RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 DNAJB4Q9UDY4 337 aa15.76■□□□□ 0.11
SUPT4H1-201ENST00000225504 A0A0B4J269 797 aa15.75■□□□□ 0.11
SUPT4H1-201ENST00000225504 INPPL1O15357 1258 aa15.75■□□□□ 0.11
SUPT4H1-201ENST00000225504 FAM189A1O60320 539 aa15.75■□□□□ 0.11
SUPT4H1-201ENST00000225504 TNFSF9P41273 254 aa15.75■□□□□ 0.11
SUPT4H1-201ENST00000225504 NOLC1Q14978 699 aaKnown RBP eCLIP15.75■□□□□ 0.11
SUPT4H1-201ENST00000225504 POSTNQ15063 836 aa15.75■□□□□ 0.11
SUPT4H1-201ENST00000225504 KANK3Q6NY19 840 aa15.75■□□□□ 0.11
SUPT4H1-201ENST00000225504 COLGALT1Q8NBJ5 622 aa15.75■□□□□ 0.11
SUPT4H1-201ENST00000225504 ZSWIM2Q8NEG5 633 aa15.75■□□□□ 0.11
SUPT4H1-201ENST00000225504 GDPD5Q8WTR4 605 aa15.75■□□□□ 0.11
SUPT4H1-201ENST00000225504 SCFD1Q8WVM8 642 aa15.75■□□□□ 0.11
SUPT4H1-201ENST00000225504 HVCN1Q96D96 273 aa15.75■□□□□ 0.11
SUPT4H1-201ENST00000225504 TIGD1Q96MW7 591 aa15.75■□□□□ 0.11
SUPT4H1-201ENST00000225504 LMBRD1Q9NUN5 540 aa15.75■□□□□ 0.11
SUPT4H1-201ENST00000225504 STYXL1Q9Y6J8 313 aa15.75■□□□□ 0.11
SUPT4H1-201ENST00000225504 NT5C1B-RDH14C9J2C7 533 aa15.74■□□□□ 0.11
SUPT4H1-201ENST00000225504 PTGESO14684 152 aa15.74■□□□□ 0.11
SUPT4H1-201ENST00000225504 MYL1P05976 194 aa15.74■□□□□ 0.11
SUPT4H1-201ENST00000225504 RNASELQ05823 741 aaKnown RBP15.74■□□□□ 0.11
SUPT4H1-201ENST00000225504 KCNT2Q6UVM3 1135 aa15.74■□□□□ 0.11
SUPT4H1-201ENST00000225504 ALKAL1Q6UXT8 129 aa15.74■□□□□ 0.11
SUPT4H1-201ENST00000225504 NELFCDQ8IXH7 590 aa15.74■□□□□ 0.11
SUPT4H1-201ENST00000225504 HACE1Q8IYU2 909 aa15.74■□□□□ 0.11
SUPT4H1-201ENST00000225504 SYCP3Q8IZU3 236 aa15.74■□□□□ 0.11
SUPT4H1-201ENST00000225504 LRRC43Q8N309 656 aa15.74■□□□□ 0.11
SUPT4H1-201ENST00000225504 KLHL23Q8NBE8 558 aa15.74■□□□□ 0.11
SUPT4H1-201ENST00000225504 KIAA0895Q8NCT3 520 aa15.74■□□□□ 0.11
SUPT4H1-201ENST00000225504 URGCPQ8TCY9 931 aa15.74■□□□□ 0.11
SUPT4H1-201ENST00000225504 RABGGTAQ92696 567 aa15.74■□□□□ 0.11
SUPT4H1-201ENST00000225504 ALG13Q9NP73 1137 aaKnown RBP15.74■□□□□ 0.11
SUPT4H1-201ENST00000225504 EXOC1Q9NV70 894 aa15.74■□□□□ 0.11
SUPT4H1-201ENST00000225504 CACNG4Q9UBN1 327 aa15.74■□□□□ 0.11
SUPT4H1-201ENST00000225504 TRIP11Q15643 1979 aa15.74■□□□□ 0.11
SUPT4H1-201ENST00000225504 ZMYM2Q9UBW7 1377 aa15.73■□□□□ 0.11
SUPT4H1-201ENST00000225504 C5orf67F2Z3F1 127 aa15.73■□□□□ 0.11
SUPT4H1-201ENST00000225504 H3BNC9 293 aa15.73■□□□□ 0.11
SUPT4H1-201ENST00000225504 GRM6O15303 877 aa15.73■□□□□ 0.11
SUPT4H1-201ENST00000225504 DNAJB1P25685 340 aa15.73■□□□□ 0.11
SUPT4H1-201ENST00000225504 ABCD1P33897 745 aa15.73■□□□□ 0.11
SUPT4H1-201ENST00000225504 BCAR1P56945 870 aa15.73■□□□□ 0.11
SUPT4H1-201ENST00000225504 GPM6BQ13491 265 aa15.73■□□□□ 0.11
SUPT4H1-201ENST00000225504 ALCAMQ13740 583 aa15.73■□□□□ 0.11
SUPT4H1-201ENST00000225504 SLC10A6Q3KNW5 377 aa15.73■□□□□ 0.11
SUPT4H1-201ENST00000225504 APBB1IPQ7Z5R6 666 aaPredicted RBP15.73■□□□□ 0.11
SUPT4H1-201ENST00000225504 SAMD11Q96NU1 681 aa15.73■□□□□ 0.11
SUPT4H1-201ENST00000225504 ACAP3Q96P50 834 aa15.73■□□□□ 0.11
SUPT4H1-201ENST00000225504 MSTO1Q9BUK6 570 aa15.73■□□□□ 0.11
SUPT4H1-201ENST00000225504 CCDC94Q9BW85 323 aaPredicted RBP15.73■□□□□ 0.11
SUPT4H1-201ENST00000225504 MRPL9Q9BYD2 267 aaKnown RBP15.73■□□□□ 0.11
SUPT4H1-201ENST00000225504 KANSL3Q9P2N6 904 aa15.73■□□□□ 0.11
SUPT4H1-201ENST00000225504 PCDHA5Q9Y5H7 936 aa15.73■□□□□ 0.11
SUPT4H1-201ENST00000225504 TRANK1O15050 2925 aa15.73■□□□□ 0.11
SUPT4H1-201ENST00000225504 CDH23Q9H251 3354 aa15.73■□□□□ 0.11
SUPT4H1-201ENST00000225504 OGTO15294 1046 aa15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 TGFB1I1O43294 461 aa15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 ZC3H11AO75152 810 aaKnown RBP eCLIP15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 RHOBTB3O94955 611 aa15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 ITGB1P05556 798 aa15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 RB1P06400 928 aa15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 GALTP07902 379 aa15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 SLC11A1P49279 550 aa15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 ACOT2P49753 483 aa15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 PSMD2Q13200 908 aa15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 NAB2Q15742 525 aa15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 GLRA4Q5JXX5 417 aa15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 CRELD2Q6UXH1 353 aaPredicted RBP15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 TMEM173Q86WV6 379 aaPredicted RBP15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 COLGALT2Q8IYK4 626 aa15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 TMEM130Q8N3G9 435 aa15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 SPPL3Q8TCT6 385 aa15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 BCL7CQ8WUZ0 217 aaPredicted RBP15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 ZMAT2Q96NC0 199 aaKnown RBP15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 CBWD1Q9BRT8 395 aa15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 PCIF1Q9H4Z3 704 aa15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 AGO2Q9UKV8 859 aaKnown RBP15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 EXOC7Q9UPT5 735 aa15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 PCDHB12Q9Y5F1 795 aa15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 RALGAPA2Q2PPJ7 1873 aa15.72■□□□□ 0.11
SUPT4H1-201ENST00000225504 SMIM28A0A1B0GU29 152 aa15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 F8W810 466 aa15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 EIF3DO15371 548 aaKnown RBP eCLIP15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 KINO60870 393 aaKnown RBP15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 CXCL8P10145 99 aa15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 LAG3P18627 525 aa15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 IGFBP4P22692 258 aa15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 IGFBP6P24592 240 aaPredicted RBP15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 SPAG1Q07617 926 aa15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 DSC1Q08554 894 aa15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 CAMK1Q14012 370 aa15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 ENOX2Q16206 610 aaKnown RBP15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 XKR4Q5GH76 650 aa15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 SLFN12LQ6IEE8 588 aa15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 STXBP4Q6ZWJ1 553 aa15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 POMGNT1Q8WZA1 660 aa15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 ZNF558Q96NG5 402 aa15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 GBP4Q96PP9 640 aa15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 PAAF1Q9BRP4 392 aa15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 PLVAPQ9BX97 442 aa15.71■□□□□ 0.11
SUPT4H1-201ENST00000225504 TMEM206Q9H813 350 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms