RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 PHF24Q9UPV7 400 aa19.6■□□□□ 0.73
CBX1-201ENST00000225603 ZNF233A6NK53 670 aa19.59■□□□□ 0.73
CBX1-201ENST00000225603 EIF4BP23588 611 aaKnown RBP19.59■□□□□ 0.73
CBX1-201ENST00000225603 CASP14P31944 242 aa19.59■□□□□ 0.73
CBX1-201ENST00000225603 TNFSF9P41273 254 aa19.59■□□□□ 0.73
CBX1-201ENST00000225603 MCCD1P59942 119 aaPredicted RBP19.59■□□□□ 0.73
CBX1-201ENST00000225603 FAM84AQ96KN4 292 aa19.59■□□□□ 0.73
CBX1-201ENST00000225603 PCMTD1Q96MG8 357 aaPredicted RBP19.59■□□□□ 0.73
CBX1-201ENST00000225603 PDZD7Q9H5P4 517 aa19.59■□□□□ 0.73
CBX1-201ENST00000225603 FMO5P49326 533 aa19.59■□□□□ 0.73
CBX1-201ENST00000225603 ZNF568Q3ZCX4 644 aa19.59■□□□□ 0.73
CBX1-201ENST00000225603 CEP120Q8N960 986 aa19.59■□□□□ 0.73
CBX1-201ENST00000225603 PARD3BQ8TEW8 1205 aa19.59■□□□□ 0.73
CBX1-201ENST00000225603 CDT1Q9H211 546 aa19.59■□□□□ 0.73
CBX1-201ENST00000225603 TOPORSQ9NS56 1045 aaPredicted RBP19.59■□□□□ 0.73
CBX1-201ENST00000225603 FAM207AQ9NSI2 230 aaPredicted RBP19.59■□□□□ 0.73
CBX1-201ENST00000225603 LRRIQ3A6PVS8 624 aaPredicted RBP19.58■□□□□ 0.73
CBX1-201ENST00000225603 KIAA0391O15091 583 aaKnown RBP19.58■□□□□ 0.73
CBX1-201ENST00000225603 CTSHP09668 335 aa19.58■□□□□ 0.73
CBX1-201ENST00000225603 HOXA11P31270 313 aaPredicted RBP19.58■□□□□ 0.73
CBX1-201ENST00000225603 MRPS6P82932 125 aaKnown RBP19.58■□□□□ 0.73
CBX1-201ENST00000225603 TRIM65Q6PJ69 517 aa19.58■□□□□ 0.73
CBX1-201ENST00000225603 TOGARAM2Q6ZUX3 1019 aa19.58■□□□□ 0.73
CBX1-201ENST00000225603 DHX38Q92620 1227 aaKnown RBP19.58■□□□□ 0.73
CBX1-201ENST00000225603 CELF4Q9BZC1 486 aaKnown RBP19.58■□□□□ 0.73
CBX1-201ENST00000225603 TTYH3Q9C0H2 523 aa19.58■□□□□ 0.73
CBX1-201ENST00000225603 L2HGDHQ9H9P8 463 aa19.58■□□□□ 0.73
CBX1-201ENST00000225603 STARD7Q9NQZ5 370 aa19.58■□□□□ 0.73
CBX1-201ENST00000225603 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.58■□□□□ 0.731e-8■□□□□ 8.9
CBX1-201ENST00000225603 CDY2AQ9Y6F7 541 aa19.58■□□□□ 0.73
CBX1-201ENST00000225603 TTC26A0AVF1 554 aa19.57■□□□□ 0.72
CBX1-201ENST00000225603 KBTBD13C9JR72 458 aa19.57■□□□□ 0.72
CBX1-201ENST00000225603 ERLIN2O94905 339 aa19.57■□□□□ 0.72
CBX1-201ENST00000225603 CHRNA1P02708 482 aa19.57■□□□□ 0.72
CBX1-201ENST00000225603 HSPA1AP0DMV8 641 aaKnown RBP19.57■□□□□ 0.72
CBX1-201ENST00000225603 HSPA1BP0DMV9 641 aaKnown RBP19.57■□□□□ 0.72
CBX1-201ENST00000225603 GCLMP48507 274 aa19.57■□□□□ 0.72
CBX1-201ENST00000225603 CRYBB1P53674 252 aaPredicted RBP19.57■□□□□ 0.72
CBX1-201ENST00000225603 DPY19L2P1Q6NXN4 242 aa19.57■□□□□ 0.72
CBX1-201ENST00000225603 CATSPER4Q7RTX7 472 aa19.57■□□□□ 0.72
CBX1-201ENST00000225603 SLC43A3Q8NBI5 491 aa19.57■□□□□ 0.72
CBX1-201ENST00000225603 TRPV6Q9H1D0 765 aa19.57■□□□□ 0.72
CBX1-201ENST00000225603 KIAA1586Q9HCI6 787 aa19.57■□□□□ 0.72
CBX1-201ENST00000225603 OGDHLQ9ULD0 1010 aa19.57■□□□□ 0.72
CBX1-201ENST00000225603 A0A1B0GUA9 196 aa19.57■□□□□ 0.72
CBX1-201ENST00000225603 OGTO15294 1046 aa19.57■□□□□ 0.72
CBX1-201ENST00000225603 MFAP3LO75121 409 aa19.57■□□□□ 0.72
CBX1-201ENST00000225603 SLC9A1P19634 815 aa19.57■□□□□ 0.72
CBX1-201ENST00000225603 TMEM192Q8IY95 271 aa19.57■□□□□ 0.72
CBX1-201ENST00000225603 THNSL1Q8IYQ7 743 aa19.57■□□□□ 0.72
CBX1-201ENST00000225603 TMC2Q8TDI7 906 aa19.57■□□□□ 0.72
CBX1-201ENST00000225603 OSBPL7Q9BZF2 842 aa19.57■□□□□ 0.72
CBX1-201ENST00000225603 PDE11AQ9HCR9 933 aa19.57■□□□□ 0.72
CBX1-201ENST00000225603 GOLGA6L9A6NEM1 432 aa19.56■□□□□ 0.72
CBX1-201ENST00000225603 DNM1LO00429 736 aa19.56■□□□□ 0.72
CBX1-201ENST00000225603 NOL4O94818 638 aa19.56■□□□□ 0.72
CBX1-201ENST00000225603 LDHAP00338 332 aaKnown RBP19.56■□□□□ 0.72
CBX1-201ENST00000225603 DLATP10515 647 aaKnown RBP19.56■□□□□ 0.72
CBX1-201ENST00000225603 ACTN1P12814 892 aa19.56■□□□□ 0.72
CBX1-201ENST00000225603 OSTNP61366 133 aa19.56■□□□□ 0.72
CBX1-201ENST00000225603 FBXO46Q6PJ61 603 aaPredicted RBP19.56■□□□□ 0.72
CBX1-201ENST00000225603 ZNF333Q96JL9 665 aa19.56■□□□□ 0.72
CBX1-201ENST00000225603 LSM14BQ9BX40 385 aaKnown RBP19.56■□□□□ 0.72
CBX1-201ENST00000225603 NAA15Q9BXJ9 866 aaKnown RBP19.56■□□□□ 0.72
CBX1-201ENST00000225603 AGPAT5Q9NUQ2 364 aa19.56■□□□□ 0.72
CBX1-201ENST00000225603 RBAKQ9NYW8 714 aaPredicted RBP19.56■□□□□ 0.72
CBX1-201ENST00000225603 LRRN2O75325 713 aa19.56■□□□□ 0.72
CBX1-201ENST00000225603 SLU7O95391 586 aaKnown RBP19.56■□□□□ 0.72
CBX1-201ENST00000225603 TRIM21P19474 475 aaKnown RBP19.56■□□□□ 0.72
CBX1-201ENST00000225603 PON1P27169 355 aa19.56■□□□□ 0.72
CBX1-201ENST00000225603 THPOP40225 353 aa19.56■□□□□ 0.72
CBX1-201ENST00000225603 PTPN11Q06124 597 aaPredicted RBP19.56■□□□□ 0.72
CBX1-201ENST00000225603 NAA30Q147X3 362 aaPredicted RBP19.56■□□□□ 0.72
CBX1-201ENST00000225603 PSMD6Q15008 389 aa19.56■□□□□ 0.72
CBX1-201ENST00000225603 LMBRD2Q68DH5 695 aaPredicted RBP19.56■□□□□ 0.72
CBX1-201ENST00000225603 RPAINQ86UA6 219 aa19.56■□□□□ 0.72
CBX1-201ENST00000225603 ZNF516Q92618 1163 aa19.56■□□□□ 0.72
CBX1-201ENST00000225603 TMEM117Q9H0C3 514 aa19.56■□□□□ 0.72
CBX1-201ENST00000225603 DNAI1Q9UI46 699 aa19.56■□□□□ 0.72
CBX1-201ENST00000225603 CPSF3Q9UKF6 684 aaKnown RBP19.56■□□□□ 0.72
CBX1-201ENST00000225603 NOC2LQ9Y3T9 749 aaKnown RBP19.56■□□□□ 0.72
CBX1-201ENST00000225603 TRPV2Q9Y5S1 764 aa19.56■□□□□ 0.72
CBX1-201ENST00000225603 PTPRJQ12913 1337 aa19.55■□□□□ 0.72
CBX1-201ENST00000225603 B4GALT4O60513 344 aa19.55■□□□□ 0.72
CBX1-201ENST00000225603 MGAT3Q09327 533 aa19.55■□□□□ 0.72
CBX1-201ENST00000225603 EXOC3L4Q17RC7 722 aa19.55■□□□□ 0.72
CBX1-201ENST00000225603 TRIM71Q2Q1W2 868 aaKnown RBP19.55■□□□□ 0.72
CBX1-201ENST00000225603 RSPH3Q86UC2 560 aa19.55■□□□□ 0.72
CBX1-201ENST00000225603 CNGA4Q8IV77 575 aa19.55■□□□□ 0.72
CBX1-201ENST00000225603 PDCL2Q8N4E4 241 aa19.55■□□□□ 0.72
CBX1-201ENST00000225603 SENP6Q9GZR1 1112 aaPredicted RBP19.55■□□□□ 0.72
CBX1-201ENST00000225603 A0A0U1RQG5 324 aaPredicted RBP19.55■□□□□ 0.72
CBX1-201ENST00000225603 MYL7Q01449 175 aa19.55■□□□□ 0.72
CBX1-201ENST00000225603 GBP6Q6ZN66 633 aa19.55■□□□□ 0.72
CBX1-201ENST00000225603 CCDC51Q96ER9 411 aa19.55■□□□□ 0.72
CBX1-201ENST00000225603 GCNT4Q9P109 453 aa19.55■□□□□ 0.72
CBX1-201ENST00000225603 CAPN11Q9UMQ6 739 aa19.55■□□□□ 0.72
CBX1-201ENST00000225603 NOD1Q9Y239 953 aa19.55■□□□□ 0.72
CBX1-201ENST00000225603 SOWAHDA6NJG2 315 aa19.54■□□□□ 0.72
CBX1-201ENST00000225603 ARVCFO00192 962 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms