RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 TRIM50Q86XT4 487 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 FNBP1Q96RU3 617 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 TARS2Q9BW92 718 aaKnown RBP8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 DDX47Q9H0S4 455 aaKnown RBP8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 NFU1Q9UMS0 254 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 AGTPBP1Q9UPW5 1226 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 PTPRJQ12913 1337 aa8.6□□□□□ -1.03
HMGXB4-201ENST00000216106 HARSP12081 509 aaKnown RBP8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 KRT5P13647 590 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 GTF2H1P32780 548 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 NF2P35240 595 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 DCAF12L1Q5VU92 463 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 IFT20Q8IY31 132 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 FAM71BQ8TC56 605 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 OPTNQ96CV9 577 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 NIFKQ9BYG3 293 aaKnown RBP8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 GDF3Q9NR23 364 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 ADAM21Q9UKJ8 722 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 TMEM110-MUSTN1A8MSY1 372 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 KRIT1O00522 736 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 RTN2O75298 545 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 SYF2O95926 243 aaKnown RBP8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 ITGA4P13612 1032 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 TNFRSF8P28908 595 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 GGCXP38435 758 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 CAPSQ13938 189 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 HSDL1Q3SXM5 330 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 SEZ6Q53EL9 994 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 METTL7BQ6UX53 244 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 RHOT2Q8IXI1 618 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 SCFD2Q8WU76 684 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 PSPC1Q8WXF1 523 aaKnown RBP8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 MED4Q9NPJ6 270 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 ERICH4A6NGS2 130 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 CXCL11O14625 94 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 DDX3YO15523 660 aaKnown RBP8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 AARSP49588 968 aaKnown RBP eCLIP8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 GPC5P78333 572 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 BIRC3Q13489 604 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 NAA35Q5VZE5 725 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 FAM160B1Q5W0V3 765 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 CRELD2Q6UXH1 353 aaPredicted RBP8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 RASGEF1CQ8N431 466 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 CASKIN2Q8WXE0 1202 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 SEPT1Q8WYJ6 367 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 GLG1Q92896 1179 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 FGD4Q96M96 766 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 ZMYND15Q9H091 742 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 C1orf112Q9NSG2 853 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 RBAKQ9NYW8 714 aaPredicted RBP8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 RBPJLQ9UBG7 517 aa8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 ZHX1Q9UKY1 873 aaPredicted RBP8.59□□□□□ -1.03
HMGXB4-201ENST00000216106 GOLGA6BA6NDN3 693 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 RNF40O75150 1001 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 CLSTN1O94985 981 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 FGGP02679 453 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 ABCD1P33897 745 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 PIK3CAP42336 1068 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 ZNF211Q13398 564 aaPredicted RBP8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 PSMD6Q15008 389 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 TARBP2Q15633 366 aaKnown RBP8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 TDRD10Q5VZ19 366 aaKnown RBP8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 SPOPLQ6IQ16 392 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 EMBQ6PCB8 327 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 C15orf39Q6ZRI6 1047 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 ADAT2Q7Z6V5 191 aaKnown RBP8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 FBXO16Q8IX29 292 aaPredicted RBP8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 TSEN2Q8NCE0 465 aaKnown RBP8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 MSTO1Q9BUK6 570 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 AZI2Q9H6S1 392 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 NRBP2Q9NSY0 501 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 TTLL13PA6NNM8 815 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 AGPSO00116 658 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 SART1O43290 800 aaKnown RBP8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 FAM153BP0C7A2 387 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 TGFB3P10600 412 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 CDR2Q01850 454 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 FAM153CQ494X1 144 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 CALR3Q96L12 384 aaKnown RBP8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 KIAA1586Q9HCI6 787 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 FAM153AQ9UHL3 310 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 KCNG1Q9UIX4 513 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 KCNH4Q9UQ05 1017 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 ALG6Q9Y672 507 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 STYXL1Q9Y6J8 313 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 NOP56O00567 594 aaKnown RBP8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 SOCS7O14512 581 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 SLC25A27O95847 323 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 HLA-DRAP01903 254 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 GZMAP12544 262 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 RFC5P40937 340 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 GUCY2FP51841 1108 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 GCNT1Q02742 428 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 PPIL2Q13356 520 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 MOGSQ13724 837 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 MESDQ14696 234 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 TMEM63BQ5T3F8 832 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 AFAP1L1Q8TED9 768 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 DDX1Q92499 740 aaKnown RBP8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 ALG3Q92685 438 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms