RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 FGFR4P22455 802 aa12.21□□□□□ -0.45
LAMA4-201ENST00000230538 USP11P51784 963 aa12.21□□□□□ -0.45
LAMA4-201ENST00000230538 DUOXA2Q1HG44 320 aa12.21□□□□□ -0.45
LAMA4-201ENST00000230538 RFX8Q6ZV50 586 aa12.21□□□□□ -0.45
LAMA4-201ENST00000230538 ATXN7L3BQ96GX2 97 aa12.21□□□□□ -0.45
LAMA4-201ENST00000230538 ZDHHC9Q9Y397 364 aa12.21□□□□□ -0.45
LAMA4-201ENST00000230538 CROCC2H7BZ55 1655 aa12.21□□□□□ -0.45
LAMA4-201ENST00000230538 RALAP11233 206 aa12.21□□□□□ -0.45
LAMA4-201ENST00000230538 KCNA2P16389 499 aa12.21□□□□□ -0.45
LAMA4-201ENST00000230538 SPP2Q13103 211 aa12.21□□□□□ -0.45
LAMA4-201ENST00000230538 ZNF235Q14590 738 aa12.21□□□□□ -0.45
LAMA4-201ENST00000230538 MS4A14Q96JA4 679 aa12.21□□□□□ -0.45
LAMA4-201ENST00000230538 ZNF560Q96MR9 790 aa12.21□□□□□ -0.45
LAMA4-201ENST00000230538 PIDD1Q9HB75 910 aa12.21□□□□□ -0.45
LAMA4-201ENST00000230538 CCDC22O60826 627 aa12.21□□□□□ -0.45
LAMA4-201ENST00000230538 DAB2P98082 770 aa12.21□□□□□ -0.45
LAMA4-201ENST00000230538 NBPF10Q6P3W6 841 aaKnown RBP12.21□□□□□ -0.45
LAMA4-201ENST00000230538 MMS22LQ6ZRQ5 1243 aa12.21□□□□□ -0.45
LAMA4-201ENST00000230538 TAGAPQ8N103 731 aa12.21□□□□□ -0.45
LAMA4-201ENST00000230538 ARL8AQ96BM9 186 aa12.21□□□□□ -0.45
LAMA4-201ENST00000230538 RMDN1Q96DB5 314 aa12.21□□□□□ -0.45
LAMA4-201ENST00000230538 EPAS1Q99814 870 aa12.21□□□□□ -0.45
LAMA4-201ENST00000230538 ATP9BO43861 1147 aa12.21□□□□□ -0.46
LAMA4-201ENST00000230538 MAPRE2Q15555 327 aa12.21□□□□□ -0.46
LAMA4-201ENST00000230538 ANKRD40Q6AI12 368 aa12.21□□□□□ -0.46
LAMA4-201ENST00000230538 AGR3Q8TD06 166 aa12.21□□□□□ -0.46
LAMA4-201ENST00000230538 SH3TC2Q8TF17 1288 aa12.21□□□□□ -0.46
LAMA4-201ENST00000230538 SEPT8Q92599 483 aa12.21□□□□□ -0.46
LAMA4-201ENST00000230538 CELF1Q92879 486 aaKnown RBP12.21□□□□□ -0.46
LAMA4-201ENST00000230538 RTN2O75298 545 aa12.21□□□□□ -0.46
LAMA4-201ENST00000230538 EIF3EP60228 445 aaKnown RBP12.21□□□□□ -0.46
LAMA4-201ENST00000230538 ACTN3Q08043 901 aaPredicted RBP12.21□□□□□ -0.46
LAMA4-201ENST00000230538 PPHLN1Q8NEY8 458 aaKnown RBP12.21□□□□□ -0.46
LAMA4-201ENST00000230538 PRMT1Q99873 361 aaKnown RBP12.21□□□□□ -0.46
LAMA4-201ENST00000230538 MTA3Q9BTC8 594 aa12.21□□□□□ -0.46
LAMA4-201ENST00000230538 FBXL5Q9UKA1 691 aa12.21□□□□□ -0.46
LAMA4-201ENST00000230538 FOXO4P98177 505 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 CUL3Q13618 768 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 ALX1Q15699 326 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 THEMIS2Q5TEJ8 643 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 PID1Q7Z2X4 250 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 STAG2Q8N3U4 1231 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 DPF2Q92785 391 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 ETNK1Q9HBU6 452 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 SULT1E1P49888 294 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 ZCCHC17Q9NP64 241 aaKnown RBP12.2□□□□□ -0.46
LAMA4-201ENST00000230538 A0A1W2PQC6 194 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 GSG1L2A8MUP6 293 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 CHUKO15111 745 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 ZSCAN9O15535 394 aaPredicted RBP12.2□□□□□ -0.46
LAMA4-201ENST00000230538 MAN1A2O60476 641 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 YWHABP31946 246 aaKnown RBP12.2□□□□□ -0.46
LAMA4-201ENST00000230538 HDAC4P56524 1084 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 ATP2C1P98194 919 aaPredicted RBP12.2□□□□□ -0.46
LAMA4-201ENST00000230538 ANKMY2Q8IV38 441 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 PARP9Q8IXQ6 854 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 KDM4CQ9H3R0 1056 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 ZNF189O75820 626 aaPredicted RBP12.2□□□□□ -0.46
LAMA4-201ENST00000230538 OCM2P0CE71 109 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 OCMP0CE72 109 aaPredicted RBP12.2□□□□□ -0.46
LAMA4-201ENST00000230538 HSPA9P38646 679 aaKnown RBP12.2□□□□□ -0.46
LAMA4-201ENST00000230538 CDK17Q00537 523 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 HIF1AQ16665 826 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 ACBD5Q5T8D3 534 aaPredicted RBP12.2□□□□□ -0.46
LAMA4-201ENST00000230538 PATL1Q86TB9 770 aaKnown RBP12.2□□□□□ -0.46
LAMA4-201ENST00000230538 TUFT1Q9NNX1 390 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 PRDM5Q9NQX1 630 aaPredicted RBP12.2□□□□□ -0.46
LAMA4-201ENST00000230538 AIPL1Q9NZN9 384 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 PLA2R1Q13018 1463 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 CYP27B1O15528 508 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 CYP26A1O43174 497 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 MFSD14CQ5VZR4 134 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 HAUS6Q7Z4H7 955 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 CATSPER3Q86XQ3 398 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 HPS3Q969F9 1004 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 PGBD4Q96DM1 585 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 OTUD5Q96G74 571 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 KCNF1Q9H3M0 494 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 RPAP3Q9H6T3 665 aaPredicted RBP12.2□□□□□ -0.46
LAMA4-201ENST00000230538 PLEKHA5Q9HAU0 1116 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 KLHL11Q9NVR0 708 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 SPHKAPQ2M3C7 1700 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 SLC1A1P43005 524 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 RAD51Q06609 339 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 CACNB2Q08289 660 aaPredicted RBP12.2□□□□□ -0.46
LAMA4-201ENST00000230538 SEMA3FQ13275 785 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 GRAMD1AQ96CP6 724 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 WDR24Q96S15 920 aa12.2□□□□□ -0.46
LAMA4-201ENST00000230538 MAP3K20Q9NYL2 800 aaKnown RBP12.2□□□□□ -0.46
LAMA4-201ENST00000230538 CDV3Q9UKY7 258 aaKnown RBP12.2□□□□□ -0.46
LAMA4-201ENST00000230538 IQGAP3Q86VI3 1631 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 KCNN4O15554 427 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 EYA4O95677 639 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 DYRK4Q9NR20 520 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 TJP2Q9UDY2 1190 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 PCDHA10Q9Y5I2 948 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 ADGRL3Q9HAR2 1447 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 SETD1BQ9UPS6 1966 aaKnown RBP12.19□□□□□ -0.46
LAMA4-201ENST00000230538 GRIK1P39086 918 aa12.19□□□□□ -0.46
LAMA4-201ENST00000230538 EPHA7Q15375 998 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms