RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 CROCCP2Q86T23 111 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 REPS2Q8NFH8 660 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 CCDC127Q96BQ5 260 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 C12orf42Q96LP6 360 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 NUP85Q9BW27 656 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 TAOK3Q9H2K8 898 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 GGA2Q9UJY4 613 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 TMEM110-MUSTN1A8MSY1 372 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 MMEP08473 750 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 KCNA2P16389 499 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 TGFB2P61812 414 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 SLC39A4Q6P5W5 647 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 SCYL3Q8IZE3 742 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 PRELID2Q8N945 189 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 PPM1EQ8WY54 764 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 BSNDQ8WZ55 320 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 POMGNT1Q8WZA1 660 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 DHX38Q92620 1227 aaKnown RBP23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 KRT35Q92764 455 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 ZNF653Q96CK0 615 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 IFT74Q96LB3 600 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 ZNF112Q9UJU3 913 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 ADAMTS5Q9UNA0 930 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 BCS1LQ9Y276 419 aa23.61■■□□□ 1.37
SMARCD2-201ENST00000225742 NUDT17P0C025 328 aa23.6■■□□□ 1.37
SMARCD2-201ENST00000225742 GUCY1A3Q02108 690 aa23.6■■□□□ 1.37
SMARCD2-201ENST00000225742 MICALCLQ6ZW33 695 aa23.6■■□□□ 1.37
SMARCD2-201ENST00000225742 HOOK3Q86VS8 718 aa23.6■■□□□ 1.37
SMARCD2-201ENST00000225742 MAGOHBQ96A72 148 aaKnown RBP23.6■■□□□ 1.37
SMARCD2-201ENST00000225742 PLVAPQ9BX97 442 aa23.6■■□□□ 1.37
SMARCD2-201ENST00000225742 ATP6V0A4Q9HBG4 840 aa23.6■■□□□ 1.37
SMARCD2-201ENST00000225742 PHIPQ8WWQ0 1821 aa23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 ATP2A1O14983 1001 aa23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 DGKZQ13574 1117 aa23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 ZNF677Q86XU0 584 aa23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 SLC13A5Q86YT5 568 aaPredicted RBP23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 C12orf50Q8NA57 414 aaPredicted RBP23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 OR2W6PQ8NHA6 318 aa23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 TAS1R2Q8TE23 839 aa23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 DDX1Q92499 740 aaKnown RBP23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 FAM169AQ9Y6X4 670 aa23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 SPOPO43791 374 aa23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 ZNF862O60290 1169 aa23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 DSG3P32926 999 aa23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 FNTAP49354 379 aa23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 CDR1P51861 262 aa23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 RWDD2BP57060 319 aa23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 PPP2R2AP63151 447 aa23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 CLEC16AQ2KHT3 1053 aa23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 SV2AQ7L0J3 742 aa23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 ZNF280CQ8ND82 737 aa23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 TRIM11Q96F44 468 aa23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 KIFC3Q9BVG8 833 aa23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 CENPHQ9H3R5 247 aa23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 MTRF1LQ9UGC7 380 aaKnown RBP23.59■■□□□ 1.37
SMARCD2-201ENST00000225742 RLFQ13129 1914 aa23.58■■□□□ 1.37
SMARCD2-201ENST00000225742 C19orf81C9J6K1 198 aa23.58■■□□□ 1.37
SMARCD2-201ENST00000225742 MYBL1P10243 752 aa23.58■■□□□ 1.37
SMARCD2-201ENST00000225742 BPIFB4P59827 614 aa23.58■■□□□ 1.37
SMARCD2-201ENST00000225742 ADAT2Q7Z6V5 191 aaKnown RBP23.58■■□□□ 1.37
SMARCD2-201ENST00000225742 GLG1Q92896 1179 aa23.58■■□□□ 1.37
SMARCD2-201ENST00000225742 TRIM31Q9BZY9 425 aa23.58■■□□□ 1.37
SMARCD2-201ENST00000225742 PABPC3Q9H361 631 aaKnown RBP23.58■■□□□ 1.37
SMARCD2-201ENST00000225742 CNOT10Q9H9A5 744 aaKnown RBP23.58■■□□□ 1.37
SMARCD2-201ENST00000225742 JPH1Q9HDC5 661 aaPredicted RBP23.58■■□□□ 1.37
SMARCD2-201ENST00000225742 AVENQ9NQS1 362 aaPredicted RBP23.58■■□□□ 1.37
SMARCD2-201ENST00000225742 ARHGAP28Q9P2N2 729 aa23.58■■□□□ 1.37
SMARCD2-201ENST00000225742 RIPK3Q9Y572 518 aa23.58■■□□□ 1.37
SMARCD2-201ENST00000225742 KIAA1217Q5T5P2 1943 aa23.58■■□□□ 1.36
SMARCD2-201ENST00000225742 EXTL3O43909 919 aa23.57■■□□□ 1.36
SMARCD2-201ENST00000225742 MARCKSL1P49006 195 aa23.57■■□□□ 1.36
SMARCD2-201ENST00000225742 PMS2P54278 862 aa23.57■■□□□ 1.36
SMARCD2-201ENST00000225742 CLDN10P78369 228 aa23.57■■□□□ 1.36
SMARCD2-201ENST00000225742 IFFO1Q0D2I5 559 aa23.57■■□□□ 1.36
SMARCD2-201ENST00000225742 KRT71Q3SY84 523 aa23.57■■□□□ 1.36
SMARCD2-201ENST00000225742 SNRNP48Q6IEG0 339 aaKnown RBP23.57■■□□□ 1.36
SMARCD2-201ENST00000225742 ZDHHC24Q6UX98 284 aa23.57■■□□□ 1.36
SMARCD2-201ENST00000225742 C15orf39Q6ZRI6 1047 aa23.57■■□□□ 1.36
SMARCD2-201ENST00000225742 NLRP14Q86W24 1093 aa23.57■■□□□ 1.36
SMARCD2-201ENST00000225742 PDGFDQ9GZP0 370 aaPredicted RBP23.57■■□□□ 1.36
SMARCD2-201ENST00000225742 PICK1Q9NRD5 415 aa23.57■■□□□ 1.36
SMARCD2-201ENST00000225742 SLC9A2Q9UBY0 812 aa23.57■■□□□ 1.36
SMARCD2-201ENST00000225742 SLC12A6Q9UHW9 1150 aa23.57■■□□□ 1.36
SMARCD2-201ENST00000225742 CNOT7Q9UIV1 285 aaKnown RBP23.57■■□□□ 1.36
SMARCD2-201ENST00000225742 ATP8A1Q9Y2Q0 1164 aa23.57■■□□□ 1.36
SMARCD2-201ENST00000225742 HNRNPDLO14979 420 aaKnown RBP23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 GRIN3BO60391 1043 aa23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 FAM107AO95990 144 aa23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 CPP00450 1065 aa23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 PAEPP09466 180 aa23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 PYGMP11217 842 aa23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 GNPTABQ3T906 1256 aa23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 DALRD3Q5D0E6 543 aaKnown RBP23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 SWSAP1Q6NVH7 229 aa23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 MIS18BP1Q6P0N0 1132 aa23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 CCDC137Q6PK04 289 aaKnown RBP23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 CYFIP1Q7L576 1253 aa23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 MAIP1Q8WWC4 291 aa23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 TLCD1Q96CP7 247 aa23.56■■□□□ 1.36
SMARCD2-201ENST00000225742 POP1Q99575 1024 aaKnown RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms