96
SOX4-201ENST00000244745 SNRNP48Q6IEG0 339 aaKnown RBP21.04■□□□□ 0.96
SOX4-201ENST00000244745 ARMCX2Q7L311 632 aa21.04■□□□□ 0.96
SOX4-201ENST00000244745 USP15Q9Y4E8 981 aaPredicted RBP21.04■□□□□ 0.96
SOX4-201ENST00000244745 CEP170BQ9Y4F5 1589 aaPredicted RBP21.04■□□□□ 0.96
SOX4-201ENST00000244745 DNAJC6O75061 913 aa21.04■□□□□ 0.96
SOX4-201ENST00000244745 CCND1P24385 295 aa21.04■□□□□ 0.96
SOX4-201ENST00000244745 EPHA7Q15375 998 aa21.04■□□□□ 0.96
SOX4-201ENST00000244745 STXBP2Q15833 593 aa21.04■□□□□ 0.96
SOX4-201ENST00000244745 RHPN2Q8IUC4 686 aa21.04■□□□□ 0.96
SOX4-201ENST00000244745 RBAKQ9NYW8 714 aaPredicted RBP21.04■□□□□ 0.96
SOX4-201ENST00000244745 ENOSF1Q7L5Y1 443 aa21.04■□□□□ 0.96
SOX4-201ENST00000244745 TRAPPC11Q7Z392 1133 aa21.04■□□□□ 0.96
SOX4-201ENST00000244745 TRAF3IP3Q9Y228 551 aa21.04■□□□□ 0.96
SOX4-201ENST00000244745 KRT7P08729 469 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 MDH1BQ5I0G3 518 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 SYCP2LQ5T4T6 812 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 ARL8AQ96BM9 186 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 ZNF668Q96K58 619 aaPredicted RBP21.03■□□□□ 0.96
SOX4-201ENST00000244745 CCNA1P78396 465 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 ZNF543Q08ER8 600 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 ACAD11Q709F0 780 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 LCA5Q86VQ0 697 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 UPF3AQ9H1J1 476 aaKnown RBP21.03■□□□□ 0.96
SOX4-201ENST00000244745 PITPNM2Q9BZ72 1349 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 USP32Q8NFA0 1604 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 C21orf2O43822 256 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 MMP10P09238 476 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 YWHABP31946 246 aaKnown RBP21.03■□□□□ 0.96
SOX4-201ENST00000244745 SUPT20HL1Q3ZLR7 823 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 TRPM8Q7Z2W7 1104 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 ISCUQ9H1K1 167 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 GTSE1Q9NYZ3 720 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 H3BQF6 201 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 TAC1P20366 129 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 YWHAHQ04917 246 aaPredicted RBP21.03■□□□□ 0.96
SOX4-201ENST00000244745 TRIM72Q6ZMU5 477 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 TRIM15Q9C019 465 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 CYP4F11Q9HBI6 524 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 KPNA7A9QM74 516 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 HNRNPCP07910 306 aaKnown RBP eCLIP21.03■□□□□ 0.96
SOX4-201ENST00000244745 KRT10P13645 584 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 KLRC1P26715 233 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 BAG6P46379 1132 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 DTNBP1Q96EV8 351 aa21.03■□□□□ 0.96
SOX4-201ENST00000244745 ZNF34Q8IZ26 560 aa21.02■□□□□ 0.96
SOX4-201ENST00000244745 SLC1A1P43005 524 aa21.02■□□□□ 0.96
SOX4-201ENST00000244745 HIF1AQ16665 826 aa21.02■□□□□ 0.96
SOX4-201ENST00000244745 GJB7Q6PEY0 223 aa21.02■□□□□ 0.96
SOX4-201ENST00000244745 JAMLQ86YT9 394 aa21.02■□□□□ 0.96
SOX4-201ENST00000244745 KIF2BQ8N4N8 673 aa21.02■□□□□ 0.96
SOX4-201ENST00000244745 SLC26A7Q8TE54 656 aa21.02■□□□□ 0.96
SOX4-201ENST00000244745 KIF20BQ96Q89 1820 aa21.02■□□□□ 0.96
SOX4-201ENST00000244745 FAM107AO95990 144 aa21.02■□□□□ 0.96
SOX4-201ENST00000244745 SYDE1Q6ZW31 735 aaPredicted RBP21.02■□□□□ 0.96
SOX4-201ENST00000244745 CASKIN2Q8WXE0 1202 aa21.02■□□□□ 0.96
SOX4-201ENST00000244745 NVLO15381 856 aaKnown RBP21.02■□□□□ 0.95
SOX4-201ENST00000244745 ZC2HC1CQ53FD0 456 aaPredicted RBP21.02■□□□□ 0.95
SOX4-201ENST00000244745 ANO5Q75V66 913 aa21.02■□□□□ 0.95
SOX4-201ENST00000244745 DTX3LQ8TDB6 740 aa21.02■□□□□ 0.95
SOX4-201ENST00000244745 LRRIQ3A6PVS8 624 aaPredicted RBP21.01■□□□□ 0.95
SOX4-201ENST00000244745 ATMINO43313 823 aaPredicted RBP21.01■□□□□ 0.95
SOX4-201ENST00000244745 KLC1Q07866 573 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 SLC12A6Q9UHW9 1150 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 AGO2Q9UKV8 859 aaKnown RBP21.01■□□□□ 0.95
SOX4-201ENST00000244745 HPSEQ9Y251 543 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 ZNF711Q9Y462 761 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 FAM49AQ9H0Q0 323 aaPredicted RBP21.01■□□□□ 0.95
SOX4-201ENST00000244745 KRT82Q9NSB4 513 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 RNF146Q9NTX7 359 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 SALL3Q9BXA9 1300 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 KCNA3P22001 575 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 ANXA13P27216 316 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 TOB1P50616 345 aaPredicted RBP21.01■□□□□ 0.95
SOX4-201ENST00000244745 DNAJC7Q99615 494 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 NOD2Q9HC29 1040 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 NPHS2Q9NP85 383 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 GEMIN8Q9NWZ8 242 aaKnown RBP21.01■□□□□ 0.95
SOX4-201ENST00000244745 MAD2L2Q9UI95 211 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 CEMIPQ8WUJ3 1361 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 ARHGAP10A1A4S6 786 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 CCT8L1PA6NM43 557 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 COPB2P35606 906 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 ARPP19P56211 112 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 CIAPIN1Q6FI81 312 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 FAM118BQ9BPY3 351 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 SH2D3AQ9BRG2 576 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 DUSP10Q9Y6W6 482 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 AP1B1Q10567 949 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 CYB5D1Q6P9G0 228 aa21.01■□□□□ 0.95
SOX4-201ENST00000244745 DHX38Q92620 1227 aaKnown RBP21.01■□□□□ 0.95
SOX4-201ENST00000244745 HABP4Q5JVS0 413 aaKnown RBP21■□□□□ 0.95
SOX4-201ENST00000244745 NSUN6Q8TEA1 469 aaKnown RBP21■□□□□ 0.95
SOX4-201ENST00000244745 TMEM117Q9H0C3 514 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms