RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 TGFBIQ15582 683 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 NADK2Q4G0N4 442 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 FBXO31Q5XUX0 539 aaPredicted RBP13.85□□□□□ -0.19
MSH2-201ENST00000233146 ARL6IP4Q66PJ3 421 aaKnown RBP13.85□□□□□ -0.19
MSH2-201ENST00000233146 GIPC3Q8TF64 312 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 SPOCK2Q92563 424 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 NSL1Q96IY1 281 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 PHF12Q96QT6 1004 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 DRC3Q9H069 523 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 TAS2R1Q9NYW7 299 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 TRIM17Q9Y577 477 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 CTDP1Q9Y5B0 961 aaPredicted RBP13.85□□□□□ -0.19
MSH2-201ENST00000233146 A2ML1A8K2U0 1454 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 NPY5RQ15761 445 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 RASSF3Q86WH2 238 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 ANKK1Q8NFD2 765 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 CCPG1Q9ULG6 757 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 TTLL3Q9Y4R7 772 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 SPATA31A3Q5VYP0 1347 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 PRAMEF22A3QJZ6 481 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 CCDC160A6NGH7 325 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 FCER1AP12319 257 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 VCLP18206 1134 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 PLCB3Q01970 1234 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 TMEM266Q2M3C6 531 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 SYCE1Q8N0S2 351 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 FANCBQ8NB91 859 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 ART4Q93070 314 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 SELENONQ9NZV5 590 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 FAF1Q9UNN5 650 aaPredicted RBP13.84□□□□□ -0.19
MSH2-201ENST00000233146 DIS3Q9Y2L1 958 aaKnown RBP13.84□□□□□ -0.19
MSH2-201ENST00000233146 GIT1Q9Y2X7 761 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 ACTL7BQ9Y614 415 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 LMTK3Q96Q04 1460 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 ACEP12821 1306 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 AP2B1P63010 937 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 PDIA6Q15084 440 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 PDK3Q15120 406 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 KYNUQ16719 465 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 ZNF423Q2M1K9 1284 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 DCAF12L1Q5VU92 463 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 RAPH1Q70E73 1250 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 GET4Q7L5D6 327 aaPredicted RBP13.84□□□□□ -0.19
MSH2-201ENST00000233146 C4orf32Q8N8J7 132 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 COX4I2Q96KJ9 171 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 MYD88Q99836 296 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 PLGRKTQ9HBL7 147 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 ATAD3AQ9NVI7 634 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 LGALS13Q9UHV8 139 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 ITM2BQ9Y287 266 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.84□□□□□ -0.19
MSH2-201ENST00000233146 USP6P35125 1406 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 ARHGAP10A1A4S6 786 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 FUOMA2VDF0 154 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 TCEA3O75764 348 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 TTLL1O95922 423 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 RPL26P61254 145 aaKnown RBP13.84□□□□□ -0.19
MSH2-201ENST00000233146 MSLNQ13421 630 aaPredicted RBP13.84□□□□□ -0.19
MSH2-201ENST00000233146 MYLK3Q32MK0 819 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 TMEM214Q6NUQ4 689 aaKnown RBP13.84□□□□□ -0.19
MSH2-201ENST00000233146 RSPH3Q86UC2 560 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 EXOC8Q8IYI6 725 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 ARHGAP24Q8N264 748 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 ZNF398Q8TD17 642 aa13.84□□□□□ -0.19
MSH2-201ENST00000233146 METTL22Q9BUU2 404 aaPredicted RBP13.84□□□□□ -0.19
MSH2-201ENST00000233146 CDC42EP4Q9H3Q1 356 aaKnown RBP13.84□□□□□ -0.19
MSH2-201ENST00000233146 PODXLO00592 558 aa13.83□□□□□ -0.2
MSH2-201ENST00000233146 CLPTM1O96005 669 aa13.83□□□□□ -0.2
MSH2-201ENST00000233146 MCM7P33993 719 aa13.83□□□□□ -0.2
MSH2-201ENST00000233146 TRAPPC10P48553 1259 aa13.83□□□□□ -0.2
MSH2-201ENST00000233146 ARID5AQ03989 594 aa13.83□□□□□ -0.2
MSH2-201ENST00000233146 BORAQ6PGQ7 559 aa13.83□□□□□ -0.2
MSH2-201ENST00000233146 ADGRG6Q86SQ4 1221 aa13.83□□□□□ -0.2
MSH2-201ENST00000233146 SRBD1Q8N5C6 995 aaKnown RBP13.83□□□□□ -0.2
MSH2-201ENST00000233146 NEURL2Q9BR09 285 aa13.83□□□□□ -0.2
MSH2-201ENST00000233146 HGH1Q9BTY7 390 aa13.83□□□□□ -0.2
MSH2-201ENST00000233146 SENP6Q9GZR1 1112 aaPredicted RBP13.83□□□□□ -0.2
MSH2-201ENST00000233146 FAM47DPA6NHR8 397 aa13.83□□□□□ -0.2
MSH2-201ENST00000233146 RCAN1P53805 252 aa13.83□□□□□ -0.2
MSH2-201ENST00000233146 RAPGEF1Q13905 1077 aa13.83□□□□□ -0.2
MSH2-201ENST00000233146 TNIP1Q15025 636 aa13.83□□□□□ -0.2
MSH2-201ENST00000233146 SFT2D3Q587I9 215 aa13.83□□□□□ -0.2
MSH2-201ENST00000233146 DHRS4L2Q6PKH6 230 aa13.83□□□□□ -0.2
MSH2-201ENST00000233146 ADAT2Q7Z6V5 191 aaKnown RBP13.83□□□□□ -0.2
MSH2-201ENST00000233146 TTLL11Q8NHH1 800 aa13.83□□□□□ -0.2
MSH2-201ENST00000233146 LRRC15Q8TF66 581 aa13.83□□□□□ -0.2
MSH2-201ENST00000233146 NAPBQ9H115 298 aa13.83□□□□□ -0.2
MSH2-201ENST00000233146 UBN1Q9NPG3 1134 aa13.83□□□□□ -0.2
MSH2-201ENST00000233146 KIF13AQ9H1H9 1805 aa13.83□□□□□ -0.2
MSH2-201ENST00000233146 A0A0A6YYK5 440 aaPredicted RBP13.82□□□□□ -0.2
MSH2-201ENST00000233146 RASA4BC9J798 803 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 DDX3YO15523 660 aaKnown RBP13.82□□□□□ -0.2
MSH2-201ENST00000233146 RASA4O43374 803 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 DKC1O60832 514 aaKnown RBP eCLIP13.82□□□□□ -0.2
MSH2-201ENST00000233146 ACSL3O95573 720 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 CYP2C9P11712 490 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 NPEPPSP55786 919 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 NSUN2Q08J23 767 aaKnown RBP eCLIP13.82□□□□□ -0.2
MSH2-201ENST00000233146 ASIC2Q16515 512 aa13.82□□□□□ -0.2
MSH2-201ENST00000233146 C6orf183Q5T699 404 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms