RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 TCEAL1Q15170 157 aa15.46■□□□□ 0.06
RTFDC1-201ENST00000023939 IQSEC1Q6DN90 963 aa15.46■□□□□ 0.06
RTFDC1-201ENST00000023939 RASAL3Q86YV0 1011 aa15.46■□□□□ 0.06
RTFDC1-201ENST00000023939 IFNLR1Q8IU57 520 aaPredicted RBP15.46■□□□□ 0.06
RTFDC1-201ENST00000023939 LINC01465Q8N7H1 131 aa15.46■□□□□ 0.06
RTFDC1-201ENST00000023939 RNF149Q8NC42 400 aa15.46■□□□□ 0.06
RTFDC1-201ENST00000023939 ZBTB45Q96K62 511 aaPredicted RBP15.46■□□□□ 0.06
RTFDC1-201ENST00000023939 CGRRF1Q99675 332 aa15.46■□□□□ 0.06
RTFDC1-201ENST00000023939 ACO2Q99798 780 aaKnown RBP15.46■□□□□ 0.06
RTFDC1-201ENST00000023939 RNPEPQ9H4A4 650 aa15.46■□□□□ 0.06
RTFDC1-201ENST00000023939 ARGLU1Q9NWB6 273 aaPredicted RBP15.46■□□□□ 0.06
RTFDC1-201ENST00000023939 RBAKQ9NYW8 714 aaPredicted RBP15.46■□□□□ 0.06
RTFDC1-201ENST00000023939 RNF14Q9UBS8 474 aa15.46■□□□□ 0.06
RTFDC1-201ENST00000023939 CNTNAP2Q9UHC6 1331 aa15.46■□□□□ 0.06
RTFDC1-201ENST00000023939 GRID2IPA4D2P6 1211 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 ACKR2O00590 384 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 CLDN3O15551 220 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 SRGAP2O75044 1071 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 TFRCP02786 760 aaKnown RBP15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 PRKCBP05771 671 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 ZSCAN20P17040 1043 aaPredicted RBP15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 PROZP22891 400 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 ADCYAP1R1P41586 468 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 ACOT2P49753 483 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 NAP1L1P55209 391 aaKnown RBP15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 PTENP60484 403 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 MCL1Q07820 350 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 MEI1Q5TIA1 1274 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 CHADLQ6NUI6 762 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 EFCAB12Q6NXP0 572 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 TSHZ1Q6ZSZ6 1077 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 CREG2Q8IUH2 290 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 BRSK2Q8IWQ3 736 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 PPM1KQ8N3J5 372 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 LRRC71Q8N4P6 559 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 LRRC57Q8N9N7 239 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 AFG1LQ8WV93 481 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 KAT5Q92993 513 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 CALR3Q96L12 384 aaKnown RBP15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 OSBPL9Q96SU4 736 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 C16orf70Q9BSU1 422 aa15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 NOCTQ9UK39 431 aaKnown RBP15.45■□□□□ 0.06
RTFDC1-201ENST00000023939 INSRRP14616 1297 aa15.44■□□□□ 0.06
RTFDC1-201ENST00000023939 GALCP54803 685 aa15.44■□□□□ 0.06
RTFDC1-201ENST00000023939 ACVR2BQ13705 512 aa15.44■□□□□ 0.06
RTFDC1-201ENST00000023939 MORN1Q5T089 497 aa15.44■□□□□ 0.06
RTFDC1-201ENST00000023939 SLFN11Q7Z7L1 901 aa15.44■□□□□ 0.06
RTFDC1-201ENST00000023939 EPS8L1Q8TE68 723 aa15.44■□□□□ 0.06
RTFDC1-201ENST00000023939 LMBR1Q8WVP7 490 aa15.44■□□□□ 0.06
RTFDC1-201ENST00000023939 DHX38Q92620 1227 aaKnown RBP15.44■□□□□ 0.06
RTFDC1-201ENST00000023939 MMS19Q96T76 1030 aa15.44■□□□□ 0.06
RTFDC1-201ENST00000023939 ISCUQ9H1K1 167 aa15.44■□□□□ 0.06
RTFDC1-201ENST00000023939 PDE11AQ9HCR9 933 aa15.44■□□□□ 0.06
RTFDC1-201ENST00000023939 PTPRHQ9HD43 1115 aa15.44■□□□□ 0.06
RTFDC1-201ENST00000023939 NMRK2Q9NPI5 230 aa15.44■□□□□ 0.06
RTFDC1-201ENST00000023939 ANKFY1Q9P2R3 1169 aa15.44■□□□□ 0.06
RTFDC1-201ENST00000023939 RAB21Q9UL25 225 aa15.44■□□□□ 0.06
RTFDC1-201ENST00000023939 TRPM7Q96QT4 1865 aa15.44■□□□□ 0.06
RTFDC1-201ENST00000023939 ANKRD62A6NC57 917 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 CES2O00748 559 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 OGTO15294 1046 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 HOXC6P09630 235 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 SRGAP2CP0DJJ0 459 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 GZMAP12544 262 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 SMPD1P17405 629 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 WNT7BP56706 349 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 SURF1Q15526 300 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 FAM187BQ17R55 369 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 GJC2Q5T442 439 aaPredicted RBP15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 TPCN2Q8NHX9 752 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 NPLOC4Q8TAT6 608 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 TRAPPC12Q8WVT3 735 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 RFFLQ8WZ73 363 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 PARD6BQ9BYG5 372 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 PDE2AO00408 941 aaPredicted RBP15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 HLA-DRAP01903 254 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 TNNI1P19237 187 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 CLCN6P51797 869 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 HADHBP55084 474 aaKnown RBP15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 MAP2K5Q13163 448 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 BRD3Q15059 726 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 WDR44Q5JSH3 913 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 ZBTB41Q5SVQ8 909 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 TDRD10Q5VZ19 366 aaKnown RBP15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 RHPN2Q8IUC4 686 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 COG1Q8WTW3 980 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 ANKZF1Q9H8Y5 726 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 C1orf112Q9NSG2 853 aa15.43■□□□□ 0.06
RTFDC1-201ENST00000023939 PTPRJQ12913 1337 aa15.42■□□□□ 0.06
RTFDC1-201ENST00000023939 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.42■□□□□ 0.06
RTFDC1-201ENST00000023939 TTLL13PA6NNM8 815 aa15.42■□□□□ 0.06
RTFDC1-201ENST00000023939 IGF2BP3O00425 579 aaKnown RBP eCLIP15.42■□□□□ 0.06
RTFDC1-201ENST00000023939 ZNF185O15231 689 aa15.42■□□□□ 0.06
RTFDC1-201ENST00000023939 VNN1O95497 513 aa15.42■□□□□ 0.06
RTFDC1-201ENST00000023939 CHRNB2P17787 502 aa15.42■□□□□ 0.06
RTFDC1-201ENST00000023939 MATR3P43243 847 aaKnown RBP eCLIP15.42■□□□□ 0.06
RTFDC1-201ENST00000023939 INHBEP58166 350 aa15.42■□□□□ 0.06
RTFDC1-201ENST00000023939 POU5F1Q01860 360 aaKnown RBP15.42■□□□□ 0.06
RTFDC1-201ENST00000023939 MBTD1Q05BQ5 628 aa15.42■□□□□ 0.06
RTFDC1-201ENST00000023939 NFRKBQ6P4R8 1299 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms