RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Rtl9Q32KG4 1339 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Gm5814J3QP80 125 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 OatP29758 439 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Smarcad1Q04692 1021 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Clasp2Q8BRT1 1286 aaKnown RBP13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Gnl3Q8CI11 538 aaKnown RBP13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Plcg2Q8CIH5 1265 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Zbtb44Q8R0A2 453 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Mrfap1Q9CQL7 125 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Adrm1Q9JKV1 407 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Krt27Q9Z320 448 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Casq2O09161 415 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 RalaP63321 206 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Esyt2Q3TZZ7 845 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 E2f8Q58FA4 860 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Ndufaf2Q59J78 168 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Klhl14Q69ZK5 630 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Kif11Q6P9P6 1052 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Ces4aQ8R0W5 563 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Rnf112Q96DY5 654 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Nme5Q99MH5 211 aa13.54□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Gm9774A0A0A6YVU8 407 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 FscbA1EGX6 1074 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 DesP31001 469 aaKnown RBP13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 CpQ61147 1061 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 GmipQ6PGG2 971 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Rfx6Q8C7R7 927 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Ccdc80Q8R2G6 949 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Chchd3Q9CRB9 227 aaKnown RBP13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Mms19Q9D071 1031 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Ttc33Q9D6K7 262 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Nsmce1Q9D720 266 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Rnf103Q9R1W3 683 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Rps6ka2Q9WUT3 733 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Greb1lB9EJV3 1913 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Nub1P54729 614 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 E2f5Q61502 335 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 R3hdm2Q80TM6 1044 aaKnown RBP13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Slc9b1Q8C0X2 565 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Trim60Q8VI40 466 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Patl2A2ARM1 529 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Trappc11B2RXC1 1133 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Gm379J3QQ19 296 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Fermt1P59113 677 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 LxnP70202 222 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Mks1Q5SW45 561 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Nr2e1Q64104 385 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Chn2Q80XD1 332 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Kiaa0319lQ8K135 1048 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Slc8a3S4R2P9 928 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Znf804aA2AKY4 1200 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Trim43cP86449 446 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Pstpip1P97814 415 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Ubn1Q4G0F8 1135 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Phc1Q64028 1012 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Jade1Q6ZPI0 834 aaKnown RBP13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Fam114a2Q8VE88 497 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 ChiaQ91XA9 473 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Lpgat1Q91YX5 370 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Psip1Q99JF8 528 aaKnown RBP13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Hspbp1Q99P31 357 aaKnown RBP13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Psmd9Q9CR00 222 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 PycardQ9EPB4 193 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Sucla2Q9Z2I9 463 aa13.53□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Lrrc38A2VDH3 298 aa13.52□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Krt36B1AQ75 473 aa13.52□□□□□ -0.24
Clcn3-201ENSMUST00000004430 6030498E09RikB1AX85 169 aa13.52□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Ccdc68Q8BVC4 333 aa13.52□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Pkn2Q8BWW9 983 aa13.52□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Kat5Q8CHK4 513 aa13.52□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Snrnp27Q8K194 155 aa13.52□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Pcdhb12Q91Y07 789 aa13.52□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Ppp1r3aQ99MR9 1089 aa13.52□□□□□ -0.24
Clcn3-201ENSMUST00000004430 FignQ9ERZ6 759 aa13.52□□□□□ -0.24
Clcn3-201ENSMUST00000004430 Mocs3A2BDX3 460 aaKnown RBP13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Gsg1l2M0QWL6 290 aa13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Cyp2j6O54750 501 aa13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Zfy1P10925 782 aa13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Casp2P29594 452 aa13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 FdxrQ61578 494 aa13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 CrkQ64010 304 aa13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 AarsQ8BGQ7 968 aa13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Dennd2aQ8C4S8 1000 aa13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Trex1Q91XB0 314 aa13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Tmod2Q9JKK7 351 aa13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Anapc7Q9WVM3 565 aa13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Zfp266E9Q2S7 604 aa13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 PtenO08586 403 aa13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Exoc7O35250 697 aa13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Trim43bP86448 445 aa13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 CcnjlQ5SRT8 387 aa13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Hsph1Q61699 858 aaKnown RBP13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Atp2a3Q64518 1038 aa13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Tas2r109Q7M707 316 aa13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 A430089I19RikQ8C9W1 407 aa13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Arhgap29Q8CGF1 1266 aa13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Rnf6Q9DBU5 667 aa13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Gyg1Q9R062 333 aa13.52□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Gm4841E9QAA8 417 aa13.51□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Foxm1O08696 760 aa13.51□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms