RNA–Protein interactions for RNA: ENST00000228425.10

PPFIBP1-201, Transcript of PPFIA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPFIBP1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-201ENST00000228425 TRAF3IP3Q9Y228 551 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 NFE2L3Q9Y4A8 694 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 FRMPD2Q68DX3 1309 aaPredicted RBP6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 KCNQ3O43525 872 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 SERPIND1P05546 499 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 STAT1P42224 750 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 NT5C2P49902 561 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 SNCBQ16143 134 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 MCTP2Q6DN12 878 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 OOSP2Q86WS3 158 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 LRRC8AQ8IWT6 810 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 FAM9CQ8IZT9 166 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 KRT78Q8N1N4 520 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 ZSCAN18Q8TBC5 510 aaPredicted RBP6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 VPS39Q96JC1 886 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 LSM14BQ9BX40 385 aaKnown RBP6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 TSSK1BQ9BXA7 367 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 TEKT3Q9BXF9 490 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 TRIM54Q9BYV2 358 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 KLC2Q9H0B6 622 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 PARVGQ9HBI0 331 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 DDX25Q9UHL0 483 aaKnown RBP6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 AP1M2Q9Y6Q5 423 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 COL4A1P02462 1669 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 NUP188Q5SRE5 1749 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 ADCY9O60503 1353 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 PDE8AO60658 829 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 POLR2MP0CAP2 368 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 EIF4BP23588 611 aaKnown RBP6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 HOXD10P28358 340 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 ZNF132P52740 706 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 SLC39A14Q15043 492 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 AOC3Q16853 763 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 LVRNQ6Q4G3 990 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 C11orf74Q86VG3 221 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 TRIML2Q8N7C3 387 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 NSUN7Q8NE18 718 aaKnown RBP6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 ST13P5Q8NFI4 369 aaPredicted RBP6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 DEPDC1BQ8WUY9 529 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 MKL1Q969V6 931 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 YIPF4Q9BSR8 244 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 NT5C3AQ9H0P0 336 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 RPAP3Q9H6T3 665 aaPredicted RBP6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 PALMDQ9NP74 551 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 SPTLC3Q9NUV7 552 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 SNTG2Q9NY99 539 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 AIPL1Q9NZN9 384 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 H2AFY2Q9P0M6 372 aaPredicted RBP6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 WARS2Q9UGM6 360 aaKnown RBP6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 TNRC18O15417 2968 aaPredicted RBP6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 CRB1P82279 1406 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 PEX1O43933 1283 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 INMTO95050 263 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 PCCAP05165 728 aaPredicted RBP6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 THEGLP0DJG4 465 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 DLATP10515 647 aaKnown RBP6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 PDIA3P30101 505 aaKnown RBP6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 MYO1EQ12965 1108 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 CEP78Q5JTW2 689 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 TMC4Q7Z404 712 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 PDCD6IPQ8WUM4 868 aaKnown RBP6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 HDAC2Q92769 488 aaKnown RBP6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 USP7Q93009 1102 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 CNKSR1Q969H4 720 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 TIFAQ96CG3 184 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 PCDHB4Q9Y5E5 795 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 TJP1Q07157 1748 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 RTCAO00442 366 aaKnown RBP6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 CFLARO15519 480 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 MED7O43513 233 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 TOM1L1O75674 476 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 COX10Q12887 443 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 ZNF568Q3ZCX4 644 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 POTEEQ6S8J3 1075 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 CCDC84Q86UT8 332 aaPredicted RBP6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 RNPC3Q96LT9 517 aaKnown RBP6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 NIF3L1Q9GZT8 377 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 CARD9Q9H257 536 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 STN1Q9H668 368 aaKnown RBP6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 CLIC5Q9NZA1 410 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 PCDHA7Q9UN72 937 aa6.31□□□□□ -1.4
PPFIBP1-201ENST00000228425 C5orf58C9J3I9 102 aa6.3□□□□□ -1.4
PPFIBP1-201ENST00000228425 E5RI56 91 aa6.3□□□□□ -1.4
PPFIBP1-201ENST00000228425 MCF2LO15068 1137 aa6.3□□□□□ -1.4
PPFIBP1-201ENST00000228425 ICMTO60725 284 aa6.3□□□□□ -1.4
PPFIBP1-201ENST00000228425 WDR47O94967 919 aa6.3□□□□□ -1.4
PPFIBP1-201ENST00000228425 PCP11498 1178 aaKnown RBP6.3□□□□□ -1.4
PPFIBP1-201ENST00000228425 NUBP1P53384 320 aa6.3□□□□□ -1.4
PPFIBP1-201ENST00000228425 HDAC4P56524 1084 aa6.3□□□□□ -1.4
PPFIBP1-201ENST00000228425 IRX1P78414 480 aaPredicted RBP6.3□□□□□ -1.4
PPFIBP1-201ENST00000228425 TMPRSS15P98073 1019 aa6.3□□□□□ -1.4
PPFIBP1-201ENST00000228425 TBL3Q12788 808 aaKnown RBP6.3□□□□□ -1.4
PPFIBP1-201ENST00000228425 RESTQ13127 1097 aa6.3□□□□□ -1.4
PPFIBP1-201ENST00000228425 TTC23Q5W5X9 447 aa6.3□□□□□ -1.4
PPFIBP1-201ENST00000228425 RWDD4Q6NW29 188 aaKnown RBP6.3□□□□□ -1.4
PPFIBP1-201ENST00000228425 CFAP161Q6P656 301 aa6.3□□□□□ -1.4
PPFIBP1-201ENST00000228425 NANOGNBQ7Z5D8 188 aa6.3□□□□□ -1.4
PPFIBP1-201ENST00000228425 ING2Q9H160 280 aa6.3□□□□□ -1.4
PPFIBP1-201ENST00000228425 METTL5Q9NRN9 209 aaKnown RBP6.3□□□□□ -1.4
PPFIBP1-201ENST00000228425 AFF4Q9UHB7 1163 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms