RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Krt32Q62168 407 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Gpatch2lQ6PE65 482 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Znf12Q7TSI0 686 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Phactr3Q8BYK5 558 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Snx16Q8C080 344 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Adamts2Q8C9W3 1213 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Ftsj1Q8CBC7 324 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Emc2Q9CRD2 297 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Prpsap1Q9D0M1 356 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Setd1aE9PYH6 1716 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Gap43P06837 227 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Q3KNL4 93 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Leg1Q8C6C9 337 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Trip10Q8CJ53 603 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Sf3b3Q921M3 1217 aaKnown RBP9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Dach2Q925Q8 634 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Capn10Q9ESK3 666 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Disp2Q8CIP5 1345 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Atoh1P48985 351 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Lrch1P62046 709 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Capn13Q3UW68 665 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Nr3c2Q8VII8 978 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Dnajc3Q91YW3 504 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Prl2c1Q5SVL9 228 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Zfp418Q8BFS8 652 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Abraxas1Q8BPZ8 407 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 TwnkQ8CIW5 685 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Tdrd7Q8K1H1 1086 aaKnown RBP9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 ZwilchQ8R060 589 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Trim5E9PV98 497 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Tpp1O89023 562 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Impdh2P24547 514 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Khdrbs1Q60749 443 aaKnown RBP9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Trpa1Q8BLA8 1125 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Ttc26Q8BS45 554 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 CitP49025 2055 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Acad12D3Z7X0 555 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Gm3371F7CQW8 167 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Lgr6Q3UVD5 967 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Clca4aQ6Q473 924 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Dnajc6Q80TZ3 938 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Usp15Q8R5H1 981 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Ifnb1P01575 182 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 MagohP61327 146 aaKnown RBP9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Ifnl2Q4VK74 193 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Iqcb1Q8BP00 598 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 MagohbQ9CQL1 146 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Gm5134E9QAB5 671 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Vamp7P70280 220 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Mettl17Q3U2U7 461 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Klrg2Q3UM83 387 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Afg1lQ3V384 480 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Trim38Q5SZ99 471 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Rasa3Q60790 834 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Kcnf1Q7TSH7 493 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Ubxn10Q8BG34 277 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Q8C5C9 218 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Olfr805Q8VFI4 319 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Pcdha11Q91Y19 950 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Ranbp17Q99NF8 1088 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Gjb6P70689 261 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Gprc5aQ8BHL4 356 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Hdac11Q91WA3 347 aa9.29□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Cyp4f17G3UW78 524 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Cyp4f16Q99N17 524 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Adgrf5G5E8Q8 1348 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Cyp2j6O54750 501 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Ephx4Q6IE26 359 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 DaglaQ6WQJ1 1044 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 N4bp3Q8C7U1 537 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Ints4Q8CIM8 964 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Trub2Q91WG3 331 aaKnown RBP9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Med15Q924H2 789 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Grk2Q99MK8 689 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Syf2Q9D198 242 aaKnown RBP9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Gtf2ird1Q9JI57 1104 aaKnown RBP9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Cdc42bpaQ3UU96 1719 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Krt28A6BLY7 462 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Olfr310B2RVZ1 332 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 SfnO70456 248 aaKnown RBP9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Tmc4Q7TQ65 694 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Calhm6Q8C9E8 313 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Plekhh3Q8VCE9 796 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Q91WD4 421 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 YdjcQ14BV6 310 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Scnn1aQ61180 699 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Gramd1bQ80TI0 738 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Arhgap15Q811M1 481 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Tmem117Q8BH18 514 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Ccdc62E9PVD1 701 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Cops5O35864 334 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Rps6P62754 249 aaKnown RBP9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Klhl38Q8BSF5 581 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Ccdc65Q8VHI7 493 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Uap1Q91YN5 522 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Mrpl2Q9D773 306 aaKnown RBP9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Cul1Q9WTX6 776 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Efcab12V9GXH0 673 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 Plekha5E9Q6H8 1269 aa9.28□□□□□ -0.92
Ttc28-201ENSMUST00000040111 CtshP49935 333 aa9.28□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms