RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 ZNF623O75123 536 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 FGFR1OPO95684 399 aaKnown RBP13.45□□□□□ -0.26
LINC00339-213ENST00000642137 NR3C1P04150 777 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 SKIP12755 728 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 MATR3P43243 847 aaKnown RBP eCLIP13.45□□□□□ -0.26
LINC00339-213ENST00000642137 FAM189BP81408 668 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 POU5F1Q01860 360 aaKnown RBP13.45□□□□□ -0.26
LINC00339-213ENST00000642137 HSP90AA2PQ14568 343 aaPredicted RBP13.45□□□□□ -0.26
LINC00339-213ENST00000642137 ZNF568Q3ZCX4 644 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 UBXN11Q5T124 520 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 SPATA1Q5VX52 437 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 TWF2Q6IBS0 349 aaKnown RBP13.45□□□□□ -0.26
LINC00339-213ENST00000642137 FILIP1Q7Z7B0 1213 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 ZBTB33Q86T24 672 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 CDR2LQ86X02 465 aaPredicted RBP13.45□□□□□ -0.26
LINC00339-213ENST00000642137 FBXL18Q96ME1 805 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 CEP63Q96MT8 703 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 ADAM2Q99965 735 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 CBWD1Q9BRT8 395 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 MSTO1Q9BUK6 570 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 CDT1Q9H211 546 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 TSPYL2Q9H2G4 693 aaPredicted RBP13.45□□□□□ -0.26
LINC00339-213ENST00000642137 PCIF1Q9H4Z3 704 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 KIAA1586Q9HCI6 787 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 C1orf112Q9NSG2 853 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 HSPBP1Q9NZL4 362 aa13.45□□□□□ -0.26
LINC00339-213ENST00000642137 AGO2Q9UKV8 859 aaKnown RBP13.45□□□□□ -0.26
LINC00339-213ENST00000642137 A0A0U1RQF3 1178 aa13.44□□□□□ -0.26
LINC00339-213ENST00000642137 ABHD14A-ACY1A0A1B0GW23 586 aa13.44□□□□□ -0.26
LINC00339-213ENST00000642137 IKBKBO14920 756 aa13.44□□□□□ -0.26
LINC00339-213ENST00000642137 MAPK13O15264 365 aa13.44□□□□□ -0.26
LINC00339-213ENST00000642137 NPTXRO95502 500 aa13.44□□□□□ -0.26
LINC00339-213ENST00000642137 SYN1P17600 705 aa13.44□□□□□ -0.26
LINC00339-213ENST00000642137 NR2F2P24468 414 aa13.44□□□□□ -0.26
LINC00339-213ENST00000642137 RAB27AP51159 221 aa13.44□□□□□ -0.26
LINC00339-213ENST00000642137 FPGSQ05932 587 aa13.44□□□□□ -0.26
LINC00339-213ENST00000642137 IKBKEQ14164 716 aa13.44□□□□□ -0.26
LINC00339-213ENST00000642137 NOLC1Q14978 699 aaKnown RBP eCLIP13.44□□□□□ -0.26
LINC00339-213ENST00000642137 TPD52L1Q16890 204 aaPredicted RBP13.44□□□□□ -0.26
LINC00339-213ENST00000642137 SLC24A5Q71RS6 500 aa13.44□□□□□ -0.26
LINC00339-213ENST00000642137 MRPL10Q7Z7H8 261 aaKnown RBP13.44□□□□□ -0.26
LINC00339-213ENST00000642137 GPD1LQ8N335 351 aa13.44□□□□□ -0.26
LINC00339-213ENST00000642137 CSGALNACT2Q8N6G5 542 aa13.44□□□□□ -0.26
LINC00339-213ENST00000642137 XXYLT1Q8NBI6 393 aa13.44□□□□□ -0.26
LINC00339-213ENST00000642137 NOC3LQ8WTT2 800 aaKnown RBP13.44□□□□□ -0.26
LINC00339-213ENST00000642137 SRRTQ9BXP5 876 aaKnown RBP13.44□□□□□ -0.26
LINC00339-213ENST00000642137 EIF2AQ9BY44 585 aaKnown RBP13.44□□□□□ -0.26
LINC00339-213ENST00000642137 FAM105AQ9NUU6 356 aa13.44□□□□□ -0.26
LINC00339-213ENST00000642137 ANKFY1Q9P2R3 1169 aa13.44□□□□□ -0.26
LINC00339-213ENST00000642137 C9IYK1 514 aa13.43□□□□□ -0.26
LINC00339-213ENST00000642137 EXTL3O43909 919 aa13.43□□□□□ -0.26
LINC00339-213ENST00000642137 EXOC3O60645 756 aa13.43□□□□□ -0.26
LINC00339-213ENST00000642137 EFCAB14O75071 495 aa13.43□□□□□ -0.26
LINC00339-213ENST00000642137 EOMESO95936 686 aa13.43□□□□□ -0.26
LINC00339-213ENST00000642137 FGBP02675 491 aa13.43□□□□□ -0.26
LINC00339-213ENST00000642137 ACTN1P12814 892 aa13.43□□□□□ -0.26
LINC00339-213ENST00000642137 GRM5P41594 1212 aa13.43□□□□□ -0.26
LINC00339-213ENST00000642137 MYL5Q02045 173 aa13.43□□□□□ -0.26
LINC00339-213ENST00000642137 IQCB1Q15051 598 aa13.43□□□□□ -0.26
LINC00339-213ENST00000642137 TCTN1Q2MV58 587 aa13.43□□□□□ -0.26
LINC00339-213ENST00000642137 THNSL1Q8IYQ7 743 aa13.43□□□□□ -0.26
LINC00339-213ENST00000642137 FAM200AQ8TCP9 573 aa13.43□□□□□ -0.26
LINC00339-213ENST00000642137 LBHD1Q9BQE6 289 aaPredicted RBP13.43□□□□□ -0.26
LINC00339-213ENST00000642137 MKNK1Q9BUB5 465 aa13.43□□□□□ -0.26
LINC00339-213ENST00000642137 TRIM6Q9C030 488 aaPredicted RBP13.43□□□□□ -0.26
LINC00339-213ENST00000642137 ELAC1Q9H777 363 aaKnown RBP13.43□□□□□ -0.26
LINC00339-213ENST00000642137 CBX8Q9HC52 389 aa13.43□□□□□ -0.26
LINC00339-213ENST00000642137 RNF216Q9NWF9 866 aaPredicted RBP13.43□□□□□ -0.26
LINC00339-213ENST00000642137 CPSF3Q9UKF6 684 aaKnown RBP13.43□□□□□ -0.26
LINC00339-213ENST00000642137 ZMYND8Q9ULU4 1186 aaPredicted RBP13.43□□□□□ -0.26
LINC00339-213ENST00000642137 FRMD4BQ9Y2L6 1034 aa13.43□□□□□ -0.26
LINC00339-213ENST00000642137 PCDHB2Q9Y5E7 798 aa13.43□□□□□ -0.26
LINC00339-213ENST00000642137 LTBP2Q14767 1821 aa13.42□□□□□ -0.26
LINC00339-213ENST00000642137 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.42□□□□□ -0.26
LINC00339-213ENST00000642137 ZNF233A6NK53 670 aa13.42□□□□□ -0.26
LINC00339-213ENST00000642137 BECN2A8MW95 431 aa13.42□□□□□ -0.26
LINC00339-213ENST00000642137 FAM189A1O60320 539 aa13.42□□□□□ -0.26
LINC00339-213ENST00000642137 BAIAP3O94812 1187 aa13.42□□□□□ -0.26
LINC00339-213ENST00000642137 GNA14O95837 355 aa13.42□□□□□ -0.26
LINC00339-213ENST00000642137 CLTAP09496 248 aa13.42□□□□□ -0.26
LINC00339-213ENST00000642137 STAG3L1P0CL83 205 aa13.42□□□□□ -0.26
LINC00339-213ENST00000642137 ACRP10323 421 aa13.42□□□□□ -0.26
LINC00339-213ENST00000642137 PSMC2P35998 433 aaKnown RBP13.42□□□□□ -0.26
LINC00339-213ENST00000642137 CYP2J2P51589 502 aa13.42□□□□□ -0.26
LINC00339-213ENST00000642137 MCCD1P59942 119 aaPredicted RBP13.42□□□□□ -0.26
LINC00339-213ENST00000642137 NCAPHQ15003 741 aa13.42□□□□□ -0.26
LINC00339-213ENST00000642137 CRELD2Q6UXH1 353 aaPredicted RBP13.42□□□□□ -0.26
LINC00339-213ENST00000642137 LRRC55Q6ZSA7 311 aa13.42□□□□□ -0.26
LINC00339-213ENST00000642137 C16orf59Q7L2K0 433 aa13.42□□□□□ -0.26
LINC00339-213ENST00000642137 DHX40Q8IX18 779 aaKnown RBP13.42□□□□□ -0.26
LINC00339-213ENST00000642137 HACE1Q8IYU2 909 aa13.42□□□□□ -0.26
LINC00339-213ENST00000642137 SMG8Q8ND04 991 aaKnown RBP13.42□□□□□ -0.26
LINC00339-213ENST00000642137 LINC01599Q8WXQ3 324 aa13.42□□□□□ -0.26
LINC00339-213ENST00000642137 PGBD4Q96DM1 585 aa13.42□□□□□ -0.26
LINC00339-213ENST00000642137 SAAL1Q96ER3 474 aa13.42□□□□□ -0.26
LINC00339-213ENST00000642137 ACAP3Q96P50 834 aa13.42□□□□□ -0.26
LINC00339-213ENST00000642137 CCDC94Q9BW85 323 aaPredicted RBP13.42□□□□□ -0.26
LINC00339-213ENST00000642137 THAP9Q9H5L6 903 aa13.42□□□□□ -0.26
LINC00339-213ENST00000642137 IPPQ9Y573 584 aa13.42□□□□□ -0.26
LINC00339-213ENST00000642137 GOLGA8IPA6NC78 632 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms