RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 MXRA8Q9BRK3 442 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 GPRC5CQ9NQ84 441 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 COL20A1Q9P218 1284 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 CNOT7Q9UIV1 285 aaKnown RBP14.86□□□□□ -0.03
PHGDH-233ENST00000642021 ZBTB21Q9ULJ3 1066 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 CALCAP01258 141 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 ADRB2P07550 413 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 MAP2K1Q02750 393 aaPredicted RBP14.86□□□□□ -0.03
PHGDH-233ENST00000642021 SPP2Q13103 211 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 AOC3Q16853 763 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 LDHDQ86WU2 507 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 XXYLT1Q8NBI6 393 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 NUP85Q9BW27 656 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 GLIS2Q9BZE0 524 aaPredicted RBP14.86□□□□□ -0.03
PHGDH-233ENST00000642021 KCNH7Q9NS40 1196 aa14.86□□□□□ -0.03
PHGDH-233ENST00000642021 LARSQ9P2J5 1176 aaKnown RBP14.86□□□□□ -0.03
PHGDH-233ENST00000642021 MYH11P35749 1972 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 DHX15O43143 795 aaKnown RBP14.85□□□□□ -0.03
PHGDH-233ENST00000642021 MMP10P09238 476 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 PDE6BP35913 854 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 RARRES1P49788 294 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 FKBP1AP62942 108 aaKnown RBP14.85□□□□□ -0.03
PHGDH-233ENST00000642021 CETN1Q12798 172 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 AUHQ13825 339 aaKnown RBP14.85□□□□□ -0.03
PHGDH-233ENST00000642021 SEL1L2Q5TEA6 688 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 MIER3Q7Z3K6 550 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 PIGWQ7Z7B1 504 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 CDAN1Q8IWY9 1227 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 NLGN1Q8N2Q7 840 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 ZNF564Q8TBZ8 553 aaPredicted RBP14.85□□□□□ -0.03
PHGDH-233ENST00000642021 ART4Q93070 314 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 MYCBPQ99417 103 aaPredicted RBP14.85□□□□□ -0.03
PHGDH-233ENST00000642021 TMEM206Q9H813 350 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 ARHGEF10LQ9HCE6 1279 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 MRPL11Q9Y3B7 192 aaKnown RBP14.85□□□□□ -0.03
PHGDH-233ENST00000642021 RBBP6Q7Z6E9 1792 aaKnown RBP14.85□□□□□ -0.03
PHGDH-233ENST00000642021 CLRN2A0PK11 232 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 SPOPO43791 374 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 CREB1P16220 341 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 HSPA6P17066 643 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 IFNAR2P48551 515 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 MXI1P50539 228 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 RASA3Q14644 834 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 CLUL1Q15846 466 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 CYP1B1Q16678 543 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 TNFAIP8L3Q5GJ75 292 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 C6orf118Q5T5N4 469 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 HAUS6Q7Z4H7 955 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 CCDC25Q86WR0 208 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 CBWD2Q8IUF1 395 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 CCDC197Q8NCU1 140 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 AGBL1Q96MI9 1066 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 ACCSQ96QU6 501 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 DDX23Q9BUQ8 820 aaKnown RBP14.85□□□□□ -0.03
PHGDH-233ENST00000642021 WNT8AQ9H1J5 351 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 INTS9Q9NV88 658 aaKnown RBP14.85□□□□□ -0.03
PHGDH-233ENST00000642021 CCT8L1PA6NM43 557 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 FOXO6A8MYZ6 492 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 CHUKO15111 745 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 P4HA2O15460 535 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 PPIP5K2O43314 1243 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 MTA2O94776 668 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 GZMAP12544 262 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 RARGP13631 454 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 GSCP56915 257 aaPredicted RBP14.85□□□□□ -0.03
PHGDH-233ENST00000642021 C1orf54Q8WWF1 131 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 CCDC127Q96BQ5 260 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 RIT2Q99578 217 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 ELAC2Q9BQ52 826 aaKnown RBP14.85□□□□□ -0.03
PHGDH-233ENST00000642021 KDM4CQ9H3R0 1056 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 AAASQ9NRG9 546 aa14.85□□□□□ -0.03
PHGDH-233ENST00000642021 MTRF1LQ9UGC7 380 aaKnown RBP14.85□□□□□ -0.03
PHGDH-233ENST00000642021 RASGRF2O14827 1237 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 SLC16A4O15374 487 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 CLDN3O15551 220 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 AGTP01019 485 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 PLS3P13797 630 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 ADSSP30520 456 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 CDR1P51861 262 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 SETQ01105 290 aaPredicted RBP14.84□□□□□ -0.03
PHGDH-233ENST00000642021 CC2D2BQ6DHV5 1058 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 EXOC3L1Q86VI1 746 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 PARP9Q8IXQ6 854 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 NCAPGQ9BPX3 1015 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 CCDC113Q9H0I3 377 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 CYP1A2P05177 515 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 P4HBP07237 508 aaKnown RBP14.84□□□□□ -0.03
PHGDH-233ENST00000642021 ADCY2Q08462 1091 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 XRCC4Q13426 336 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 LONRF1Q17RB8 773 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 NBPF9Q3BBW0 867 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 ZNF568Q3ZCX4 644 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 MSL1Q68DK7 614 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 C12orf56Q8IXR9 622 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 DHX38Q92620 1227 aaKnown RBP14.84□□□□□ -0.03
PHGDH-233ENST00000642021 ZNF653Q96CK0 615 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 SAAL1Q96ER3 474 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 SGSM3Q96HU1 749 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 FAM84AQ96KN4 292 aa14.84□□□□□ -0.03
PHGDH-233ENST00000642021 TMEM109Q9BVC6 243 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms