RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W LOA1Q06508 300 aa2.35□□□□□ -2.03
RPN9YDR427W SEN34P39707 275 aa2.34□□□□□ -2.03
RPN9YDR427W RTT105P40063 208 aa2.34□□□□□ -2.03
RPN9YDR427W MEP1P40260 492 aa2.34□□□□□ -2.03
RPN9YDR427W ALG9P53868 555 aaKnown RBP2.34□□□□□ -2.03
RPN9YDR427W SWT21P53873 357 aaPredicted RBP2.34□□□□□ -2.03
RPN9YDR427W SPP2Q02521 185 aa2.34□□□□□ -2.03
RPN9YDR427W VPS60Q03390 229 aa2.34□□□□□ -2.03
RPN9YDR427W YLL007CQ07799 665 aa2.34□□□□□ -2.03
RPN9YDR427W KRE6P32486 720 aa2.33□□□□□ -2.04
RPN9YDR427W COT1P32798 439 aa2.33□□□□□ -2.04
RPN9YDR427W SPL2P38839 148 aa2.33□□□□□ -2.04
RPN9YDR427W MRX5P47007 382 aa2.33□□□□□ -2.04
RPN9YDR427W CDC14Q00684 551 aa2.33□□□□□ -2.04
RPN9YDR427W TRM44Q02648 567 aaKnown RBP2.33□□□□□ -2.04
RPN9YDR427W RPS3P05750 240 aaKnown RBP2.32□□□□□ -2.04
RPN9YDR427W POP8P38208 133 aa2.32□□□□□ -2.04
RPN9YDR427W ATG12P38316 186 aa2.32□□□□□ -2.04
RPN9YDR427W COG7P53195 279 aa2.32□□□□□ -2.04
RPN9YDR427W PEX31P53203 462 aa2.32□□□□□ -2.04
RPN9YDR427W FCF1Q05498 189 aaPredicted RBP2.32□□□□□ -2.04
RPN9YDR427W SFH1Q06168 426 aa2.32□□□□□ -2.04
RPN9YDR427W RRP36Q12481 300 aaPredicted RBP2.32□□□□□ -2.04
RPN9YDR427W RPP0P05317 312 aaKnown RBP2.31□□□□□ -2.04
RPN9YDR427W POF1P25576 258 aa2.31□□□□□ -2.04
RPN9YDR427W CAT2P32796 670 aaKnown RBP2.31□□□□□ -2.04
RPN9YDR427W RIB7P33312 244 aa2.31□□□□□ -2.04
RPN9YDR427W SDC1Q03323 175 aa2.31□□□□□ -2.04
RPN9YDR427W GMC2Q06201 188 aa2.31□□□□□ -2.04
RPN9YDR427W ARV1Q06541 321 aa2.31□□□□□ -2.04
RPN9YDR427W YAL064W-BO13512 126 aa2.3□□□□□ -2.04
RPN9YDR427W ERG2P32352 222 aa2.3□□□□□ -2.04
RPN9YDR427W PHO89P38361 574 aa2.3□□□□□ -2.04
RPN9YDR427W YHI9P38765 294 aa2.3□□□□□ -2.04
RPN9YDR427W PET100P38958 111 aa2.3□□□□□ -2.04
RPN9YDR427W RCY1P39531 840 aa2.3□□□□□ -2.04
RPN9YDR427W PIR5P46999 287 aa2.3□□□□□ -2.04
RPN9YDR427W KAP114P53067 1004 aa2.3□□□□□ -2.04
RPN9YDR427W SYF2P53277 215 aaPredicted RBP2.3□□□□□ -2.04
RPN9YDR427W FMP41P53889 259 aaKnown RBP2.3□□□□□ -2.04
RPN9YDR427W SEC10Q06245 871 aa2.3□□□□□ -2.04
RPN9YDR427W AGC1Q12482 902 aa2.3□□□□□ -2.04
RPN9YDR427W YBL112CQ3E7Y4 105 aa2.3□□□□□ -2.04
RPN9YDR427W PEX3P28795 441 aa2.29□□□□□ -2.04
RPN9YDR427W MRPL37P36532 105 aa2.29□□□□□ -2.04
RPN9YDR427W HSM3P38348 480 aa2.29□□□□□ -2.04
RPN9YDR427W MED6P38782 295 aa2.29□□□□□ -2.04
RPN9YDR427W NPT1P39683 429 aaKnown RBP2.29□□□□□ -2.04
RPN9YDR427W YER188WP40103 239 aa2.29□□□□□ -2.04
RPN9YDR427W SER33P40510 469 aa2.29□□□□□ -2.04
RPN9YDR427W RPE1P46969 238 aa2.29□□□□□ -2.04
RPN9YDR427W EMC2P47133 292 aaKnown RBP2.29□□□□□ -2.04
RPN9YDR427W MNT4P53745 580 aa2.29□□□□□ -2.04
RPN9YDR427W YPL039WQ03080 316 aa2.29□□□□□ -2.04
RPN9YDR427W CTS2Q06350 511 aa2.29□□□□□ -2.04
RPN9YDR427W YOS9Q99220 542 aa2.29□□□□□ -2.04
RPN9YDR427W PAN1P32521 1480 aa2.28□□□□□ -2.04
RPN9YDR427W SSK22P25390 1331 aaPredicted RBP2.28□□□□□ -2.04
RPN9YDR427W YMR316C-AI2HB70 103 aa2.28□□□□□ -2.04
RPN9YDR427W COS2P0CX12 379 aa2.28□□□□□ -2.04
RPN9YDR427W COS3P0CX13 379 aa2.28□□□□□ -2.04
RPN9YDR427W MET16P18408 261 aaPredicted RBP2.28□□□□□ -2.04
RPN9YDR427W TOM40P23644 387 aaKnown RBP2.28□□□□□ -2.04
RPN9YDR427W HMT1P38074 348 aa2.28□□□□□ -2.04
RPN9YDR427W COA1P40452 197 aa2.28□□□□□ -2.04
RPN9YDR427W NBP35P52920 328 aa2.28□□□□□ -2.04
RPN9YDR427W SWS2P53937 143 aa2.28□□□□□ -2.04
RPN9YDR427W RGM1Q00453 211 aa2.28□□□□□ -2.04
RPN9YDR427W PER33Q12144 273 aa2.28□□□□□ -2.04
RPN9YDR427W NOT5Q12514 560 aaPredicted RBP2.28□□□□□ -2.04
RPN9YDR427W ISD11Q6Q560 94 aa2.28□□□□□ -2.04
RPN9YDR427W COX2P00410 251 aa2.27□□□□□ -2.05
RPN9YDR427W RPL24AP04449 155 aaKnown RBP2.27□□□□□ -2.05
RPN9YDR427W CAM1P29547 415 aaKnown RBP2.27□□□□□ -2.05
RPN9YDR427W CSG2P35206 410 aa2.27□□□□□ -2.05
RPN9YDR427W TAD2P47058 250 aa2.27□□□□□ -2.05
RPN9YDR427W YJR141WP47172 347 aaPredicted RBP2.27□□□□□ -2.05
RPN9YDR427W CDD1Q06549 142 aa2.27□□□□□ -2.05
RPN9YDR427W AI5_BETAQ9ZZX0 354 aa2.27□□□□□ -2.05
RPN9YDR427W RPL26AP05743 127 aaKnown RBP2.26□□□□□ -2.05
RPN9YDR427W RPL4AP10664 362 aaKnown RBP2.26□□□□□ -2.05
RPN9YDR427W DPM1P14020 267 aaKnown RBP2.26□□□□□ -2.05
RPN9YDR427W RRT12P25381 491 aa2.26□□□□□ -2.05
RPN9YDR427W CLB6P32943 380 aa2.26□□□□□ -2.05
RPN9YDR427W COY1P34237 679 aa2.26□□□□□ -2.05
RPN9YDR427W ARN2P38724 620 aa2.26□□□□□ -2.05
RPN9YDR427W SHC1P39000 512 aa2.26□□□□□ -2.05
RPN9YDR427W PRM9P39551 298 aa2.26□□□□□ -2.05
RPN9YDR427W YAR1P46683 200 aa2.26□□□□□ -2.05
RPN9YDR427W RPL4BP49626 362 aaKnown RBP2.26□□□□□ -2.05
RPN9YDR427W TIM21P53220 239 aa2.26□□□□□ -2.05
RPN9YDR427W RPL26BP53221 127 aaKnown RBP2.26□□□□□ -2.05
RPN9YDR427W SSU72P53538 206 aaPredicted RBP2.26□□□□□ -2.05
RPN9YDR427W KAP95Q06142 861 aaKnown RBP2.26□□□□□ -2.05
RPN9YDR427W SME1Q12330 94 aaPredicted RBP2.26□□□□□ -2.05
RPN9YDR427W POL30P15873 258 aaKnown RBP2.25□□□□□ -2.05
RPN9YDR427W SNF6P18888 332 aa2.25□□□□□ -2.05
RPN9YDR427W DDI1P40087 428 aa2.25□□□□□ -2.05
RPN9YDR427W COX20Q04935 205 aa2.25□□□□□ -2.05
RPN9YDR427W CTR3Q06686 241 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms