RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Ccdc169Q8BXX9 214 aa12.29□□□□□ -0.44
Vps54-202ENSMUST00000109578 Klhl11Q8CE33 709 aa12.29□□□□□ -0.44
Vps54-202ENSMUST00000109578 Cplx3Q8R1B5 158 aa12.29□□□□□ -0.44
Vps54-202ENSMUST00000109578 Eno1P17182 434 aaKnown RBP12.29□□□□□ -0.44
Vps54-202ENSMUST00000109578 Gtf2bP62915 316 aa12.29□□□□□ -0.44
Vps54-202ENSMUST00000109578 Skap1Q3UUV5 355 aa12.29□□□□□ -0.44
Vps54-202ENSMUST00000109578 Odr4Q4PJX1 447 aa12.29□□□□□ -0.44
Vps54-202ENSMUST00000109578 Cnot7Q60809 285 aa12.29□□□□□ -0.44
Vps54-202ENSMUST00000109578 Tfap2bQ61313 459 aa12.29□□□□□ -0.44
Vps54-202ENSMUST00000109578 Fmnl3Q6ZPF4 1028 aa12.29□□□□□ -0.44
Vps54-202ENSMUST00000109578 Mill1Q8HWE7 395 aa12.29□□□□□ -0.44
Vps54-202ENSMUST00000109578 Trmt10bQ9D075 318 aa12.29□□□□□ -0.44
Vps54-202ENSMUST00000109578 PycardQ9EPB4 193 aa12.29□□□□□ -0.44
Vps54-202ENSMUST00000109578 Prmt2Q9R144 448 aa12.29□□□□□ -0.44
Vps54-202ENSMUST00000109578 Serpinb6eI7HJI3 429 aa12.29□□□□□ -0.44
Vps54-202ENSMUST00000109578 Npr3P70180 536 aa12.29□□□□□ -0.44
Vps54-202ENSMUST00000109578 SpertQ32MG2 446 aa12.29□□□□□ -0.44
Vps54-202ENSMUST00000109578 Vars2Q3U2A8 1060 aa12.29□□□□□ -0.44
Vps54-202ENSMUST00000109578 Syne3Q4FZC9 975 aa12.29□□□□□ -0.44
Vps54-202ENSMUST00000109578 Ccdc125Q5U465 500 aa12.29□□□□□ -0.44
Vps54-202ENSMUST00000109578 AdigQ8R400 80 aa12.29□□□□□ -0.44
Vps54-202ENSMUST00000109578 Cntnap5cQ0V8T7 1305 aa12.29□□□□□ -0.44
Vps54-202ENSMUST00000109578 Apol7bB1AQP7 369 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Unc13dB2RUP2 1085 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Pitpnm1O35954 1243 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Abi2P62484 446 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Edem3Q2HXL6 931 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Tmem120bQ3TA38 339 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Apol7eQ3UZ24 369 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Cyp3a11Q64459 504 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 AgpsQ8C0I1 645 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Atp5c1Q91VR2 298 aaKnown RBP12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Sv2aQ9JIS5 742 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Tjp3Q9QXY1 905 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Phf2Q9WTU0 1096 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Gm4758L7N258 96 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Vmn2r15L7N2A0 855 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Mt-CybP00158 381 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Ifnb1P01575 182 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 CtshP49935 333 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Spink5Q148R4 1017 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Inpp4bQ6P1Y8 924 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Zfp341Q6PGC9 846 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Zswim5Q80TC6 1188 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Znf618Q80YY7 953 aaKnown RBP12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Ces1fQ91WU0 561 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Med15Q924H2 789 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Sec14l2Q99J08 403 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 NkapQ9D0F4 415 aaKnown RBP12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Ptprn2P80560 1001 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Trim21Q62191 470 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Pih1h3bQ8C6P5 218 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Thoc1Q8R3N6 657 aaKnown RBP12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Net1Q9Z206 595 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Frmpd3A0A140LIW3 1774 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Gm5936A2BG95 728 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Gm5640A3KG49 728 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Alkbh1P0CB42 389 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Aars2Q14CH7 980 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Q3UTZ3 580 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Elf1Q60775 612 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Stxbp2Q64324 593 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Tshz2Q68FE9 1030 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Kbtbd3Q8BHI4 607 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 A430089I19RikQ8C9W1 407 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Spire2Q8K1S6 718 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Olfr1502Q8VG66 316 aa12.28□□□□□ -0.44
Vps54-202ENSMUST00000109578 Fam205a1D3YZF6 1314 aa12.27□□□□□ -0.44
Vps54-202ENSMUST00000109578 Gm28360A0A087WR25 190 aa12.27□□□□□ -0.44
Vps54-202ENSMUST00000109578 Slc1a1P51906 523 aa12.27□□□□□ -0.44
Vps54-202ENSMUST00000109578 Uhmk1P97343 419 aa12.27□□□□□ -0.44
Vps54-202ENSMUST00000109578 Q6DFW0 481 aa12.27□□□□□ -0.44
Vps54-202ENSMUST00000109578 Rassf6Q80UQ2 353 aa12.27□□□□□ -0.44
Vps54-202ENSMUST00000109578 Slc17a8Q8BFU8 601 aa12.27□□□□□ -0.44
Vps54-202ENSMUST00000109578 Ptrh1Q8BW00 204 aa12.27□□□□□ -0.44
Vps54-202ENSMUST00000109578 Pnma1Q8C1C8 353 aa12.27□□□□□ -0.44
Vps54-202ENSMUST00000109578 Tmem161bQ8C2L6 487 aa12.27□□□□□ -0.44
Vps54-202ENSMUST00000109578 Nr3c2Q8VII8 978 aa12.27□□□□□ -0.44
Vps54-202ENSMUST00000109578 Vps36Q91XD6 386 aa12.27□□□□□ -0.44
Vps54-202ENSMUST00000109578 Pcdhb3Q91XZ7 784 aa12.27□□□□□ -0.44
Vps54-202ENSMUST00000109578 Ftsj3Q9DBE9 838 aaKnown RBP12.27□□□□□ -0.44
Vps54-202ENSMUST00000109578 XdhQ00519 1335 aa12.27□□□□□ -0.44
Vps54-202ENSMUST00000109578 Gm21973F6WEZ7 68 aa12.27□□□□□ -0.45
Vps54-202ENSMUST00000109578 Art2bO35975 289 aa12.27□□□□□ -0.45
Vps54-202ENSMUST00000109578 Casp14O89094 257 aa12.27□□□□□ -0.45
Vps54-202ENSMUST00000109578 Oprl1P35377 367 aa12.27□□□□□ -0.45
Vps54-202ENSMUST00000109578 Adcy8P97490 1249 aa12.27□□□□□ -0.45
Vps54-202ENSMUST00000109578 Ubap1Q8BH48 502 aa12.27□□□□□ -0.45
Vps54-202ENSMUST00000109578 Gnl3Q8CI11 538 aaKnown RBP12.27□□□□□ -0.45
Vps54-202ENSMUST00000109578 Uroc1Q8VC12 676 aa12.27□□□□□ -0.45
Vps54-202ENSMUST00000109578 Rnf135Q9CWS1 417 aa12.27□□□□□ -0.45
Vps54-202ENSMUST00000109578 Smok2bQ9QYZ3 484 aa12.27□□□□□ -0.45
Vps54-202ENSMUST00000109578 Smok2aQ9QYZ6 504 aa12.27□□□□□ -0.45
Vps54-202ENSMUST00000109578 Mta2Q9R190 668 aa12.27□□□□□ -0.45
Vps54-202ENSMUST00000109578 Ambra1A2AH22 1300 aa12.27□□□□□ -0.45
Vps54-202ENSMUST00000109578 6030498E09RikB1AX85 169 aa12.27□□□□□ -0.45
Vps54-202ENSMUST00000109578 Gm15448F6PZL4 682 aa12.27□□□□□ -0.45
Vps54-202ENSMUST00000109578 Diaph2O70566 1098 aa12.27□□□□□ -0.45
Vps54-202ENSMUST00000109578 Rps6P62754 249 aaKnown RBP12.27□□□□□ -0.45
Vps54-202ENSMUST00000109578 Klra3Q64329 266 aa12.27□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms