RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 FAM105AQ9NUU6 356 aa15.29■□□□□ 0.04
SEC61B-201ENST00000223641 CITO14578 2027 aa15.29■□□□□ 0.04
SEC61B-201ENST00000223641 RALGAPA2Q2PPJ7 1873 aa15.29■□□□□ 0.04
SEC61B-201ENST00000223641 A0A0U1RQF3 1178 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 GOLGA6L3A6NEY3 463 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 MEFVO15553 781 aaPredicted RBP15.28■□□□□ 0.04
SEC61B-201ENST00000223641 NPTXRO95502 500 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 CLTAP09496 248 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 STAG3L1P0CL83 205 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 TNFSF9P41273 254 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 CLDN10P78369 228 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 FAM189BP81408 668 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 CYP24A1Q07973 514 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 BFSP1Q12934 665 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 KRT31Q15323 416 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 SEZ6Q53EL9 994 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 TWF2Q6IBS0 349 aaKnown RBP15.28■□□□□ 0.04
SEC61B-201ENST00000223641 SARM1Q6SZW1 724 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 BRSK2Q8IWQ3 736 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 TMEM192Q8IY95 271 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 THNSL1Q8IYQ7 743 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 RDH13Q8NBN7 331 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 PLEKHO2Q8TD55 490 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 PARD3BQ8TEW8 1205 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 LINC01599Q8WXQ3 324 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 SEPT8Q92599 483 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 ADAM2Q99965 735 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 PRDM5Q9NQX1 630 aaPredicted RBP15.28■□□□□ 0.04
SEC61B-201ENST00000223641 ARMCX3Q9UH62 379 aaPredicted RBP15.28■□□□□ 0.04
SEC61B-201ENST00000223641 IPPQ9Y573 584 aa15.28■□□□□ 0.04
SEC61B-201ENST00000223641 MICAL3Q7RTP6 2002 aa15.27■□□□□ 0.04
SEC61B-201ENST00000223641 C9IYK1 514 aa15.27■□□□□ 0.04
SEC61B-201ENST00000223641 HARSP12081 509 aaKnown RBP15.27■□□□□ 0.04
SEC61B-201ENST00000223641 CDK11BP21127 795 aaKnown RBP15.27■□□□□ 0.04
SEC61B-201ENST00000223641 RAB27AP51159 221 aa15.27■□□□□ 0.04
SEC61B-201ENST00000223641 PPP2R3AQ06190 1150 aa15.27■□□□□ 0.04
SEC61B-201ENST00000223641 PSMD6Q15008 389 aa15.27■□□□□ 0.04
SEC61B-201ENST00000223641 ENOX2Q16206 610 aaKnown RBP15.27■□□□□ 0.04
SEC61B-201ENST00000223641 TCTN1Q2MV58 587 aa15.27■□□□□ 0.04
SEC61B-201ENST00000223641 SLC10A6Q3KNW5 377 aa15.27■□□□□ 0.04
SEC61B-201ENST00000223641 CCDC40Q4G0X9 1142 aa15.27■□□□□ 0.04
SEC61B-201ENST00000223641 C1orf220Q5T0J3 134 aa15.27■□□□□ 0.04
SEC61B-201ENST00000223641 SLC24A5Q71RS6 500 aa15.27■□□□□ 0.04
SEC61B-201ENST00000223641 TMEM199Q8N511 208 aa15.27■□□□□ 0.04
SEC61B-201ENST00000223641 TMC2Q8TDI7 906 aa15.27■□□□□ 0.04
SEC61B-201ENST00000223641 SLC35C1Q96A29 364 aa15.27■□□□□ 0.04
SEC61B-201ENST00000223641 TUBGCP2Q9BSJ2 902 aa15.27■□□□□ 0.04
SEC61B-201ENST00000223641 TRIM6Q9C030 488 aaPredicted RBP15.27■□□□□ 0.04
SEC61B-201ENST00000223641 GRPEL1Q9HAV7 217 aa15.27■□□□□ 0.04
SEC61B-201ENST00000223641 RBAKQ9NYW8 714 aaPredicted RBP15.27■□□□□ 0.04
SEC61B-201ENST00000223641 MAGEC2Q9UBF1 373 aaPredicted RBP15.27■□□□□ 0.04
SEC61B-201ENST00000223641 PCDHB2Q9Y5E7 798 aa15.27■□□□□ 0.04
SEC61B-201ENST00000223641 TRIP11Q15643 1979 aa15.26■□□□□ 0.03
SEC61B-201ENST00000223641 TTC26A0AVF1 554 aa15.26■□□□□ 0.03
SEC61B-201ENST00000223641 ENPP3O14638 875 aa15.26■□□□□ 0.03
SEC61B-201ENST00000223641 AP5Z1O43299 807 aa15.26■□□□□ 0.03
SEC61B-201ENST00000223641 PFKMP08237 780 aa15.26■□□□□ 0.03
SEC61B-201ENST00000223641 SKIP12755 728 aa15.26■□□□□ 0.03
SEC61B-201ENST00000223641 CSF2RAP15509 400 aa15.26■□□□□ 0.03
SEC61B-201ENST00000223641 ATF7P17544 494 aaPredicted RBP15.26■□□□□ 0.03
SEC61B-201ENST00000223641 WNT7BP56706 349 aa15.26■□□□□ 0.03
SEC61B-201ENST00000223641 FANCCQ00597 558 aa15.26■□□□□ 0.03
SEC61B-201ENST00000223641 MAN2A1Q16706 1144 aa15.26■□□□□ 0.03
SEC61B-201ENST00000223641 XKR4Q5GH76 650 aa15.26■□□□□ 0.03
SEC61B-201ENST00000223641 MIIPQ5JXC2 388 aa15.26■□□□□ 0.03
SEC61B-201ENST00000223641 CNKSR3Q6P9H4 555 aa15.26■□□□□ 0.03
SEC61B-201ENST00000223641 ALKAL1Q6UXT8 129 aa15.26■□□□□ 0.03
SEC61B-201ENST00000223641 ZNF598Q86UK7 904 aaKnown RBP15.26■□□□□ 0.03
SEC61B-201ENST00000223641 CRIPAKQ8N1N5 446 aa15.26■□□□□ 0.03
SEC61B-201ENST00000223641 ACAP3Q96P50 834 aa15.26■□□□□ 0.03
SEC61B-201ENST00000223641 CCDC94Q9BW85 323 aaPredicted RBP15.26■□□□□ 0.03
SEC61B-201ENST00000223641 NXF3Q9H4D5 531 aaKnown RBP15.26■□□□□ 0.03
SEC61B-201ENST00000223641 ASB7Q9H672 318 aa15.26■□□□□ 0.03
SEC61B-201ENST00000223641 PLEKHA5Q9HAU0 1116 aa15.26■□□□□ 0.03
SEC61B-201ENST00000223641 C1orf112Q9NSG2 853 aa15.26■□□□□ 0.03
SEC61B-201ENST00000223641 SNTG2Q9NY99 539 aa15.26■□□□□ 0.03
SEC61B-201ENST00000223641 PDCD11Q14690 1871 aaKnown RBP15.26■□□□□ 0.03
SEC61B-201ENST00000223641 A0A1B0GTH6 734 aa15.25■□□□□ 0.03
SEC61B-201ENST00000223641 EOMESO95936 686 aa15.25■□□□□ 0.03
SEC61B-201ENST00000223641 MTIF2P46199 727 aaKnown RBP15.25■□□□□ 0.03
SEC61B-201ENST00000223641 MRE11P49959 708 aa15.25■□□□□ 0.03
SEC61B-201ENST00000223641 VAMP7P51809 220 aa15.25■□□□□ 0.03
SEC61B-201ENST00000223641 COPB1P53618 953 aaKnown RBP15.25■□□□□ 0.03
SEC61B-201ENST00000223641 DLG4P78352 724 aa15.25■□□□□ 0.03
SEC61B-201ENST00000223641 SURF1Q15526 300 aa15.25■□□□□ 0.03
SEC61B-201ENST00000223641 DEFB128Q7Z7B8 93 aa15.25■□□□□ 0.03
SEC61B-201ENST00000223641 ECHDC2Q86YB7 292 aa15.25■□□□□ 0.03
SEC61B-201ENST00000223641 CD302Q8IX05 232 aa15.25■□□□□ 0.03
SEC61B-201ENST00000223641 C7orf61Q8IZ16 206 aa15.25■□□□□ 0.03
SEC61B-201ENST00000223641 RPUSD2Q8IZ73 545 aaKnown RBP15.25■□□□□ 0.03
SEC61B-201ENST00000223641 ANKRD20A12PQ8NF67 263 aa15.25■□□□□ 0.03
SEC61B-201ENST00000223641 RNF39Q9H2S5 420 aa15.25■□□□□ 0.03
SEC61B-201ENST00000223641 ELAC1Q9H777 363 aaKnown RBP15.25■□□□□ 0.03
SEC61B-201ENST00000223641 RPF1Q9H9Y2 349 aaKnown RBP15.25■□□□□ 0.03
SEC61B-201ENST00000223641 PRKAG2Q9UGJ0 569 aa15.25■□□□□ 0.03
SEC61B-201ENST00000223641 HES2Q9Y543 173 aa15.25■□□□□ 0.03
SEC61B-201ENST00000223641 TTC3P53804 2025 aa15.25■□□□□ 0.03
SEC61B-201ENST00000223641 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.24■□□□□ 0.03
SEC61B-201ENST00000223641 LRRIQ3A6PVS8 624 aaPredicted RBP15.24■□□□□ 0.03
SEC61B-201ENST00000223641 PMM2O15305 246 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms