RNA–Protein interactions for RNA: ENSMUST00000052708.6

Ckap2l-201, Transcript of Cytoskeleton-associated protein 2-like, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap2l, Length 3,137 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2l-201ENSMUST00000052708 Srebf2Q3U1N2 1130 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 NntQ61941 1086 aaKnown RBP9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Cd180Q62192 661 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Ntan1Q64311 310 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Klhl17Q6TDP3 640 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Znf507Q6ZPY5 941 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Nacc1Q7TSZ8 514 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Elac2Q80Y81 831 aaKnown RBP9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Pkn2Q8BWW9 983 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 MtrrQ8C1A3 696 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Ago2Q8CJG0 860 aaKnown RBP9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Q8VDP2 222 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Itgbl1Q8VDV0 494 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Pqbp1Q91VJ5 263 aaKnown RBP9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 PpanQ91YU8 470 aaKnown RBP9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 CtsqQ91ZF4 343 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 SyncQ9EPM5 470 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Slc5a4aQ9ET37 656 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Fkbp1bQ9Z2I2 108 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Scgb2b11A0A087WR49 112 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Slc6a21A0A1B0GSD2 748 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Gm12800B1AUV4 484 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Olfr456B2RT27 312 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 1700064H15RikD3Z4D4 81 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Gm12794L7MTS5 483 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Lrrc6O88978 473 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 ItpripQ3TNL8 555 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Erich4Q3UNU4 136 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Abi3bpQ59IW6 1179 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Phlda1Q62392 405 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Baiap3Q80TT2 1134 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Ankfy1Q810B6 1169 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 6820408C15RikQ8BJX2 354 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Ccdc169Q8BXX9 214 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Leg1Q8C6C9 337 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Tbc1d13Q8R3D1 400 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Olfr458Q8VF80 313 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Olfr457Q8VGP5 313 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Plagl2Q925T4 496 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Psmd6Q99JI4 389 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Gimap3Q99MI6 301 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Tmem39aQ9CYC3 486 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Syf2Q9D198 242 aaKnown RBP9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 AvenQ9D9K3 342 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Cpsf3Q9QXK7 684 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Akt3Q9WUA6 479 aa9.76□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Gucy2dA0A0U1RPR8 1117 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Gm10801F7C7Q0 168 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Nck2O55033 380 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Scp2P32020 547 aaKnown RBP9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Arf4P61750 180 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Vsnl1P62761 191 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Q5XFZ0 217 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 GartQ64737 1010 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Epn1Q80VP1 575 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Vipas39Q8BGQ1 491 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Gpt2Q8BGT5 522 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Fam126bQ8C729 530 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Calcoco1Q8CGU1 691 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Eif3cQ8R1B4 911 aaKnown RBP9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Rpp40Q8R1F9 363 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 B4galt3Q91YY2 395 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Erp44Q9D1Q6 406 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Desi2Q9D291 194 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 4931423N10RikQ9D4J9 382 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Klhl40Q9D783 621 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Mmrn2A6H6E2 943 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 DgkhD3YXJ0 1156 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Speer4f2E9Q366 295 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Gm6588E9Q3K0 461 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Nfxl1E9Q8I7 918 aaKnown RBP9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Rgs22G3UYX5 1258 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 StrnO55106 780 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Slc3a2P10852 526 aaKnown RBP9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 RarbP22605 482 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 TdgP56581 421 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Nfe2Q07279 373 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Tfdp1Q08639 410 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Tcerg1lQ3B807 590 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Mpzl3Q3V3F6 237 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Asap3Q5U464 904 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Hgh1Q8C3I8 393 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Cdk17Q8K0D0 523 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Rnf208Q8K0W3 265 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Pop1Q8K205 1045 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Spata4Q8K3V1 295 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Stap2Q8R0L1 411 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Fubp1Q91WJ8 651 aaKnown RBP9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Rrp1bQ91YK2 724 aaKnown RBP9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Six6os1Q9CTN5 574 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Castor1Q9CWQ8 331 aa9.75□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Gm28042B7ZCM9 1014 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Kcnu1O54982 1121 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Cyp2c37P56654 490 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Actn4P57780 912 aaKnown RBP9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Mphosph8Q3TYA6 858 aaKnown RBP9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Ppp1r7Q3UM45 361 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Pla2g4cQ64GA5 597 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Git1Q68FF6 770 aa9.74□□□□□ -0.85
Ckap2l-201ENSMUST00000052708 Cyp2c54Q6XVG2 490 aa9.74□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 41.7 ms