RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 SOWAHDA6NJG2 315 aa14.03□□□□□ -0.16
HIF3A-201ENST00000244302 EXTL3O43909 919 aa14.03□□□□□ -0.16
HIF3A-201ENST00000244302 ZSCAN20P17040 1043 aaPredicted RBP14.03□□□□□ -0.16
HIF3A-201ENST00000244302 POLR2FP61218 127 aaKnown RBP14.03□□□□□ -0.16
HIF3A-201ENST00000244302 WDR59Q6PJI9 974 aa14.03□□□□□ -0.16
HIF3A-201ENST00000244302 KIF18AQ8NI77 898 aa14.03□□□□□ -0.16
HIF3A-201ENST00000244302 ATRIPQ8WXE1 791 aa14.03□□□□□ -0.16
HIF3A-201ENST00000244302 C2orf40Q9H1Z8 148 aa14.03□□□□□ -0.16
HIF3A-201ENST00000244302 CDT1Q9H211 546 aa14.03□□□□□ -0.16
HIF3A-201ENST00000244302 TMX1Q9H3N1 280 aa14.03□□□□□ -0.16
HIF3A-201ENST00000244302 PDZD7Q9H5P4 517 aa14.03□□□□□ -0.16
HIF3A-201ENST00000244302 TRMT1Q9NXH9 659 aaKnown RBP14.03□□□□□ -0.16
HIF3A-201ENST00000244302 KCNG1Q9UIX4 513 aa14.03□□□□□ -0.16
HIF3A-201ENST00000244302 ZNF233A6NK53 670 aa14.02□□□□□ -0.16
HIF3A-201ENST00000244302 ZEB2O60315 1214 aa14.02□□□□□ -0.16
HIF3A-201ENST00000244302 CHRNA1P02708 482 aa14.02□□□□□ -0.16
HIF3A-201ENST00000244302 PLEKP08567 350 aaPredicted RBP14.02□□□□□ -0.16
HIF3A-201ENST00000244302 KRT13P13646 458 aa14.02□□□□□ -0.16
HIF3A-201ENST00000244302 CST5P28325 142 aaPredicted RBP14.02□□□□□ -0.16
HIF3A-201ENST00000244302 ZNF568Q3ZCX4 644 aa14.02□□□□□ -0.16
HIF3A-201ENST00000244302 SLC9C1Q4G0N8 1177 aa14.02□□□□□ -0.16
HIF3A-201ENST00000244302 ZPBP2Q6X784 338 aa14.02□□□□□ -0.16
HIF3A-201ENST00000244302 INTS8Q75QN2 995 aaKnown RBP14.02□□□□□ -0.16
HIF3A-201ENST00000244302 OR5B17Q8NGF7 314 aa14.02□□□□□ -0.16
HIF3A-201ENST00000244302 LMO3Q8TAP4 145 aa14.02□□□□□ -0.16
HIF3A-201ENST00000244302 BAP1Q92560 729 aa14.02□□□□□ -0.16
HIF3A-201ENST00000244302 DHX38Q92620 1227 aaKnown RBP14.02□□□□□ -0.16
HIF3A-201ENST00000244302 PI4K2AQ9BTU6 479 aa14.02□□□□□ -0.16
HIF3A-201ENST00000244302 EIF2AQ9BY44 585 aaKnown RBP14.02□□□□□ -0.16
HIF3A-201ENST00000244302 RNF208Q9H0X6 261 aa14.02□□□□□ -0.16
HIF3A-201ENST00000244302 ABHD10Q9NUJ1 306 aa14.02□□□□□ -0.16
HIF3A-201ENST00000244302 GCNT4Q9P109 453 aa14.02□□□□□ -0.16
HIF3A-201ENST00000244302 CAPN11Q9UMQ6 739 aa14.02□□□□□ -0.16
HIF3A-201ENST00000244302 FHOD1Q9Y613 1164 aa14.02□□□□□ -0.16
HIF3A-201ENST00000244302 CNTNAP2Q9UHC6 1331 aa14.02□□□□□ -0.17
HIF3A-201ENST00000244302 KIAA0100Q14667 2235 aaKnown RBP14.02□□□□□ -0.17
HIF3A-201ENST00000244302 SIP14410 1827 aa14.02□□□□□ -0.17
HIF3A-201ENST00000244302 CCP110O43303 1012 aa14.02□□□□□ -0.17
HIF3A-201ENST00000244302 KPNA6O60684 536 aa14.02□□□□□ -0.17
HIF3A-201ENST00000244302 DARSP14868 501 aaKnown RBP14.02□□□□□ -0.17
HIF3A-201ENST00000244302 LBX1P52954 281 aa14.02□□□□□ -0.17
HIF3A-201ENST00000244302 SNRPFP62306 86 aaKnown RBP14.02□□□□□ -0.17
HIF3A-201ENST00000244302 CBX1P83916 185 aa14.02□□□□□ -0.17
HIF3A-201ENST00000244302 MCL1Q07820 350 aa14.02□□□□□ -0.17
HIF3A-201ENST00000244302 SNX17Q15036 470 aa14.02□□□□□ -0.17
HIF3A-201ENST00000244302 PTGISQ16647 500 aa14.02□□□□□ -0.17
HIF3A-201ENST00000244302 EXOC3L4Q17RC7 722 aa14.02□□□□□ -0.17
HIF3A-201ENST00000244302 IFNLR1Q8IU57 520 aaPredicted RBP14.02□□□□□ -0.17
HIF3A-201ENST00000244302 TAS1R2Q8TE23 839 aa14.02□□□□□ -0.17
HIF3A-201ENST00000244302 KAT5Q92993 513 aa14.02□□□□□ -0.17
HIF3A-201ENST00000244302 NFKBIZQ9BYH8 718 aa14.02□□□□□ -0.17
HIF3A-201ENST00000244302 GANQ9H2C0 597 aa14.02□□□□□ -0.17
HIF3A-201ENST00000244302 PRMT7Q9NVM4 692 aaPredicted RBP14.02□□□□□ -0.17
HIF3A-201ENST00000244302 RBAKQ9NYW8 714 aaPredicted RBP14.02□□□□□ -0.17
HIF3A-201ENST00000244302 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.02□□□□□ -0.17
HIF3A-201ENST00000244302 A0A1W2PQ45 241 aaPredicted RBP14.01□□□□□ -0.17
HIF3A-201ENST00000244302 A0A1W2PQY0 241 aa14.01□□□□□ -0.17
HIF3A-201ENST00000244302 POU5F1BQ06416 359 aa14.01□□□□□ -0.17
HIF3A-201ENST00000244302 ENOX2Q16206 610 aaKnown RBP14.01□□□□□ -0.17
HIF3A-201ENST00000244302 PHLDB3Q6NSJ2 640 aa14.01□□□□□ -0.17
HIF3A-201ENST00000244302 MPZL3Q6UWV2 235 aa14.01□□□□□ -0.17
HIF3A-201ENST00000244302 RAD9BQ6WBX8 426 aa14.01□□□□□ -0.17
HIF3A-201ENST00000244302 SV2AQ7L0J3 742 aa14.01□□□□□ -0.17
HIF3A-201ENST00000244302 RRAGAQ7L523 313 aa14.01□□□□□ -0.17
HIF3A-201ENST00000244302 LUC7L2Q9Y383 392 aaKnown RBP14.01□□□□□ -0.17
HIF3A-201ENST00000244302 NOC2LQ9Y3T9 749 aaKnown RBP14.01□□□□□ -0.17
HIF3A-201ENST00000244302 CDY2AQ9Y6F7 541 aa14.01□□□□□ -0.17
HIF3A-201ENST00000244302 LRRC53A6NM62 1247 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 CXCL8P10145 99 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 CCL5P13501 91 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 EIF4BP23588 611 aaKnown RBP14□□□□□ -0.17
HIF3A-201ENST00000244302 ARHGEF6Q15052 776 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 KLHDC7AQ5VTJ3 777 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 SLFN12LQ6IEE8 588 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 TRIM65Q6PJ69 517 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 TOGARAM2Q6ZUX3 1019 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 CATSPER4Q7RTX7 472 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 SERINC5Q86VE9 423 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 ARHGEF19Q8IW93 802 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 PCSK9Q8NBP7 692 aaKnown RBP14□□□□□ -0.17
HIF3A-201ENST00000244302 NEK11Q8NG66 645 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 BAG1Q99933 345 aaPredicted RBP14□□□□□ -0.17
HIF3A-201ENST00000244302 DESI2Q9BSY9 194 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 GCOM2Q9BZD3 368 aaPredicted RBP14□□□□□ -0.17
HIF3A-201ENST00000244302 TNFSF13BQ9Y275 285 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 A0A1B0GUA9 196 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 THPOP40225 353 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 PRMT2P55345 433 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 MYL7Q01449 175 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 ARID5AQ03989 594 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 FAM187BQ17R55 369 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 GBP6Q6ZN66 633 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 ZNF410Q86VK4 478 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 ZNF397Q8NF99 534 aaPredicted RBP14□□□□□ -0.17
HIF3A-201ENST00000244302 CELF4Q9BZC1 486 aaKnown RBP14□□□□□ -0.17
HIF3A-201ENST00000244302 AGO3Q9H9G7 860 aaKnown RBP14□□□□□ -0.17
HIF3A-201ENST00000244302 PAK6Q9NQU5 681 aaPredicted RBP14□□□□□ -0.17
HIF3A-201ENST00000244302 CPSF3Q9UKF6 684 aaKnown RBP14□□□□□ -0.17
HIF3A-201ENST00000244302 TFR2Q9UP52 801 aa14□□□□□ -0.17
HIF3A-201ENST00000244302 OGTO15294 1046 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms