RNA–Protein interactions for RNA: ENST00000216274.9

RIPK3-201, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK3, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-201ENST00000216274 SUCLA2Q9P2R7 463 aaPredicted RBP13.84□□□□□ -0.19
RIPK3-201ENST00000216274 MAFBQ9Y5Q3 323 aaPredicted RBP13.84□□□□□ -0.19
RIPK3-201ENST00000216274 CENPFP49454 3210 aa13.84□□□□□ -0.19
RIPK3-201ENST00000216274 LCTP09848 1927 aa13.84□□□□□ -0.19
RIPK3-201ENST00000216274 EDNRBP24530 442 aa13.84□□□□□ -0.19
RIPK3-201ENST00000216274 TNFRSF8P28908 595 aa13.84□□□□□ -0.19
RIPK3-201ENST00000216274 MATR3P43243 847 aaKnown RBP eCLIP13.84□□□□□ -0.19
RIPK3-201ENST00000216274 TNNT3P45378 269 aaPredicted RBP13.84□□□□□ -0.19
RIPK3-201ENST00000216274 TNNC1P63316 161 aa13.84□□□□□ -0.19
RIPK3-201ENST00000216274 CNTN2Q02246 1040 aa13.84□□□□□ -0.19
RIPK3-201ENST00000216274 DMTNQ08495 405 aa13.84□□□□□ -0.19
RIPK3-201ENST00000216274 WDR78Q5VTH9 848 aa13.84□□□□□ -0.19
RIPK3-201ENST00000216274 FAM160B1Q5W0V3 765 aa13.84□□□□□ -0.19
RIPK3-201ENST00000216274 CYFIP1Q7L576 1253 aa13.84□□□□□ -0.19
RIPK3-201ENST00000216274 PEX26Q7Z412 305 aa13.84□□□□□ -0.19
RIPK3-201ENST00000216274 GPD1LQ8N335 351 aa13.84□□□□□ -0.19
RIPK3-201ENST00000216274 PARD3BQ8TEW8 1205 aa13.84□□□□□ -0.19
RIPK3-201ENST00000216274 SAAL1Q96ER3 474 aa13.84□□□□□ -0.19
RIPK3-201ENST00000216274 FAM81BQ96LP2 452 aa13.84□□□□□ -0.19
RIPK3-201ENST00000216274 LRRC1Q9BTT6 524 aa13.84□□□□□ -0.19
RIPK3-201ENST00000216274 SLC5A4Q9NY91 659 aa13.84□□□□□ -0.19
RIPK3-201ENST00000216274 ARHGAP28Q9P2N2 729 aa13.84□□□□□ -0.19
RIPK3-201ENST00000216274 COQ4Q9Y3A0 265 aa13.84□□□□□ -0.19
RIPK3-201ENST00000216274 SYNGAP1Q96PV0 1343 aa13.83□□□□□ -0.2
RIPK3-201ENST00000216274 ANKRD62A6NC57 917 aa13.83□□□□□ -0.2
RIPK3-201ENST00000216274 LRRIQ3A6PVS8 624 aaPredicted RBP13.83□□□□□ -0.2
RIPK3-201ENST00000216274 KCNK3O14649 394 aa13.83□□□□□ -0.2
RIPK3-201ENST00000216274 HNRNPDLO14979 420 aaKnown RBP13.83□□□□□ -0.2
RIPK3-201ENST00000216274 LRRN2O75325 713 aa13.83□□□□□ -0.2
RIPK3-201ENST00000216274 HMGCRP04035 888 aa13.83□□□□□ -0.2
RIPK3-201ENST00000216274 RFC5P40937 340 aa13.83□□□□□ -0.2
RIPK3-201ENST00000216274 CYP24A1Q07973 514 aa13.83□□□□□ -0.2
RIPK3-201ENST00000216274 STRN3Q13033 797 aa13.83□□□□□ -0.2
RIPK3-201ENST00000216274 NEDD9Q14511 834 aa13.83□□□□□ -0.2
RIPK3-201ENST00000216274 TERF2Q15554 542 aa13.83□□□□□ -0.2
RIPK3-201ENST00000216274 SEPT14Q6ZU15 432 aa13.83□□□□□ -0.2
RIPK3-201ENST00000216274 NT5C1BQ96P26 610 aa13.83□□□□□ -0.2
RIPK3-201ENST00000216274 RBM12Q9NTZ6 932 aaKnown RBP13.83□□□□□ -0.2
RIPK3-201ENST00000216274 SEPT11Q9NVA2 429 aaKnown RBP13.83□□□□□ -0.2
RIPK3-201ENST00000216274 STIM2Q9P246 746 aa13.83□□□□□ -0.2
RIPK3-201ENST00000216274 PPME1Q9Y570 386 aa13.83□□□□□ -0.2
RIPK3-201ENST00000216274 CCDC85CA6NKD9 419 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 NAMPTP43490 491 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 LIG4P49917 911 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 DNA2P51530 1060 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 GPC3P51654 580 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 SP2Q02086 613 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 SLC39A4Q6P5W5 647 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 ZSWIM2Q8NEG5 633 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 SH3TC2Q8TF17 1288 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 MS4A14Q96JA4 679 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 NIFKQ9BYG3 293 aaKnown RBP13.82□□□□□ -0.2
RIPK3-201ENST00000216274 ST7Q9NRC1 585 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 NRBP2Q9NSY0 501 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 SMARCAL1Q9NZC9 954 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 EHD2Q9NZN4 543 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 AMFRQ9UKV5 643 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 STXBP5LQ9Y2K9 1186 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 ADGRA3Q8IWK6 1321 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 IGKV6D-21A0A0A0MT36 114 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 ZNF233A6NK53 670 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 EXTL3O43909 919 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 SORBS3O60504 671 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 TGFB3P10600 412 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 CAPN2P17655 700 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 CYP2B6P20813 491 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 UBA1P22314 1058 aaKnown RBP13.82□□□□□ -0.2
RIPK3-201ENST00000216274 ADORA2AP29274 412 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 SOX10P56693 466 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 KCTD2Q14681 263 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 HSP90B2PQ58FF3 399 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 DAAM2Q86T65 1068 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 RHOT2Q8IXI1 618 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 FAM71AQ8IYT1 594 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 USP38Q8NB14 1042 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 FBXL13Q8NEE6 735 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 DEPTORQ8TB45 409 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 ACTRT1Q8TDG2 376 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 UBE2Q2Q8WVN8 375 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 CCDC127Q96BQ5 260 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 DHX33Q9H6R0 707 aaKnown RBP13.82□□□□□ -0.2
RIPK3-201ENST00000216274 PDE11AQ9HCR9 933 aa13.82□□□□□ -0.2
RIPK3-201ENST00000216274 PACSIN2Q9UNF0 486 aaPredicted RBP13.82□□□□□ -0.2
RIPK3-201ENST00000216274 DIS3Q9Y2L1 958 aaKnown RBP13.82□□□□□ -0.2
RIPK3-201ENST00000216274 PLXNA1Q9UIW2 1896 aa13.81□□□□□ -0.2
RIPK3-201ENST00000216274 SOWAHBA6NEL2 793 aa13.81□□□□□ -0.2
RIPK3-201ENST00000216274 TMCO5BA8MYB1 307 aa13.81□□□□□ -0.2
RIPK3-201ENST00000216274 POLR3GO15318 223 aaPredicted RBP13.81□□□□□ -0.2
RIPK3-201ENST00000216274 ZC3H11AO75152 810 aaKnown RBP eCLIP13.81□□□□□ -0.2
RIPK3-201ENST00000216274 PIGRP01833 764 aa13.81□□□□□ -0.2
RIPK3-201ENST00000216274 HADHBP55084 474 aaKnown RBP13.81□□□□□ -0.2
RIPK3-201ENST00000216274 TCEAL1Q15170 157 aa13.81□□□□□ -0.2
RIPK3-201ENST00000216274 OLFML2BQ68BL8 750 aa13.81□□□□□ -0.2
RIPK3-201ENST00000216274 SLFN12LQ6IEE8 588 aa13.81□□□□□ -0.2
RIPK3-201ENST00000216274 KCNV1Q6PIU1 500 aa13.81□□□□□ -0.2
RIPK3-201ENST00000216274 ENOSF1Q7L5Y1 443 aa13.81□□□□□ -0.2
RIPK3-201ENST00000216274 IFT20Q8IY31 132 aa13.81□□□□□ -0.2
RIPK3-201ENST00000216274 RPUSD2Q8IZ73 545 aaKnown RBP13.81□□□□□ -0.2
RIPK3-201ENST00000216274 SLC35G2Q8TBE7 412 aa13.81□□□□□ -0.2
RIPK3-201ENST00000216274 AENQ8WTP8 325 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms