RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 PDGFBP01127 241 aaPredicted RBP17.54■□□□□ 0.4
ERCC1-201ENST00000013807 CREMQ03060 361 aa17.54■□□□□ 0.4
ERCC1-201ENST00000013807 PPP2R5AQ15172 486 aa17.54■□□□□ 0.4
ERCC1-201ENST00000013807 NAB2Q15742 525 aa17.54■□□□□ 0.4
ERCC1-201ENST00000013807 MAPK6Q16659 721 aa17.54■□□□□ 0.4
ERCC1-201ENST00000013807 MAEAQ7L5Y9 396 aa17.54■□□□□ 0.4
ERCC1-201ENST00000013807 IGSF22Q8N9C0 903 aa17.54■□□□□ 0.4
ERCC1-201ENST00000013807 BSNDQ8WZ55 320 aa17.54■□□□□ 0.4
ERCC1-201ENST00000013807 APOL6Q9BWW8 343 aa17.54■□□□□ 0.4
ERCC1-201ENST00000013807 IGSF9Q9P2J2 1179 aa17.54■□□□□ 0.4
ERCC1-201ENST00000013807 ARHGEF35A5YM69 484 aa17.53■□□□□ 0.4
ERCC1-201ENST00000013807 PTGESO14684 152 aa17.53■□□□□ 0.4
ERCC1-201ENST00000013807 ASGR2P07307 311 aa17.53■□□□□ 0.4
ERCC1-201ENST00000013807 EFNA5P52803 228 aa17.53■□□□□ 0.4
ERCC1-201ENST00000013807 PRPF4BQ13523 1007 aaKnown RBP17.53■□□□□ 0.4
ERCC1-201ENST00000013807 TDGQ13569 410 aa17.53■□□□□ 0.4
ERCC1-201ENST00000013807 HSP90AA2PQ14568 343 aaPredicted RBP17.53■□□□□ 0.4
ERCC1-201ENST00000013807 ECM1Q16610 540 aa17.53■□□□□ 0.4
ERCC1-201ENST00000013807 ZDHHC7Q9NXF8 308 aa17.53■□□□□ 0.4
ERCC1-201ENST00000013807 KLK14Q9P0G3 267 aa17.53■□□□□ 0.4
ERCC1-201ENST00000013807 PARP2Q9UGN5 583 aa17.53■□□□□ 0.4
ERCC1-201ENST00000013807 NOTCH4Q99466 2003 aa17.52■□□□□ 0.4
ERCC1-201ENST00000013807 LAD1O00515 517 aa17.52■□□□□ 0.4
ERCC1-201ENST00000013807 N4BP1O75113 896 aaKnown RBP17.52■□□□□ 0.4
ERCC1-201ENST00000013807 TADA2AO75478 443 aa17.52■□□□□ 0.4
ERCC1-201ENST00000013807 THP07101 528 aa17.52■□□□□ 0.4
ERCC1-201ENST00000013807 TOB1P50616 345 aaPredicted RBP17.52■□□□□ 0.4
ERCC1-201ENST00000013807 CLCN5P51795 746 aa17.52■□□□□ 0.4
ERCC1-201ENST00000013807 KIFAP3Q92845 792 aa17.52■□□□□ 0.4
ERCC1-201ENST00000013807 NXPE3Q969Y0 559 aa17.52■□□□□ 0.4
ERCC1-201ENST00000013807 ZNF707Q96C28 371 aaPredicted RBP17.52■□□□□ 0.4
ERCC1-201ENST00000013807 ADPGKQ9BRR6 497 aa17.52■□□□□ 0.4
ERCC1-201ENST00000013807 NT5C3AQ9H0P0 336 aa17.52■□□□□ 0.4
ERCC1-201ENST00000013807 SMOC2Q9H3U7 446 aa17.52■□□□□ 0.4
ERCC1-201ENST00000013807 KCNK12Q9HB15 430 aa17.52■□□□□ 0.4
ERCC1-201ENST00000013807 EPS15L1Q9UBC2 864 aa17.52■□□□□ 0.4
ERCC1-201ENST00000013807 LRWD1Q9UFC0 647 aa17.52■□□□□ 0.4
ERCC1-201ENST00000013807 PDCD11Q14690 1871 aaKnown RBP17.52■□□□□ 0.39
ERCC1-201ENST00000013807 SF3B1O75533 1304 aaKnown RBP eCLIP17.51■□□□□ 0.39
ERCC1-201ENST00000013807 FAM186AA6NE01 2351 aa17.51■□□□□ 0.39
ERCC1-201ENST00000013807 TMEM189-UBE2V1I3L0A0 370 aa17.51■□□□□ 0.39
ERCC1-201ENST00000013807 TGM5O43548 720 aa17.51■□□□□ 0.39
ERCC1-201ENST00000013807 GALR2O43603 387 aaPredicted RBP17.51■□□□□ 0.39
ERCC1-201ENST00000013807 EDN1P05305 212 aa17.51■□□□□ 0.39
ERCC1-201ENST00000013807 PRKCBP05771 671 aa17.51■□□□□ 0.39
ERCC1-201ENST00000013807 PTPRZ1P23471 2315 aaPredicted RBP17.51■□□□□ 0.39
ERCC1-201ENST00000013807 PRPHP41219 470 aa17.51■□□□□ 0.39
ERCC1-201ENST00000013807 PIK3R5Q8WYR1 880 aa17.51■□□□□ 0.39
ERCC1-201ENST00000013807 STAMQ92783 540 aa17.51■□□□□ 0.39
ERCC1-201ENST00000013807 PHOX2BQ99453 314 aa17.51■□□□□ 0.39
ERCC1-201ENST00000013807 PAAF1Q9BRP4 392 aa17.51■□□□□ 0.39
ERCC1-201ENST00000013807 PRKD2Q9BZL6 878 aa17.51■□□□□ 0.39
ERCC1-201ENST00000013807 BHMT2Q9H2M3 363 aa17.51■□□□□ 0.39
ERCC1-201ENST00000013807 SNTG2Q9NY99 539 aa17.51■□□□□ 0.39
ERCC1-201ENST00000013807 NOL7Q9UMY1 257 aaKnown RBP17.51■□□□□ 0.39
ERCC1-201ENST00000013807 DUSP12Q9UNI6 340 aa17.51■□□□□ 0.39
ERCC1-201ENST00000013807 MYO15AQ9UKN7 3530 aa17.5■□□□□ 0.39
ERCC1-201ENST00000013807 VPS13AQ96RL7 3174 aa17.5■□□□□ 0.39
ERCC1-201ENST00000013807 SPDYE4A6NLX3 237 aa17.5■□□□□ 0.39
ERCC1-201ENST00000013807 RFPL2O75678 378 aa17.5■□□□□ 0.39
ERCC1-201ENST00000013807 RECQL4O94761 1208 aa17.5■□□□□ 0.39
ERCC1-201ENST00000013807 CCT6AP40227 531 aaKnown RBP17.5■□□□□ 0.39
ERCC1-201ENST00000013807 ELAVL2Q12926 359 aaKnown RBP17.5■□□□□ 0.39
ERCC1-201ENST00000013807 PTGDRQ13258 359 aa17.5■□□□□ 0.39
ERCC1-201ENST00000013807 DCAF4L1Q3SXM0 396 aa17.5■□□□□ 0.39
ERCC1-201ENST00000013807 C8orf34Q49A92 452 aa17.5■□□□□ 0.39
ERCC1-201ENST00000013807 ASTLQ6HA08 431 aaPredicted RBP17.5■□□□□ 0.39
ERCC1-201ENST00000013807 KCTD17Q8N5Z5 321 aa17.5■□□□□ 0.39
ERCC1-201ENST00000013807 FAM184AQ8NB25 1140 aa17.5■□□□□ 0.39
ERCC1-201ENST00000013807 DEPTORQ8TB45 409 aa17.5■□□□□ 0.39
ERCC1-201ENST00000013807 LNX1Q8TBB1 728 aaPredicted RBP17.5■□□□□ 0.39
ERCC1-201ENST00000013807 RIN2Q8WYP3 895 aaPredicted RBP17.5■□□□□ 0.39
ERCC1-201ENST00000013807 B3GALT6Q96L58 329 aa17.5■□□□□ 0.39
ERCC1-201ENST00000013807 IFT74Q96LB3 600 aa17.5■□□□□ 0.39
ERCC1-201ENST00000013807 CLSTN3Q9BQT9 956 aa17.5■□□□□ 0.39
ERCC1-201ENST00000013807 TTPALQ9BTX7 342 aa17.5■□□□□ 0.39
ERCC1-201ENST00000013807 RAB34Q9BZG1 259 aa17.5■□□□□ 0.39
ERCC1-201ENST00000013807 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.5■□□□□ 0.39
ERCC1-201ENST00000013807 KIAA1024Q9UPX6 916 aa17.5■□□□□ 0.39
ERCC1-201ENST00000013807 CLUHO75153 1309 aa17.49■□□□□ 0.39
ERCC1-201ENST00000013807 PROB1E7EW31 1015 aa17.49■□□□□ 0.39
ERCC1-201ENST00000013807 ZMYND10O75800 440 aa17.49■□□□□ 0.39
ERCC1-201ENST00000013807 KIF4AO95239 1232 aa17.49■□□□□ 0.39
ERCC1-201ENST00000013807 XKR4Q5GH76 650 aa17.49■□□□□ 0.39
ERCC1-201ENST00000013807 RTP2Q5QGT7 225 aa17.49■□□□□ 0.39
ERCC1-201ENST00000013807 NT5DC1Q5TFE4 455 aa17.49■□□□□ 0.39
ERCC1-201ENST00000013807 EEF1DP3Q658K8 133 aa17.49■□□□□ 0.39
ERCC1-201ENST00000013807 PDXDC1Q6P996 788 aa17.49■□□□□ 0.39
ERCC1-201ENST00000013807 PALB2Q86YC2 1186 aa17.49■□□□□ 0.39
ERCC1-201ENST00000013807 TMEM105Q8N8V8 129 aa17.49■□□□□ 0.39
ERCC1-201ENST00000013807 SMG7Q92540 1137 aaKnown RBP17.49■□□□□ 0.39
ERCC1-201ENST00000013807 PPP1R10Q96QC0 940 aaKnown RBP17.49■□□□□ 0.39
ERCC1-201ENST00000013807 NTPCRQ9BSD7 190 aaKnown RBP17.49■□□□□ 0.39
ERCC1-201ENST00000013807 CXCL16Q9H2A7 254 aa17.49■□□□□ 0.39
ERCC1-201ENST00000013807 TMEM134Q9H6X4 195 aa17.49■□□□□ 0.39
ERCC1-201ENST00000013807 C17orf75Q9HAS0 396 aa17.49■□□□□ 0.39
ERCC1-201ENST00000013807 TNFSF13BQ9Y275 285 aa17.49■□□□□ 0.39
ERCC1-201ENST00000013807 CFAP54Q96N23 3096 aa17.49■□□□□ 0.39
ERCC1-201ENST00000013807 PHLPP2Q6ZVD8 1323 aa17.48■□□□□ 0.39
ERCC1-201ENST00000013807 K7ERI5 159 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms