RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 DOCK8Q8NF50 2099 aa16.57■□□□□ 0.24
UPK3A-201ENST00000216211 CCDC195A0A1B0GUA6 201 aa16.56■□□□□ 0.24
UPK3A-201ENST00000216211 EDN1P05305 212 aa16.56■□□□□ 0.24
UPK3A-201ENST00000216211 CCT6AP40227 531 aaKnown RBP16.56■□□□□ 0.24
UPK3A-201ENST00000216211 NAMPTP43490 491 aa16.56■□□□□ 0.24
UPK3A-201ENST00000216211 MAPK6Q16659 721 aa16.56■□□□□ 0.24
UPK3A-201ENST00000216211 USP41Q3LFD5 358 aa16.56■□□□□ 0.24
UPK3A-201ENST00000216211 HAUS3Q68CZ6 603 aa16.56■□□□□ 0.24
UPK3A-201ENST00000216211 OTOP3Q7RTS5 596 aa16.56■□□□□ 0.24
UPK3A-201ENST00000216211 PALB2Q86YC2 1186 aa16.56■□□□□ 0.24
UPK3A-201ENST00000216211 CMASQ8NFW8 434 aaPredicted RBP16.56■□□□□ 0.24
UPK3A-201ENST00000216211 DEPTORQ8TB45 409 aa16.56■□□□□ 0.24
UPK3A-201ENST00000216211 HASPINQ8TF76 798 aa16.56■□□□□ 0.24
UPK3A-201ENST00000216211 PAAF1Q9BRP4 392 aa16.56■□□□□ 0.24
UPK3A-201ENST00000216211 CCDC113Q9H0I3 377 aa16.56■□□□□ 0.24
UPK3A-201ENST00000216211 CXCL16Q9H2A7 254 aa16.56■□□□□ 0.24
UPK3A-201ENST00000216211 SH2B1Q9NRF2 756 aaPredicted RBP16.56■□□□□ 0.24
UPK3A-201ENST00000216211 NOL7Q9UMY1 257 aaKnown RBP16.56■□□□□ 0.24
UPK3A-201ENST00000216211 DOCK6Q96HP0 2047 aa16.56■□□□□ 0.24
UPK3A-201ENST00000216211 CASTOR2A6NHX0 329 aa16.55■□□□□ 0.24
UPK3A-201ENST00000216211 PTGESO14684 152 aa16.55■□□□□ 0.24
UPK3A-201ENST00000216211 TADA2AO75478 443 aa16.55■□□□□ 0.24
UPK3A-201ENST00000216211 RFPL2O75678 378 aa16.55■□□□□ 0.24
UPK3A-201ENST00000216211 RPL17P18621 184 aaKnown RBP16.55■□□□□ 0.24
UPK3A-201ENST00000216211 MUTP22033 750 aa16.55■□□□□ 0.24
UPK3A-201ENST00000216211 TRAPPC10P48553 1259 aa16.55■□□□□ 0.24
UPK3A-201ENST00000216211 FXR2P51116 673 aaKnown RBP eCLIP16.55■□□□□ 0.24
UPK3A-201ENST00000216211 TUSC3Q13454 348 aa16.55■□□□□ 0.24
UPK3A-201ENST00000216211 HSP90AA2PQ14568 343 aaPredicted RBP16.55■□□□□ 0.24
UPK3A-201ENST00000216211 EEF1DP3Q658K8 133 aa16.55■□□□□ 0.24
UPK3A-201ENST00000216211 RIN2Q8WYP3 895 aaPredicted RBP16.55■□□□□ 0.24
UPK3A-201ENST00000216211 KIFC3Q9BVG8 833 aa16.55■□□□□ 0.24
UPK3A-201ENST00000216211 BHMT2Q9H2M3 363 aa16.55■□□□□ 0.24
UPK3A-201ENST00000216211 LRWD1Q9UFC0 647 aa16.55■□□□□ 0.24
UPK3A-201ENST00000216211 KIAA1024Q9UPX6 916 aa16.55■□□□□ 0.24
UPK3A-201ENST00000216211 ACKR2O00590 384 aa16.54■□□□□ 0.24
UPK3A-201ENST00000216211 TGM5O43548 720 aa16.54■□□□□ 0.24
UPK3A-201ENST00000216211 N4BP1O75113 896 aaKnown RBP16.54■□□□□ 0.24
UPK3A-201ENST00000216211 RECQL4O94761 1208 aa16.54■□□□□ 0.24
UPK3A-201ENST00000216211 TOB1P50616 345 aaPredicted RBP16.54■□□□□ 0.24
UPK3A-201ENST00000216211 RTP2Q5QGT7 225 aa16.54■□□□□ 0.24
UPK3A-201ENST00000216211 ELMSAN1Q6PJG2 1045 aa16.54■□□□□ 0.24
UPK3A-201ENST00000216211 PRSS55Q6UWB4 352 aaPredicted RBP16.54■□□□□ 0.24
UPK3A-201ENST00000216211 SMG7Q92540 1137 aaKnown RBP16.54■□□□□ 0.24
UPK3A-201ENST00000216211 IFT74Q96LB3 600 aa16.54■□□□□ 0.24
UPK3A-201ENST00000216211 ADPGKQ9BRR6 497 aa16.54■□□□□ 0.24
UPK3A-201ENST00000216211 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.54■□□□□ 0.24
UPK3A-201ENST00000216211 DDX19AQ9NUU7 478 aaKnown RBP16.54■□□□□ 0.24
UPK3A-201ENST00000216211 FAM86C1Q9NVL1 165 aa16.54■□□□□ 0.24
UPK3A-201ENST00000216211 FNIP2Q9P278 1114 aa16.54■□□□□ 0.24
UPK3A-201ENST00000216211 DPP7Q9UHL4 492 aa16.54■□□□□ 0.24
UPK3A-201ENST00000216211 PCDHB6Q9Y5E3 794 aa16.54■□□□□ 0.24
UPK3A-201ENST00000216211 DMDP11532 3685 aa16.54■□□□□ 0.24
UPK3A-201ENST00000216211 MYO15AQ9UKN7 3530 aa16.54■□□□□ 0.24
UPK3A-201ENST00000216211 CITO14578 2027 aa16.53■□□□□ 0.24
UPK3A-201ENST00000216211 CLUHO75153 1309 aa16.53■□□□□ 0.24
UPK3A-201ENST00000216211 SF3B1O75533 1304 aaKnown RBP eCLIP16.53■□□□□ 0.24
UPK3A-201ENST00000216211 KIF4AO95239 1232 aa16.53■□□□□ 0.24
UPK3A-201ENST00000216211 THP07101 528 aa16.53■□□□□ 0.24
UPK3A-201ENST00000216211 U2AF2P26368 475 aaKnown RBP eCLIP16.53■□□□□ 0.24
UPK3A-201ENST00000216211 PTGDRQ13258 359 aa16.53■□□□□ 0.24
UPK3A-201ENST00000216211 PPP2R5AQ15172 486 aa16.53■□□□□ 0.24
UPK3A-201ENST00000216211 NAB2Q15742 525 aa16.53■□□□□ 0.24
UPK3A-201ENST00000216211 SNX29Q8TEQ0 813 aa16.53■□□□□ 0.24
UPK3A-201ENST00000216211 HDAC7Q8WUI4 952 aa16.53■□□□□ 0.24
UPK3A-201ENST00000216211 ZNF707Q96C28 371 aaPredicted RBP16.53■□□□□ 0.24
UPK3A-201ENST00000216211 KCNK12Q9HB15 430 aa16.53■□□□□ 0.24
UPK3A-201ENST00000216211 WDR6Q9NNW5 1121 aaKnown RBP16.53■□□□□ 0.24
UPK3A-201ENST00000216211 GDAQ9Y2T3 454 aa16.53■□□□□ 0.24
UPK3A-201ENST00000216211 E9PMD0 336 aa16.52■□□□□ 0.24
UPK3A-201ENST00000216211 GBP2P32456 591 aaPredicted RBP16.52■□□□□ 0.24
UPK3A-201ENST00000216211 TDGQ13569 410 aa16.52■□□□□ 0.24
UPK3A-201ENST00000216211 PDIA5Q14554 519 aa16.52■□□□□ 0.24
UPK3A-201ENST00000216211 NT5DC1Q5TFE4 455 aa16.52■□□□□ 0.24
UPK3A-201ENST00000216211 LILRA6Q6PI73 481 aa16.52■□□□□ 0.24
UPK3A-201ENST00000216211 CYP26C1Q6V0L0 522 aa16.52■□□□□ 0.24
UPK3A-201ENST00000216211 CEP57Q86XR8 500 aa16.52■□□□□ 0.24
UPK3A-201ENST00000216211 GPR65Q8IYL9 337 aa16.52■□□□□ 0.24
UPK3A-201ENST00000216211 TMEM105Q8N8V8 129 aa16.52■□□□□ 0.24
UPK3A-201ENST00000216211 IGSF22Q8N9C0 903 aa16.52■□□□□ 0.24
UPK3A-201ENST00000216211 KIFAP3Q92845 792 aa16.52■□□□□ 0.24
UPK3A-201ENST00000216211 NT5C3AQ9H0P0 336 aa16.52■□□□□ 0.24
UPK3A-201ENST00000216211 MFSD1Q9H3U5 465 aa16.52■□□□□ 0.24
UPK3A-201ENST00000216211 PLEKHA4Q9H4M7 779 aa16.52■□□□□ 0.24
UPK3A-201ENST00000216211 PIDD1Q9HB75 910 aa16.52■□□□□ 0.24
UPK3A-201ENST00000216211 PDCD11Q14690 1871 aaKnown RBP16.52■□□□□ 0.23
UPK3A-201ENST00000216211 PP2D1A8MPX8 630 aa16.51■□□□□ 0.23
UPK3A-201ENST00000216211 EFNA5P52803 228 aa16.51■□□□□ 0.23
UPK3A-201ENST00000216211 CREMQ03060 361 aa16.51■□□□□ 0.23
UPK3A-201ENST00000216211 DCAF4L1Q3SXM0 396 aa16.51■□□□□ 0.23
UPK3A-201ENST00000216211 ATF7IP2Q5U623 682 aa16.51■□□□□ 0.23
UPK3A-201ENST00000216211 FAM171A1Q5VUB5 890 aa16.51■□□□□ 0.23
UPK3A-201ENST00000216211 STAMQ92783 540 aa16.51■□□□□ 0.23
UPK3A-201ENST00000216211 MYADMQ96S97 322 aa16.51■□□□□ 0.23
UPK3A-201ENST00000216211 TTPALQ9BTX7 342 aa16.51■□□□□ 0.23
UPK3A-201ENST00000216211 RHOBTB2Q9BYZ6 727 aa16.51■□□□□ 0.23
UPK3A-201ENST00000216211 RAB34Q9BZG1 259 aa16.51■□□□□ 0.23
UPK3A-201ENST00000216211 ZDHHC7Q9NXF8 308 aa16.51■□□□□ 0.23
UPK3A-201ENST00000216211 DUSP12Q9UNI6 340 aa16.51■□□□□ 0.23
UPK3A-201ENST00000216211 STK24Q9Y6E0 443 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms