RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Pop1Q8K205 1045 aa12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Il17cQ8K4C5 194 aa12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Bzw2Q91VK1 419 aaKnown RBP12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Calml4Q91WQ9 153 aa12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Pcdhga10Q91XY9 930 aa12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Mapk8Q91Y86 384 aa12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Q922M7 232 aa12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Syf2Q9D198 242 aaKnown RBP12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Grtp1Q9D3N8 359 aa12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Klc4Q9DBS5 619 aa12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Rbp7Q9EPC5 134 aa12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Usp34Q6ZQ93 3582 aa12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 XlrP05531 208 aa12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 PklrP53657 574 aa12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Zc3h15Q3TIV5 426 aaKnown RBP12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Frmd8Q3UFK8 466 aa12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Gm5935Q497S0 212 aa12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Phactr4Q501J7 694 aa12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 FdxrQ61578 494 aa12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Gemin4Q6P6L6 1058 aaKnown RBP12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 SugctQ7TNE1 436 aa12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Llgl1Q80Y17 1036 aa12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Dnajc18Q9CZJ9 357 aa12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Jph2Q9ET78 696 aa12.15□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Gm44503E9PYU5 387 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 SfnO70456 248 aaKnown RBP12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 InhbcP55104 352 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 MlxipQ2VPU4 917 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Q3TTJ4 293 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Tatdn3Q3U1C6 294 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Ksr1Q61097 873 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 AlcamQ61490 583 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Tas2r134Q7TQB0 298 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 TufmQ8BFR5 452 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 EtnpplQ8BWU8 499 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Kat5Q8CHK4 513 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 SmtnQ921U8 923 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Eps8l2Q99K30 729 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Tmx2Q9D710 295 aaKnown RBP12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Cbx8Q9QXV1 362 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Cyp2c68K7N6C2 491 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Ccnd2P30280 289 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 AdssP46664 456 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Adamts10P58459 1104 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Gtf2bP62915 316 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Pla2g6P97819 807 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Cyp11b1Q3TG86 501 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 TchpQ3TVW5 497 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Tgoln2Q62314 363 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Ints8Q80V86 995 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Pkn2Q8BWW9 983 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Adgra1Q8C4G9 578 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Rtp1Q8C8C1 263 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Tmcc3Q8R310 477 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Ddx39aQ8VDW0 427 aaKnown RBP12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Nmrk1Q91W63 195 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 CalcbQ99MP3 130 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Nudt5Q9JKX6 218 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Ankrd2Q9WV06 328 aa12.14□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Akap2O54931 893 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 H2afzP0C0S6 128 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Cyp2c37P56654 490 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Trim43bP86448 445 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Tarbp2P97473 365 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 H2afvQ3THW5 128 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 TbckQ8BM85 762 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Nudt13Q8JZU0 352 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Med15Q924H2 789 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Mipol1Q9D9F8 279 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Peg12Q9WVA7 283 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Kcnq2Q9Z351 759 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Pgap3A2A559 320 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Cd70O55237 195 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Pik3caP42337 1068 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Smyd1P97443 490 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Skap2Q3UND0 358 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Itih3Q61704 889 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Styk1Q6J9G1 429 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Ano5Q75UR0 904 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Cyfip1Q7TMB8 1253 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Spag7Q7TNE3 227 aaKnown RBP12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 R3hdm2Q80TM6 1044 aaKnown RBP12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Trim65Q8BFW4 522 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Rnf38Q8BI21 518 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Slc4a7Q8BTY2 1034 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Lmo3Q8BZL8 145 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Chn1Q91V57 459 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Zfp617Q91WM0 559 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Acsl3Q9CZW4 720 aaKnown RBP12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Tnip1Q9WUU8 647 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Speer3W4VSP1 261 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Odf2A3KGV1 830 aaKnown RBP12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 ChkbO55229 394 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Rc3h2P0C090 1187 aaKnown RBP12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 PrkceP16054 737 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Wnt7bP28047 349 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 AdkP55264 361 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Actr2P61161 394 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Rhox12Q4TU81 186 aa12.13□□□□□ -0.47
Ddx55-201ENSMUST00000071057 Ddx55Q6ZPL9 600 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms