RNA–Protein interactions for RNA: YCR067C

SED4, Transcript of Integral ER membrane protein that stimulates Sar1p GTPase activity, yeast

Gene SED4, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SED4	YCR067C	LUC7	Q07508	261 aa	Predicted RBP	4.55	□□□□□ -1.68
SED4	YCR067C	BDS1	Q08347	646 aa		4.55	□□□□□ -1.68
SED4	YCR067C	ATX2	Q12067	313 aa		4.55	□□□□□ -1.68
SED4	YCR067C	PRM4	Q12498	284 aa		4.55	□□□□□ -1.68
SED4	YCR067C	MATALPHA1	P0CY06	175 aa		4.55	□□□□□ -1.68
SED4	YCR067C	HMLALPHA1	P0CY07	175 aa		4.55	□□□□□ -1.68
SED4	YCR067C	FRS1	P15624	595 aa	Known RBP	4.55	□□□□□ -1.68
SED4	YCR067C	MCK1	P21965	375 aa	Known RBP	4.55	□□□□□ -1.68
SED4	YCR067C	RSC6	P25632	483 aa		4.55	□□□□□ -1.68
SED4	YCR067C	SNC2	P33328	115 aa		4.55	□□□□□ -1.68
SED4	YCR067C	MAL32	P38158	584 aa		4.55	□□□□□ -1.68
SED4	YCR067C	CCC1	P47818	322 aa		4.55	□□□□□ -1.68
SED4	YCR067C	RAD17	P48581	401 aa		4.55	□□□□□ -1.68
SED4	YCR067C	MAL12	P53341	584 aa		4.55	□□□□□ -1.68
SED4	YCR067C	ACT1	P60010	375 aa	Known RBP	4.55	□□□□□ -1.68
SED4	YCR067C	APM1	Q00776	475 aa	Predicted RBP	4.55	□□□□□ -1.68
SED4	YCR067C	YMR206W	Q03695	313 aa		4.55	□□□□□ -1.68
SED4	YCR067C	AIM7	Q12156	149 aa		4.55	□□□□□ -1.68
SED4	YCR067C	COA6	Q3E846	104 aa		4.55	□□□□□ -1.68
SED4	YCR067C	SOD2	P00447	233 aa		4.55	□□□□□ -1.68
SED4	YCR067C	PPH21	P23594	369 aa		4.55	□□□□□ -1.68
SED4	YCR067C	MRPL4	P36517	319 aa		4.55	□□□□□ -1.68
SED4	YCR067C	RPS20	P38701	121 aa	Known RBP	4.55	□□□□□ -1.68
SED4	YCR067C	GET2	P40056	285 aa		4.55	□□□□□ -1.68
SED4	YCR067C	PBP1	P53297	722 aa	Known RBP	4.55	□□□□□ -1.68
SED4	YCR067C	MSC1	Q03104	513 aa		4.55	□□□□□ -1.68
SED4	YCR067C	ROT1	Q03691	256 aa		4.55	□□□□□ -1.68
SED4	YCR067C	YDR415C	Q04033	374 aa	Predicted RBP	4.55	□□□□□ -1.68
SED4	YCR067C	TAZ1	Q06510	381 aa		4.55	□□□□□ -1.68
SED4	YCR067C	ADK1	P07170	222 aa	Known RBP	4.54	□□□□□ -1.68
SED4	YCR067C	ADH3	P07246	375 aa	Known RBP	4.54	□□□□□ -1.68
SED4	YCR067C	VMA16	P23968	213 aa		4.54	□□□□□ -1.68
SED4	YCR067C	DBF20	P32328	564 aa		4.54	□□□□□ -1.68
SED4	YCR067C	NTF2	P33331	125 aa	Known RBP	4.54	□□□□□ -1.68
SED4	YCR067C	KAE1	P36132	386 aa		4.54	□□□□□ -1.68
SED4	YCR067C	POA1	P38218	177 aa		4.54	□□□□□ -1.68
SED4	YCR067C	PHO90	P39535	881 aa		4.54	□□□□□ -1.68
SED4	YCR067C	EMC5	P40540	141 aa		4.54	□□□□□ -1.68
SED4	YCR067C	SLS1	P42900	643 aa		4.54	□□□□□ -1.68
SED4	YCR067C	MGA1	P53050	456 aa		4.54	□□□□□ -1.68
SED4	YCR067C	CYT2	Q00873	224 aa		4.54	□□□□□ -1.68
SED4	YCR067C	ISR1	Q06098	443 aa	Known RBP	4.54	□□□□□ -1.68
SED4	YCR067C	XYL2	Q07993	356 aa		4.54	□□□□□ -1.68
SED4	YCR067C	YDL177C	Q12257	170 aa		4.54	□□□□□ -1.68
SED4	YCR067C	MTF1	P14908	341 aa	Known RBP	4.54	□□□□□ -1.68
SED4	YCR067C	MOT2	P34909	587 aa	Known RBP	4.54	□□□□□ -1.68
SED4	YCR067C	SSS1	P35179	80 aa		4.54	□□□□□ -1.68
SED4	YCR067C	DCW1	P36091	449 aa		4.54	□□□□□ -1.68
SED4	YCR067C	MRPS9	P38120	278 aa		4.54	□□□□□ -1.68
SED4	YCR067C	BTT1	P40314	149 aa	Predicted RBP	4.54	□□□□□ -1.68
SED4	YCR067C	ACS2	P52910	683 aa	Known RBP	4.54	□□□□□ -1.68
SED4	YCR067C	YMR315W	Q04869	349 aa	Known RBP	4.54	□□□□□ -1.68
SED4	YCR067C	NMA1	Q06178	401 aa	Known RBP	4.54	□□□□□ -1.68
SED4	YCR067C	HEM25	Q07534	307 aa		4.54	□□□□□ -1.68
SED4	YCR067C	YOL073C	Q08232	322 aa		4.54	□□□□□ -1.68
SED4	YCR067C	STE7	P06784	515 aa		4.53	□□□□□ -1.68
SED4	YCR067C	MIR1	P23641	311 aa	Known RBP	4.53	□□□□□ -1.68
SED4	YCR067C	IDH2	P28241	369 aa	Known RBP	4.53	□□□□□ -1.68
SED4	YCR067C	MGM101	P32787	269 aa	Known RBP	4.53	□□□□□ -1.68
SED4	YCR067C	PPZ2	P33329	710 aa		4.53	□□□□□ -1.68
SED4	YCR067C	PUG1	P40100	303 aa		4.53	□□□□□ -1.68
SED4	YCR067C	RTS2	P40962	232 aa		4.53	□□□□□ -1.68
SED4	YCR067C	BUD8	P41698	603 aa		4.53	□□□□□ -1.68
SED4	YCR067C	TOS2	P50078	622 aa		4.53	□□□□□ -1.68
SED4	YCR067C	RSM27	P53305	110 aa		4.53	□□□□□ -1.68
SED4	YCR067C	ERP1	Q05359	219 aa	Known RBP	4.53	□□□□□ -1.68
SED4	YCR067C	HDA2	Q06629	674 aa		4.53	□□□□□ -1.68
SED4	YCR067C	REX4	Q08237	289 aa		4.53	□□□□□ -1.68
SED4	YCR067C	TPI1	P00942	248 aa	Known RBP	4.53	□□□□□ -1.68
SED4	YCR067C	AI1	P03875	834 aa		4.53	□□□□□ -1.68
SED4	YCR067C	BOS1	P25385	244 aa		4.53	□□□□□ -1.68
SED4	YCR067C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
SED4	YCR067C	ARC19	P33204	171 aa	Known RBP	4.53	□□□□□ -1.68
SED4	YCR067C	AFR1	P33304	620 aa		4.53	□□□□□ -1.68
SED4	YCR067C	MSN4	P33749	630 aa		4.53	□□□□□ -1.68
SED4	YCR067C	MIA40	P36046	403 aa		4.53	□□□□□ -1.68
SED4	YCR067C	SAF1	P38352	637 aa		4.53	□□□□□ -1.68
SED4	YCR067C	CHS7	P38843	316 aa		4.53	□□□□□ -1.68
SED4	YCR067C	APQ12	P40532	138 aa		4.53	□□□□□ -1.68
SED4	YCR067C	MNT3	P40549	630 aa		4.53	□□□□□ -1.68
SED4	YCR067C	UBX6	P47049	396 aa		4.53	□□□□□ -1.68
SED4	YCR067C	BNS1	P50084	137 aa		4.53	□□□□□ -1.68
SED4	YCR067C	ERV25	P54837	211 aa	Known RBP	4.53	□□□□□ -1.68
SED4	YCR067C	AVO2	Q04749	426 aa		4.53	□□□□□ -1.68
SED4	YCR067C	YPR109W	Q06104	294 aa		4.53	□□□□□ -1.68
SED4	YCR067C	YJR112W-A	Q3E743	109 aa		4.53	□□□□□ -1.68
SED4	YCR067C	SRN2	Q99176	213 aa		4.53	□□□□□ -1.68
SED4	YCR067C	RPL31A	P0C2H8	113 aa	Known RBP	4.53	□□□□□ -1.68
SED4	YCR067C	RPL31B	P0C2H9	113 aa	Known RBP	4.53	□□□□□ -1.68
SED4	YCR067C	HNM1	P19807	563 aa		4.53	□□□□□ -1.68
SED4	YCR067C	VPS52	P39904	641 aa		4.53	□□□□□ -1.68
SED4	YCR067C	HEM14	P40012	539 aa		4.53	□□□□□ -1.68
SED4	YCR067C	YIL161W	P40449	235 aa	Known RBP	4.53	□□□□□ -1.68
SED4	YCR067C	YIL089W	P40500	205 aa		4.53	□□□□□ -1.68
SED4	YCR067C	AVT7	P40501	490 aa		4.53	□□□□□ -1.68
SED4	YCR067C	PIN3	Q06449	215 aa		4.53	□□□□□ -1.68
SED4	YCR067C	BRX1	Q08235	291 aa	Known RBP	4.53	□□□□□ -1.68
SED4	YCR067C	YPQ1	Q12010	308 aa		4.53	□□□□□ -1.68
SED4	YCR067C	FUR4	P05316	633 aa	Known RBP	4.52	□□□□□ -1.69
SED4	YCR067C	MET3	P08536	511 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms