RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 IFNLR1Q8IU57 520 aaPredicted RBP19.12■□□□□ 0.65
PHGDH-232ENST00000641947 ACRBPQ8NEB7 543 aa19.12■□□□□ 0.65
PHGDH-232ENST00000641947 ZNF397Q8NF99 534 aaPredicted RBP19.12■□□□□ 0.65
PHGDH-232ENST00000641947 C16orf45Q96MC5 204 aaPredicted RBP19.12■□□□□ 0.65
PHGDH-232ENST00000641947 INO80BQ9C086 356 aaPredicted RBP19.12■□□□□ 0.65
PHGDH-232ENST00000641947 INTS2Q9H0H0 1204 aaKnown RBP19.12■□□□□ 0.65
PHGDH-232ENST00000641947 UPF3AQ9H1J1 476 aaKnown RBP19.12■□□□□ 0.65
PHGDH-232ENST00000641947 ADGRG1Q9Y653 693 aa19.12■□□□□ 0.65
PHGDH-232ENST00000641947 NRCAMQ92823 1304 aa19.12■□□□□ 0.65
PHGDH-232ENST00000641947 GPR25O00155 361 aa19.11■□□□□ 0.65
PHGDH-232ENST00000641947 ACKR2O00590 384 aa19.11■□□□□ 0.65
PHGDH-232ENST00000641947 HARSP12081 509 aaKnown RBP19.11■□□□□ 0.65
PHGDH-232ENST00000641947 PRKAR2AP13861 404 aaKnown RBP19.11■□□□□ 0.65
PHGDH-232ENST00000641947 PROZP22891 400 aa19.11■□□□□ 0.65
PHGDH-232ENST00000641947 GPC3P51654 580 aa19.11■□□□□ 0.65
PHGDH-232ENST00000641947 ZNF200P98182 395 aaPredicted RBP19.11■□□□□ 0.65
PHGDH-232ENST00000641947 EPC2Q52LR7 807 aa19.11■□□□□ 0.65
PHGDH-232ENST00000641947 EEF1DP3Q658K8 133 aa19.11■□□□□ 0.65
PHGDH-232ENST00000641947 SLFN12LQ6IEE8 588 aa19.11■□□□□ 0.65
PHGDH-232ENST00000641947 NYAP1Q6ZVC0 841 aa19.11■□□□□ 0.65
PHGDH-232ENST00000641947 CDR2LQ86X02 465 aaPredicted RBP19.11■□□□□ 0.65
PHGDH-232ENST00000641947 PTPRHQ9HD43 1115 aa19.11■□□□□ 0.65
PHGDH-232ENST00000641947 ARHGAP20Q9P2F6 1191 aa19.11■□□□□ 0.65
PHGDH-232ENST00000641947 PTPRJQ12913 1337 aa19.11■□□□□ 0.65
PHGDH-232ENST00000641947 RRN3P2A6NIE6 340 aa19.11■□□□□ 0.65
PHGDH-232ENST00000641947 TOM1L1O75674 476 aa19.11■□□□□ 0.65
PHGDH-232ENST00000641947 TMOD1P28289 359 aa19.11■□□□□ 0.65
PHGDH-232ENST00000641947 TNFSF9P41273 254 aa19.11■□□□□ 0.65
PHGDH-232ENST00000641947 POU5F1BQ06416 359 aa19.11■□□□□ 0.65
PHGDH-232ENST00000641947 HGSNATQ68CP4 663 aa19.11■□□□□ 0.65
PHGDH-232ENST00000641947 IQCEQ6IPM2 695 aa19.11■□□□□ 0.65
PHGDH-232ENST00000641947 ZBTB33Q86T24 672 aa19.11■□□□□ 0.65
PHGDH-232ENST00000641947 TMC2Q8TDI7 906 aa19.11■□□□□ 0.65
PHGDH-232ENST00000641947 REXO2Q9Y3B8 237 aaKnown RBP19.11■□□□□ 0.65
PHGDH-232ENST00000641947 TRIP11Q15643 1979 aa19.11■□□□□ 0.65
PHGDH-232ENST00000641947 ZNF233A6NK53 670 aa19.1■□□□□ 0.65
PHGDH-232ENST00000641947 ADAMTS4O75173 837 aa19.1■□□□□ 0.65
PHGDH-232ENST00000641947 HOXC8P31273 242 aa19.1■□□□□ 0.65
PHGDH-232ENST00000641947 MATR3P43243 847 aaKnown RBP eCLIP19.1■□□□□ 0.65
PHGDH-232ENST00000641947 PHKA2P46019 1235 aa19.1■□□□□ 0.65
PHGDH-232ENST00000641947 CDK17Q00537 523 aa19.1■□□□□ 0.65
PHGDH-232ENST00000641947 TMEM62Q0P6H9 643 aa19.1■□□□□ 0.65
PHGDH-232ENST00000641947 TSHZ1Q6ZSZ6 1077 aa19.1■□□□□ 0.65
PHGDH-232ENST00000641947 ZNF516Q92618 1163 aa19.1■□□□□ 0.65
PHGDH-232ENST00000641947 FAM49AQ9H0Q0 323 aaPredicted RBP19.1■□□□□ 0.65
PHGDH-232ENST00000641947 HDAC6Q9UBN7 1215 aa19.1■□□□□ 0.65
PHGDH-232ENST00000641947 CLDN3O15551 220 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 TREHO43280 583 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 DLATP10515 647 aaKnown RBP19.09■□□□□ 0.65
PHGDH-232ENST00000641947 MXI1P50539 228 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 JAM2P57087 298 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 NKX3-2P78367 333 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 MAP2K1Q02750 393 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-232ENST00000641947 MCL1Q07820 350 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 PRPF4BQ13523 1007 aaKnown RBP19.09■□□□□ 0.65
PHGDH-232ENST00000641947 PSMD6Q15008 389 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 GNASQ5JWF2 1037 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 LMBRD2Q68DH5 695 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-232ENST00000641947 SEMA4DQ92854 862 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 MAP7D2Q96T17 732 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 ADAMTS10Q9H324 1103 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 NHEJ1Q9H9Q4 299 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-232ENST00000641947 FBXL5Q9UKA1 691 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 CITO14578 2027 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 KIAA0391O15091 583 aaKnown RBP19.09■□□□□ 0.65
PHGDH-232ENST00000641947 PMM2O15305 246 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 NDUFA10O95299 355 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 PNMA6AP0CW24 399 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-232ENST00000641947 FAM187BQ17R55 369 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 MAP3K21Q5TCX8 1036 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 ATF7IP2Q5U623 682 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 PHLDB3Q6NSJ2 640 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 CXCL17Q6UXB2 119 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 EHBP1Q8NDI1 1231 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 NLRP7Q8WX94 980 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 GPR88Q9GZN0 384 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 CDHR5Q9HBB8 845 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 KIAA1586Q9HCI6 787 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 PDE11AQ9HCR9 933 aa19.09■□□□□ 0.65
PHGDH-232ENST00000641947 PRMT7Q9NVM4 692 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-232ENST00000641947 RBAKQ9NYW8 714 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-232ENST00000641947 CNTNAP2Q9UHC6 1331 aa19.08■□□□□ 0.65
PHGDH-232ENST00000641947 TULP1O00294 542 aaPredicted RBP19.08■□□□□ 0.64
PHGDH-232ENST00000641947 P4HA2O15460 535 aa19.08■□□□□ 0.64
PHGDH-232ENST00000641947 N4BP1O75113 896 aaKnown RBP19.08■□□□□ 0.64
PHGDH-232ENST00000641947 GPR32O75388 356 aa19.08■□□□□ 0.64
PHGDH-232ENST00000641947 RARBP10826 455 aa19.08■□□□□ 0.64
PHGDH-232ENST00000641947 CYP2C9P11712 490 aa19.08■□□□□ 0.64
PHGDH-232ENST00000641947 CLDN10P78369 228 aa19.08■□□□□ 0.64
PHGDH-232ENST00000641947 RAPGEF1Q13905 1077 aa19.08■□□□□ 0.64
PHGDH-232ENST00000641947 KIZQ2M2Z5 673 aa19.08■□□□□ 0.64
PHGDH-232ENST00000641947 TSR1Q2NL82 804 aaKnown RBP19.08■□□□□ 0.64
PHGDH-232ENST00000641947 MPZL3Q6UWV2 235 aa19.08■□□□□ 0.64
PHGDH-232ENST00000641947 ARHGEF19Q8IW93 802 aa19.08■□□□□ 0.64
PHGDH-232ENST00000641947 CEP120Q8N960 986 aa19.08■□□□□ 0.64
PHGDH-232ENST00000641947 ZNF296Q8WUU4 475 aaPredicted RBP19.08■□□□□ 0.64
PHGDH-232ENST00000641947 TMEM8AQ9HCN3 771 aa19.08■□□□□ 0.64
PHGDH-232ENST00000641947 ZNHIT6Q9NWK9 470 aaKnown RBP19.08■□□□□ 0.64
PHGDH-232ENST00000641947 EPN1Q9Y6I3 576 aaPredicted RBP19.08■□□□□ 0.64
PHGDH-232ENST00000641947 SMIM35A0A1B0GVV1 85 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms