RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Fnbp4Q6ZQ03 1031 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 EtnpplQ8BWU8 499 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Iffo1Q8BXL9 562 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Rint1Q8BZ36 792 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Commd10Q8JZY2 202 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Mrfap1Q9CQL7 125 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Mis12Q9CY25 206 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Ftsj3Q9DBE9 838 aaKnown RBP20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 PycardQ9EPB4 193 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 IdeQ9JHR7 1019 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Smok2bQ9QYZ3 484 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Smok2aQ9QYZ6 504 aa20.05■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Ces1cP23953 554 aa20.04■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Rufy4Q3TYX8 563 aa20.04■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Tcf12Q61286 706 aa20.04■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Krt12Q64291 487 aa20.04■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Slc18a1Q8R090 521 aa20.04■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Mmrn2A6H6E2 943 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Gm21973F6WEZ7 68 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Atp9aO70228 1047 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Psmc5P62196 406 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Mfsd14aP70187 490 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Lig3P97386 1015 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Zfp957Q3UT76 567 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Phactr4Q501J7 694 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Pnma1Q8C1C8 353 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Pagr1aQ99L02 253 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 MesdQ9ERE7 224 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Rnf25Q9QZR0 456 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Net1Q9Z206 595 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Gpr161B2RPY5 545 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Rap1gds1E9Q912 607 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Gm10436L7N1Y3 520 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Casp14O89094 257 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Fgfr2P21803 821 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 TraddQ3U0V2 310 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Taok1Q5F2E8 1001 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 A1cfQ5YD48 595 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Vmn1r64Q8R2B8 320 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Hars2Q99KK9 505 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Ccdc124Q9D8X2 217 aaKnown RBP20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Olr1Q9EQ09 363 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Usp29Q9ES63 869 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Gtf2ird1Q9JI57 1104 aaKnown RBP20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Lactbl1S4R213 581 aa20.03■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Gm5936A2BG95 728 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Gm5640A3KG49 728 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Gm3182K7N6T8 263 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Cacna2d1O08532 1103 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Ptprn2P80560 1001 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Odr4Q4PJX1 447 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Zfp341Q6PGC9 846 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Atg4cQ811C2 458 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Ccdc169Q8BXX9 214 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 AgpsQ8C0I1 645 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Pih1h3bQ8C6P5 218 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Col23a1Q8K4G2 532 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Tmx2Q9D710 295 aaKnown RBP20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Sv2aQ9JIS5 742 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Znf804aA2AKY4 1200 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Pus7B7ZNL8 666 aaKnown RBP20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Gm45837F7D3W5 961 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Gm4758L7N258 96 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Trmt1Q3TX08 663 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 StilQ60988 1262 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Tgoln2Q62314 363 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Klra3Q64329 266 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Senp6Q6P7W0 1132 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Kbtbd3Q8BHI4 607 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 A430089I19RikQ8C9W1 407 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Pde2aQ922S4 916 aa20.02■□□□□ 0.8
Shkbp1-201ENSMUST00000003857 Tspoap1Q7TNF8 1846 aa20.02■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Kcnk16G5E845 292 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 GssP51855 474 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Dab2ipQ3UHC7 1189 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Vps41Q5KU39 853 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Plk4Q64702 925 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Cyp2d26Q8CIM7 500 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Rassf9Q8K342 435 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Slc26a7Q8R2Z3 656 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Snapc2Q91XA5 359 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Serpinb3bQ9D1Q5 387 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Sf3a3Q9D554 501 aaKnown RBP20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 4930449I24RikQ9D5E3 319 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Ecel1Q9JMI0 775 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Ptgdr2Q9Z2J6 382 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Per1O35973 1291 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Igsf9Q05BQ1 1179 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Pdzph1Q8BGR1 1238 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Epc2Q8C0I4 808 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Rsad2Q8CBB9 362 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Tdrd1Q99MV1 1172 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Hdac9Q99N13 588 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Gpatch1Q9DBM1 930 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Znf704Q9ERQ3 566 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 NagaQ9QWR8 415 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 H2-OaQ9QWV1 250 aa20.01■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Zscan4-ps3A0A1B0GRH6 506 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Zscan4-ps2A0A1C7CYU6 506 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Rfx8D3YU81 596 aa20■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms