RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Dync1li2Q6PDL0 492 aaKnown RBP11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Cyfip1Q7TMB8 1253 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Bicd1Q8BR07 835 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Lmo3Q8BZL8 145 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Btbd6Q8K2J9 488 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Ctage5Q8R311 779 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Caap1Q8VDY9 356 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 SfpqQ8VIJ6 699 aaKnown RBP11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Havcr2Q8VIM0 281 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Spats2lQ91WJ7 558 aaKnown RBP11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Rnf112Q96DY5 654 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Ergic2Q9CR89 377 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Cd2bp2Q9CWK3 342 aaKnown RBP11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 NkapQ9D0F4 415 aaKnown RBP11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Mipol1Q9D9F8 279 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Rnf138rt1Q9D9M9 248 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Jph2Q9ET78 696 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Entpd5Q9WUZ9 427 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Cog1Q9Z160 980 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Ggt5Q9Z2A9 573 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 FscbA1EGX6 1074 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Cfap70D3YVL2 1141 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Zfp105G3X9I0 524 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 4933406M09RikG3XA12 479 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Art2bO35975 289 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Itgb5O70309 798 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Prkg1P0C605 671 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 ClgnP52194 611 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Palb2Q3U0P1 1104 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Lgr6Q3UVD5 967 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Pja2Q80U04 707 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Anapc5Q8BTZ4 740 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 PpatQ8CIH9 517 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Tdrd7Q8K1H1 1086 aaKnown RBP11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 AdigQ8R400 80 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Aipl1Q924K1 328 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Sppl3Q9CUS9 384 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Chordc1Q9D1P4 331 aaKnown RBP11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Rbm31yQ9D3U4 565 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Sapcd2Q9D818 391 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Nudt5Q9JKX6 218 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Tjp3Q9QXY1 905 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Gyg1Q9R062 333 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Zswim8Q3UHH1 1832 aaKnown RBP11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Gm11549A0A286YD83 63 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Eddm13E9Q7F5 164 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Tagap1P0CAX8 505 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Rps6P62754 249 aaKnown RBP11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Trim80Q3V061 624 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Hif1aQ61221 836 aaKnown RBP11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Fgfr1opQ66JX5 399 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Lrig3Q6P1C6 1117 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Gpr156Q6PCP7 798 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Ccdc169Q8BXX9 214 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Dennd1aQ8K382 1016 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Nr3c2Q8VII8 978 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Tom1l1Q923U0 474 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Cep19Q9CQA8 163 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 GrapQ9CX99 217 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Lypla2Q9WTL7 231 aa11.41□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Gm4297D3YWB7 211 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Speer2E9Q9U2 264 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Gnat1P20612 350 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Xrcc5P27641 732 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Pkn1P70268 946 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Gxylt1Q3UHH8 404 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Cyfip2Q5SQX6 1253 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 AlcamQ61490 583 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Aldh5a1Q8BWF0 523 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Calhm6Q8C9E8 313 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Lrrc14Q8VC16 493 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Mrpl11Q9CQF0 192 aaKnown RBP11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Ccdc124Q9D8X2 217 aaKnown RBP11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Rabgef1Q9JM13 491 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Mia3Q8BI84 1930 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Apol8A2VDH7 339 aaKnown RBP11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Zfp266E9Q2S7 604 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Myo1eE9Q634 1107 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 CtshP49935 333 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Klrb1Q0ZUP1 214 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Pbxip1Q3TVI8 727 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Ndufaf2Q59J78 168 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Tom1l2Q5SRX1 507 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Sun2Q8BJS4 731 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Ythdf3Q8BYK6 585 aaKnown RBP11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 GlmnQ8BZM1 596 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Kiaa0391Q8JZY4 584 aaKnown RBP11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Snrnp27Q8K194 155 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Pcdhb12Q91Y07 789 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Asb11Q9CQ31 323 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Q9D2Q3 444 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Rasgef1cQ9D300 466 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 4930449I24RikQ9D5E3 319 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Prmt2Q9R144 448 aa11.4□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Zfp457L7N1X4 647 aa11.39□□□□□ -0.59
Ptcd1-201ENSMUST00000031628 Dhx15O35286 795 aaKnown RBP11.39□□□□□ -0.59
Ptcd1-201ENSMUST00000031628 AdssP46664 456 aa11.39□□□□□ -0.59
Ptcd1-201ENSMUST00000031628 Drc1Q3USS3 753 aa11.39□□□□□ -0.59
Ptcd1-201ENSMUST00000031628 Cyp2c67Q569X9 491 aa11.39□□□□□ -0.59
Ptcd1-201ENSMUST00000031628 Ppp2r2aQ6P1F6 447 aa11.39□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms