RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 FAM129AQ9BZQ8 928 aa6.08□□□□□ -1.44
RFX4-201ENST00000229387 ALDH8A1Q9H2A2 487 aaPredicted RBP6.08□□□□□ -1.44
RFX4-201ENST00000229387 INTS13Q9NVM9 706 aa6.08□□□□□ -1.44
RFX4-201ENST00000229387 MAP3K20Q9NYL2 800 aaKnown RBP6.08□□□□□ -1.44
RFX4-201ENST00000229387 ZMYND8Q9ULU4 1186 aaPredicted RBP6.08□□□□□ -1.44
RFX4-201ENST00000229387 DCCP43146 1447 aa6.08□□□□□ -1.44
RFX4-201ENST00000229387 A0A1W2PQ27 194 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 A0A1W2PQ64 194 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 A0A1W2PQD8 194 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 SH3PXD2BA1X283 911 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 UBAP1LF5GYI3 381 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 CDK2AP1O14519 115 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 ZFYP08048 801 aaPredicted RBP6.07□□□□□ -1.44
RFX4-201ENST00000229387 COL6A2P12110 1019 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 VEGFAP15692 232 aaPredicted RBP6.07□□□□□ -1.44
RFX4-201ENST00000229387 BTF3P20290 206 aaKnown RBP6.07□□□□□ -1.44
RFX4-201ENST00000229387 PPP2R2AP63151 447 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 PFKPQ01813 784 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 PNOCQ13519 176 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 TMEM214Q6NUQ4 689 aaKnown RBP6.07□□□□□ -1.44
RFX4-201ENST00000229387 KLHL35Q6PF15 583 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 RAD9BQ6WBX8 426 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 TAOK1Q7L7X3 1001 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 PATL1Q86TB9 770 aaKnown RBP6.07□□□□□ -1.44
RFX4-201ENST00000229387 GSPT2Q8IYD1 628 aaKnown RBP6.07□□□□□ -1.44
RFX4-201ENST00000229387 PPFIBP2Q8ND30 876 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 PIGOQ8TEQ8 1089 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 KLHL29Q96CT2 875 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 ZNF274Q96GC6 653 aaPredicted RBP6.07□□□□□ -1.44
RFX4-201ENST00000229387 PBKQ96KB5 322 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 PPP1R10Q96QC0 940 aaKnown RBP6.07□□□□□ -1.44
RFX4-201ENST00000229387 XPO6Q96QU8 1125 aaKnown RBP6.07□□□□□ -1.44
RFX4-201ENST00000229387 CRNKL1Q9BZJ0 848 aaKnown RBP6.07□□□□□ -1.44
RFX4-201ENST00000229387 TGIF2Q9GZN2 237 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 MUC3BQ9H195 1237 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 CPVLQ9H3G5 476 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 CCDC134Q9H6E4 229 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 METTL5Q9NRN9 209 aaKnown RBP6.07□□□□□ -1.44
RFX4-201ENST00000229387 MRC1P22897 1456 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 COL18A1P39060 1754 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 A0A0B4J203 849 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 NOTOA8MTQ0 251 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 ATP9AO75110 1047 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 TFRCP02786 760 aaKnown RBP6.07□□□□□ -1.44
RFX4-201ENST00000229387 CHRNB1P11230 501 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 ATP1A3P13637 1013 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 SERPINB3P29508 390 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 HMOX2P30519 316 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 ERMARDQ5T6L9 678 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 FIP1L1Q6UN15 594 aaKnown RBP6.07□□□□□ -1.44
RFX4-201ENST00000229387 USP49Q70CQ1 688 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 MAEAQ7L5Y9 396 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 EIF1ADQ8N9N8 165 aaKnown RBP6.07□□□□□ -1.44
RFX4-201ENST00000229387 LINC00301Q8NCQ3 95 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 TNIP2Q8NFZ5 429 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 GSDMBQ8TAX9 411 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 CDKL2Q92772 493 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 DGCR14Q96DF8 476 aaKnown RBP6.07□□□□□ -1.44
RFX4-201ENST00000229387 CEP44Q9C0F1 390 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 PSTPIP2Q9H939 334 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 VTA1Q9NP79 307 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 VPS54Q9P1Q0 977 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 STOML1Q9UBI4 398 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 TRIM17Q9Y577 477 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 SCN11AQ9UI33 1791 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 SPATA31A1Q5TZJ5 1347 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 TCRBV5S4A2TA0A5A2 114 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 ANO9A1A5B4 782 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 C19orf67A6NJJ6 358 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 A8MUI8 341 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 PITPNM1O00562 1244 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 SH2B2O14492 632 aaPredicted RBP6.07□□□□□ -1.44
RFX4-201ENST00000229387 NTSR2O95665 410 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 CTRB1P17538 263 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 ATP5DP30049 168 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 CETN2P41208 172 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 AP3M2P53677 418 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 RASSF7Q02833 373 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 RCN2Q14257 317 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 C6orf183Q5T699 404 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 CTRB2Q6GPI1 263 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 LRRC8BQ6P9F7 803 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 B3GNT6Q6ZMB0 384 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 SLC51BQ86UW2 128 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 LSMEM1Q8N8F7 131 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 PTCD2Q8WV60 388 aaKnown RBP6.07□□□□□ -1.44
RFX4-201ENST00000229387 ATL1Q8WXF7 558 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 SGCDQ92629 289 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 GIMAP5Q96F15 307 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 TMEM237Q96Q45 408 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 ERP44Q9BS26 406 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 UNKQ9C0B0 810 aaKnown RBP6.07□□□□□ -1.44
RFX4-201ENST00000229387 PLCB1Q9NQ66 1216 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 SCAF8Q9UPN6 1271 aaKnown RBP6.07□□□□□ -1.44
RFX4-201ENST00000229387 PLAAQ9Y263 795 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 USH1CQ9Y6N9 552 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 CACNA1FO60840 1977 aa6.07□□□□□ -1.44
RFX4-201ENST00000229387 PHRF1Q9P1Y6 1649 aaKnown RBP6.06□□□□□ -1.44
RFX4-201ENST00000229387 MROH7-TTC4A0A0A0MT08 1334 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms