RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 CHRNB2P17787 502 aa16.15■□□□□ 0.18
EFNB1-201ENST00000204961 QARSP47897 775 aaKnown RBP16.15■□□□□ 0.18
EFNB1-201ENST00000204961 PDE6CP51160 858 aa16.15■□□□□ 0.18
EFNB1-201ENST00000204961 MRPS9P82933 396 aaKnown RBP16.15■□□□□ 0.18
EFNB1-201ENST00000204961 MTMR3Q13615 1198 aa16.15■□□□□ 0.18
EFNB1-201ENST00000204961 ZDHHC24Q6UX98 284 aa16.15■□□□□ 0.18
EFNB1-201ENST00000204961 GMCL1Q96IK5 515 aa16.15■□□□□ 0.18
EFNB1-201ENST00000204961 C12orf65Q9H3J6 166 aaKnown RBP16.15■□□□□ 0.18
EFNB1-201ENST00000204961 LRRIQ4A6NIV6 560 aa16.15■□□□□ 0.18
EFNB1-201ENST00000204961 THAP12O43422 761 aa16.15■□□□□ 0.18
EFNB1-201ENST00000204961 CSDE1O75534 798 aaKnown RBP16.15■□□□□ 0.18
EFNB1-201ENST00000204961 VCAM1P19320 739 aa16.15■□□□□ 0.18
EFNB1-201ENST00000204961 SCP2P22307 547 aa16.15■□□□□ 0.18
EFNB1-201ENST00000204961 PRCCQ92733 491 aaPredicted RBP16.15■□□□□ 0.18
EFNB1-201ENST00000204961 ZBTB10Q96DT7 871 aa16.15■□□□□ 0.18
EFNB1-201ENST00000204961 KLF6Q99612 283 aaPredicted RBP16.15■□□□□ 0.18
EFNB1-201ENST00000204961 PLIN4Q96Q06 1357 aa16.15■□□□□ 0.18
EFNB1-201ENST00000204961 MAP3K6O95382 1288 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 CYP11B1P15538 503 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 MTMR2Q13614 643 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 BAATQ14032 418 aaPredicted RBP16.14■□□□□ 0.17
EFNB1-201ENST00000204961 ZBTB41Q5SVQ8 909 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 TMEM270Q6UE05 265 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 ARHGEF2Q92974 986 aaKnown RBP16.14■□□□□ 0.17
EFNB1-201ENST00000204961 CNKSR1Q969H4 720 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 CHMP6Q96FZ7 201 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 TUFT1Q9NNX1 390 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 UPP2O95045 317 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 TCF4P15884 667 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 ADSSP30520 456 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 TMEM132AQ24JP5 1023 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 TKFCQ3LXA3 575 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 DUPD1Q68J44 220 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 SAMD7Q7Z3H4 446 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 ZKSCAN4Q969J2 545 aaPredicted RBP16.14■□□□□ 0.17
EFNB1-201ENST00000204961 MBOAT7Q96N66 472 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 PABPC3Q9H361 631 aaKnown RBP16.14■□□□□ 0.17
EFNB1-201ENST00000204961 VCPKMTQ9H867 229 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 MTUS1Q9ULD2 1270 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 CEP83Q9Y592 693 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 MARK3P27448 753 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 CIITAP33076 1130 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 FMO1Q01740 532 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 TMED2Q15363 201 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 SV2AQ7L0J3 742 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 IDI2Q9BXS1 227 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 CDC42EP4Q9H3Q1 356 aaKnown RBP16.14■□□□□ 0.17
EFNB1-201ENST00000204961 KIF9Q9HAQ2 790 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 SAMD15Q9P1V8 674 aa16.14■□□□□ 0.17
EFNB1-201ENST00000204961 RPTORQ8N122 1335 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 GOLGA8RI6L899 631 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 P4HBP07237 508 aaKnown RBP16.13■□□□□ 0.17
EFNB1-201ENST00000204961 COILP38432 576 aaPredicted RBP16.13■□□□□ 0.17
EFNB1-201ENST00000204961 NPTX2P47972 431 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 C1orf220Q5T0J3 134 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 INTS8Q75QN2 995 aaKnown RBP16.13■□□□□ 0.17
EFNB1-201ENST00000204961 SLFN11Q7Z7L1 901 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 SLC13A5Q86YT5 568 aaPredicted RBP16.13■□□□□ 0.17
EFNB1-201ENST00000204961 TEX2Q8IWB9 1127 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 SPOCK2Q92563 424 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 NT5C1BQ96P26 610 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 FNBP1Q96RU3 617 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 CDK5RAP2Q96SN8 1893 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 SBF2Q86WG5 1849 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 A8MUI8 341 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 ECEL1O95672 775 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 CCNE2O96020 404 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 RALAP11233 206 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 TNFRSF8P28908 595 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 SCTRP47872 440 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 NRLP54845 237 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 WNT7BP56706 349 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 MREGQ8N565 214 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 CCDC197Q8NCU1 140 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 OLIG1Q8TAK6 271 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 LMO3Q8TAP4 145 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 KCNV2Q8TDN2 545 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 N4BP2L2Q92802 583 aaPredicted RBP16.13■□□□□ 0.17
EFNB1-201ENST00000204961 CALR3Q96L12 384 aaKnown RBP16.13■□□□□ 0.17
EFNB1-201ENST00000204961 GRHL1Q9NZI5 618 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 SUFUQ9UMX1 484 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 TMX2Q9Y320 296 aa16.13■□□□□ 0.17
EFNB1-201ENST00000204961 FRMPD4Q14CM0 1322 aa16.12■□□□□ 0.17
EFNB1-201ENST00000204961 PHF2O75151 1096 aa16.12■□□□□ 0.17
EFNB1-201ENST00000204961 ITGA8P53708 1063 aa16.12■□□□□ 0.17
EFNB1-201ENST00000204961 WDR78Q5VTH9 848 aa16.12■□□□□ 0.17
EFNB1-201ENST00000204961 HOOK3Q86VS8 718 aa16.12■□□□□ 0.17
EFNB1-201ENST00000204961 C4orf33Q8N1A6 199 aa16.12■□□□□ 0.17
EFNB1-201ENST00000204961 ATG4CQ96DT6 458 aa16.12■□□□□ 0.17
EFNB1-201ENST00000204961 CARD9Q9H257 536 aa16.12■□□□□ 0.17
EFNB1-201ENST00000204961 PNMA3Q9UL41 463 aa16.12■□□□□ 0.17
EFNB1-201ENST00000204961 TMEM120BA0PK00 339 aa16.12■□□□□ 0.17
EFNB1-201ENST00000204961 SPDYE2BA6NHP3 402 aa16.12■□□□□ 0.17
EFNB1-201ENST00000204961 SPDYE6P0CI01 402 aa16.12■□□□□ 0.17
EFNB1-201ENST00000204961 SMTNL2Q2TAL5 461 aa16.12■□□□□ 0.17
EFNB1-201ENST00000204961 CYP4X1Q8N118 509 aa16.12■□□□□ 0.17
EFNB1-201ENST00000204961 CCDC33Q8N5R6 958 aa16.12■□□□□ 0.17
EFNB1-201ENST00000204961 GMCL1P1Q8NEA9 526 aa16.12■□□□□ 0.17
EFNB1-201ENST00000204961 EPB41L4BQ9H329 900 aa16.12■□□□□ 0.17
EFNB1-201ENST00000204961 VIL1P09327 827 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms