RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Hoxd10P28359 340 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Sh3bp1P55194 680 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Nxf2Q4ZGD8 691 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Ccdc42Q5SV66 316 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Mapk6Q61532 720 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Git1Q68FF6 770 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Vcpip1Q8CDG3 1220 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Lamtor4Q8CF66 99 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Vps18Q8R307 973 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Mtmr14Q8VEL2 648 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Ube2sQ921J4 223 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Arfgap2Q99K28 520 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Gimap3Q99MI6 301 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Dbndd2Q9CRD4 158 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Sertad2Q9JJG5 309 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Trpc3Q9QZC1 836 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 1700017N19RikA0A087WPJ1 469 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Hnrnph3D3Z3N4 346 aaKnown RBP9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Itgb7P26011 806 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Mmp3P28862 477 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 GssP51855 474 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Paxbp1P58501 919 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Tbx3P70324 741 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Mpzl3Q3V3F6 237 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Ppp1r1bQ60829 194 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Phlda1Q62392 405 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Tlr11Q6R5P0 926 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Klhl17Q6TDP3 640 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Llgl1Q80Y17 1036 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Stap2Q8R0L1 411 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Uap1Q91YN5 522 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Q91Z58 1206 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Card14Q99KF0 999 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Trmt10bQ9D075 318 aa9.38□□□□□ -0.91
Trim39-201ENSMUST00000042717 Gm4846B2RWH8 538 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Gm6133B2RY53 190 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Sclt1G5E861 688 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Nkx2-5P42582 318 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Oas1fQ14AZ4 364 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Fam198aQ3UY90 562 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Myl6Q60605 151 aaKnown RBP9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 HarsQ61035 509 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Bcar1Q61140 874 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Dsg1aQ61495 1057 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 FAM120AQ6A0A9 1112 aaKnown RBP9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Q6GQV0 436 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Elac2Q80Y81 831 aaKnown RBP9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Qsox1Q8BND5 748 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Igdcc4Q9EQS9 1252 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Cpsf3Q9QXK7 684 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Efcab12V9GXH0 673 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Card6E9PWH2 1175 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 2010300C02RikE9Q3M9 1175 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Cpsf2O35218 782 aaKnown RBP9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Pdia4P08003 638 aaKnown RBP9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Ano9P86044 747 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Kcnq1P97414 668 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 EnahQ03173 802 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Ano7Q14AT5 859 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 MlxipQ2VPU4 917 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Tatdn3Q3U1C6 294 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Mansc4Q3UU94 337 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Ces5aQ6AW46 575 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Kcnt1Q6ZPR4 1224 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Olfml3Q8BK62 406 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Pi4kbQ8BKC8 816 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Rint1Q8BZ36 792 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Lonp1Q8CGK3 949 aaKnown RBP9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Tbc1d13Q8R3D1 400 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Vps36Q91XD6 386 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Mageb16Q9CWV4 363 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Adgrf5G5E8Q8 1348 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Tcp10bE9PYJ0 438 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Taf4bG5E8Z2 855 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Xirp1O70373 1129 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Nap1l1P28656 391 aaKnown RBP9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Stat4P42228 749 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Kcnd1Q03719 651 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Sorbs1Q62417 1290 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Hgh1Q8C3I8 393 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Otud6bQ8K2H2 294 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Ablim1Q8K4G5 861 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Fubp1Q91WJ8 651 aaKnown RBP9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Zfyve19Q9DAZ9 389 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Adam22Q9R1V6 904 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Wnt8bQ9WUD6 350 aa9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Atp6v0a1Q9Z1G4 839 aaKnown RBP9.37□□□□□ -0.91
Trim39-201ENSMUST00000042717 Gm12800B1AUV4 484 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Unc13dB2RUP2 1085 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Gm10110D3Z5M2 615 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Gm12794L7MTS5 483 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Tnnc2P20801 160 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Cyp2c38P56655 490 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Myo1fP70248 1099 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Abi3bpQ59IW6 1179 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 IqceQ6PCQ0 778 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Lrrn2Q6PHP6 730 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Olfr23Q7TRX4 325 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Vat1lQ80TB8 417 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 WhrnQ80VW5 918 aa9.36□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 51.3 ms