RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 R4GN57 208 aa2.55□□□□□ -2
PRKD3-201ENST00000234179 NRP1O14786 923 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 DHX15O43143 795 aaKnown RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 MARCH6O60337 910 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 CCNE2O96020 404 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 CYP21A2P08686 494 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 ZNF806P0C7X5 589 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 RPL17P18621 184 aaKnown RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 RPL9P32969 192 aaKnown RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 OR1G1P47890 313 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 CLCN3P51790 818 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 FAM187BQ17R55 369 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 TMEM266Q2M3C6 531 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 TTC22Q5TAA0 569 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 TCEAL8Q8IYN2 117 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 GPR152Q8TDT2 470 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 C2orf15Q8WU43 125 aaKnown RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 ZNF707Q96C28 371 aaPredicted RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 CEP295NLQ96MC4 621 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 TIPINQ9BVW5 301 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 EHD2Q9NZN4 543 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 SEPT9Q9UHD8 586 aaPredicted RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 CA14Q9ULX7 337 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 INPP5FQ9Y2H2 1132 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 DENND4AQ7Z401 1863 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 CNTNAP5Q8WYK1 1306 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 MYH6P13533 1939 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 EP300Q09472 2414 aaPredicted RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 IGLV3-22A0A075B6J6 115 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 DPYSL4O14531 572 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 CHADO15335 359 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 ZBTB24O43167 697 aaPredicted RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 EFEMP2O95967 443 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 C8AP07357 584 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 ARP10275 920 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 PSMC3P17980 439 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 POU5F1Q01860 360 aaKnown RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 TMEM62Q0P6H9 643 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 LMAN2Q12907 356 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 ZNF423Q2M1K9 1284 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 MTERF2Q49AM1 385 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 AASDHQ4L235 1098 aaPredicted RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 TSHZ3Q63HK5 1081 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 LRRC55Q6ZSA7 311 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 CYB5R4Q7L1T6 521 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 CRYGNQ8WXF5 182 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 RIN2Q8WYP3 895 aaPredicted RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 CNTNAP3BQ96NU0 1288 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 CNTNAP3Q9BZ76 1288 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 NUMBLQ9Y6R0 609 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 MYO7AQ13402 2215 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 KRBA1A5PL33 1030 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 OR6C75A6NL08 312 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 CHURC1-FNTBB4DL54 471 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 ZNF263O14978 683 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 SLC26A4O43511 780 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 GATMP50440 423 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 YARSP54577 528 aaKnown RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 PTENP60484 403 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 NOLC1Q14978 699 aaKnown RBP eCLIP2.54□□□□□ -2
PRKD3-201ENST00000234179 ZNF280DQ6N043 979 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 APOA5Q6Q788 366 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 TPRG1Q6ZUI0 275 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 GET4Q7L5D6 327 aaPredicted RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 SRBD1Q8N5C6 995 aaKnown RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 GAB3Q8WWW8 586 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 SMARCD2Q92925 531 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 DHX33Q9H6R0 707 aaKnown RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 TTC12Q9H892 705 aaPredicted RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 SH2B1Q9NRF2 756 aaPredicted RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 PKD2L1Q9P0L9 805 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 AFF4Q9UHB7 1163 aaKnown RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 EVLQ9UI08 416 aaPredicted RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 RBM8AQ9Y5S9 174 aaKnown RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 SPTBN4Q9H254 2564 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 NCOR2Q9Y618 2525 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 DDX11L8A8MPP1 907 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 ZBTB42B2RXF5 422 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 ATMINO43313 823 aaPredicted RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 SORBS3O60504 671 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 VTNP04004 478 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 CDK4P11802 303 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 IFNAR1P17181 557 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 CHMLP26374 656 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 ALDH1A3P47895 512 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 NR1H3Q13133 447 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 PTGDRQ13258 359 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 PDGFRLQ15198 375 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 JAKMIP3Q5VZ66 844 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 NUDT18Q6ZVK8 323 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 ZNF280BQ86YH2 543 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 C12orf76Q8N812 135 aaPredicted RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 SPATA18Q8TC71 538 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 PPP1R13LQ8WUF5 828 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 TMEM40Q8WWA1 233 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 KIF12Q96FN5 646 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 ZNF512Q96ME7 567 aaPredicted RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 MTRQ99707 1265 aa2.54□□□□□ -2
PRKD3-201ENST00000234179 CCDC94Q9BW85 323 aaPredicted RBP2.54□□□□□ -2
PRKD3-201ENST00000234179 APOL5Q9BWW9 433 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms