RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 MTRQ99707 1265 aa11.69□□□□□ -0.54
COPA-201ENST00000241704 HSD3B7Q9H2F3 369 aa11.69□□□□□ -0.54
COPA-201ENST00000241704 NR3C2P08235 984 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 CHN1P15882 459 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 XPAP23025 273 aaPredicted RBP11.68□□□□□ -0.54
COPA-201ENST00000241704 TM4SF1P30408 202 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 FRMD5Q7Z6J6 570 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 LONP2Q86WA8 852 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 FAM81AQ8TBF8 368 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 ACER1Q8TDN7 264 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 RIT2Q99578 217 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 GCOM2Q9BZD3 368 aaPredicted RBP11.68□□□□□ -0.54
COPA-201ENST00000241704 ATP8B3O60423 1300 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 SPDYE16A6NNV3 312 aaPredicted RBP11.68□□□□□ -0.54
COPA-201ENST00000241704 STK25O00506 426 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 MAP3K7O43318 606 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 PPFIA2O75334 1257 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 PALMO75781 387 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 CD58P19256 250 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 MAPK4P31152 587 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 HSD17B3P37058 310 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 GCLMP48507 274 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 ZNF568Q3ZCX4 644 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 SPDYE2Q495Y8 402 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 HAUS6Q7Z4H7 955 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 SDCCAG8Q86SQ7 713 aaPredicted RBP11.68□□□□□ -0.54
COPA-201ENST00000241704 NME8Q8N427 588 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 LRRC8CQ8TDW0 803 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 AGAP11Q8TF27 550 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 MS4A14Q96JA4 679 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 DNAJC7Q99615 494 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 TIPINQ9BVW5 301 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 RRAGCQ9HB90 399 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 JPH1Q9HDC5 661 aaPredicted RBP11.68□□□□□ -0.54
COPA-201ENST00000241704 FAM217BQ9NTX9 383 aaPredicted RBP11.68□□□□□ -0.54
COPA-201ENST00000241704 LTN1O94822 1766 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 SNX1Q13596 522 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 ADAT2Q7Z6V5 191 aaKnown RBP11.68□□□□□ -0.54
COPA-201ENST00000241704 DNAJC9Q8WXX5 260 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 MRPL47Q9HD33 250 aaKnown RBP11.68□□□□□ -0.54
COPA-201ENST00000241704 KCND2Q9NZV8 630 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 SLC12A6Q9UHW9 1150 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 SH3BP1Q9Y3L3 701 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 USP15Q9Y4E8 981 aaPredicted RBP11.68□□□□□ -0.54
COPA-201ENST00000241704 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.68□□□□□ -0.54
COPA-201ENST00000241704 YWHABP31946 246 aaKnown RBP11.68□□□□□ -0.54
COPA-201ENST00000241704 MSH2P43246 934 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 STAT5BP51692 787 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 KIF2BQ8N4N8 673 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 MXRA8Q9BRK3 442 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 TMX2Q9Y320 296 aa11.68□□□□□ -0.54
COPA-201ENST00000241704 MGRN1O60291 552 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 SHMT1P34896 483 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 VAMP7P51809 220 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 COPS2P61201 443 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 FKBP1AP62942 108 aaKnown RBP11.67□□□□□ -0.54
COPA-201ENST00000241704 TNFAIP2Q03169 654 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 BFSP1Q12934 665 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 ITGB3BPQ13352 177 aaPredicted RBP11.67□□□□□ -0.54
COPA-201ENST00000241704 GMCL1P1Q8NEA9 526 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 OR6B3Q8NGW1 331 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 URGCPQ8TCY9 931 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 HAUS1Q96CS2 278 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 SMC6Q96SB8 1091 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 LACRTQ9GZZ8 138 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 GGT7Q9UJ14 662 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 NALCNQ8IZF0 1738 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 A6NJR5 290 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 PDE2AO00408 941 aaPredicted RBP11.67□□□□□ -0.54
COPA-201ENST00000241704 RARBP10826 455 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 TNFRSF8P28908 595 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 TPP2P29144 1249 aaPredicted RBP11.67□□□□□ -0.54
COPA-201ENST00000241704 FCGRTP55899 365 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 LACTB2Q53H82 288 aaPredicted RBP11.67□□□□□ -0.54
COPA-201ENST00000241704 ANKRD20A2Q5SQ80 823 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 DACT2Q5SW24 774 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 ANKRD20A1Q5TYW2 823 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 ANKRD20A3Q5VUR7 823 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 MOXD1Q6UVY6 613 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 MAP7D3Q8IWC1 876 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 SIX6OS1Q8N1H7 587 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 BBS5Q8N3I7 341 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 RNF139Q8WU17 664 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 CASKIN2Q8WXE0 1202 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 AGBL1Q96MI9 1066 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 IDI2Q9BXS1 227 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 C2orf40Q9H1Z8 148 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 NPHP3-ACAD11A0A0J9YXS1 232 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 GIPC1O14908 333 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 MAFGO15525 162 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 NMT1P30419 496 aaKnown RBP11.67□□□□□ -0.54
COPA-201ENST00000241704 SEPT6Q14141 434 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 ZNF667Q5HYK9 610 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 APOBEC3HQ6NTF7 200 aaKnown RBP11.67□□□□□ -0.54
COPA-201ENST00000241704 XRRA1Q6P2D8 792 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 EZH1Q92800 747 aaPredicted RBP11.67□□□□□ -0.54
COPA-201ENST00000241704 TATDN2Q93075 761 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 ATG4CQ96DT6 458 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 MRRFQ96E11 262 aaKnown RBP11.67□□□□□ -0.54
COPA-201ENST00000241704 RUNDC3BQ96NL0 473 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms