RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 PPP2R5CQ13362 524 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 ORC2Q13416 577 aaPredicted RBP8.26□□□□□ -1.09
PHGDH-225ENST00000641720 DRP2Q13474 957 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 IL17AQ16552 155 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 UGCGQ16739 394 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 ZNF484Q5JVG2 852 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 ZNF746Q6NUN9 644 aaPredicted RBP8.26□□□□□ -1.09
PHGDH-225ENST00000641720 SLC44A3Q8N4M1 653 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 ZBTB44Q8NCP5 570 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 GPR152Q8TDT2 470 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 FAM20AQ96MK3 541 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 KLHL5Q96PQ7 755 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 ZSCAN16Q9H4T2 348 aaPredicted RBP8.26□□□□□ -1.09
PHGDH-225ENST00000641720 WDR6Q9NNW5 1121 aaKnown RBP8.26□□□□□ -1.09
PHGDH-225ENST00000641720 PARD6AQ9NPB6 346 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 SLC2A4RGQ9NR83 387 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 TBC1D22BQ9NU19 505 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 TBC1D13Q9NVG8 400 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 MARCH5Q9NX47 278 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 GINS2Q9Y248 185 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 IGSF10Q6WRI0 2623 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 OBSL1O75147 1896 aa8.26□□□□□ -1.09
PHGDH-225ENST00000641720 CITO14578 2027 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 TNRC6BQ9UPQ9 1833 aaKnown RBP8.25□□□□□ -1.09
PHGDH-225ENST00000641720 PP2D1A8MPX8 630 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 WDR64B1ANS9 1081 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 HOXA2O43364 376 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 STBD1O95210 358 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 ADRB1P08588 477 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 TDGF1P13385 188 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 DARSP14868 501 aaKnown RBP8.25□□□□□ -1.09
PHGDH-225ENST00000641720 FGFR4P22455 802 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 EIF4BP23588 611 aaKnown RBP8.25□□□□□ -1.09
PHGDH-225ENST00000641720 TXKP42681 527 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 PHKA2P46019 1235 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 SLC11A1P49279 550 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 STARD6P59095 220 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 CEBPZQ03701 1054 aaKnown RBP8.25□□□□□ -1.09
PHGDH-225ENST00000641720 KRT17Q04695 432 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 HTR4Q13639 388 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 PTPAQ15257 358 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 SF3A1Q15459 793 aaKnown RBP8.25□□□□□ -1.09
PHGDH-225ENST00000641720 TARBP2Q15633 366 aaKnown RBP8.25□□□□□ -1.09
PHGDH-225ENST00000641720 NCAPH2Q6IBW4 605 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 POTEHQ6S545 545 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 OTOP3Q7RTS5 596 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 C1orf210Q8IVY1 113 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 ZNF687Q8N1G0 1237 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 PJA1Q8NG27 643 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 FOXQ1Q9C009 403 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 AZI2Q9H6S1 392 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 TTC12Q9H892 705 aaPredicted RBP8.25□□□□□ -1.09
PHGDH-225ENST00000641720 CLUHO75153 1309 aa8.25□□□□□ -1.09
PHGDH-225ENST00000641720 ASCC3Q8N3C0 2202 aaKnown RBP8.24□□□□□ -1.09
PHGDH-225ENST00000641720 DDHD2O94830 711 aa8.24□□□□□ -1.09
PHGDH-225ENST00000641720 BAG4O95429 457 aaKnown RBP8.24□□□□□ -1.09
PHGDH-225ENST00000641720 ATXN8OSP0DMR3 200 aa8.24□□□□□ -1.09
PHGDH-225ENST00000641720 PRPHP41219 470 aa8.24□□□□□ -1.09
PHGDH-225ENST00000641720 NASPP49321 788 aaPredicted RBP8.24□□□□□ -1.09
PHGDH-225ENST00000641720 JAK3P52333 1124 aa8.24□□□□□ -1.09
PHGDH-225ENST00000641720 NLRP11P59045 1033 aaKnown RBP8.24□□□□□ -1.09
PHGDH-225ENST00000641720 DNM1Q05193 864 aaKnown RBP8.24□□□□□ -1.09
PHGDH-225ENST00000641720 GRIN1Q05586 938 aa8.24□□□□□ -1.09
PHGDH-225ENST00000641720 FZD5Q13467 585 aa8.24□□□□□ -1.09
PHGDH-225ENST00000641720 ZNF528Q3MIS6 628 aa8.24□□□□□ -1.09
PHGDH-225ENST00000641720 ODR4Q5SWX8 454 aa8.24□□□□□ -1.09
PHGDH-225ENST00000641720 MIER3Q7Z3K6 550 aa8.24□□□□□ -1.09
PHGDH-225ENST00000641720 ZNF280BQ86YH2 543 aa8.24□□□□□ -1.09
PHGDH-225ENST00000641720 SMAP1Q8IYB5 467 aaPredicted RBP8.24□□□□□ -1.09
PHGDH-225ENST00000641720 SLFN12Q8IYM2 578 aa8.24□□□□□ -1.09
PHGDH-225ENST00000641720 LRRC71Q8N4P6 559 aa8.24□□□□□ -1.09
PHGDH-225ENST00000641720 LPPQ93052 612 aa8.24□□□□□ -1.09
PHGDH-225ENST00000641720 TMEM169Q96HH4 297 aa8.24□□□□□ -1.09
PHGDH-225ENST00000641720 ZNF668Q96K58 619 aaPredicted RBP8.24□□□□□ -1.09
PHGDH-225ENST00000641720 IPO9Q96P70 1041 aaKnown RBP8.24□□□□□ -1.09
PHGDH-225ENST00000641720 RPP25Q9BUL9 199 aaKnown RBP8.24□□□□□ -1.09
PHGDH-225ENST00000641720 ZNF302Q9NR11 478 aa8.24□□□□□ -1.09
PHGDH-225ENST00000641720 ARHGEF3Q9NR81 526 aa8.24□□□□□ -1.09
PHGDH-225ENST00000641720 DISC1Q9NRI5 854 aa8.24□□□□□ -1.09
PHGDH-225ENST00000641720 WRAP73Q9P2S5 460 aaPredicted RBP8.24□□□□□ -1.09
PHGDH-225ENST00000641720 TCEAL9Q9UHQ7 104 aa8.24□□□□□ -1.09
PHGDH-225ENST00000641720 CA14Q9ULX7 337 aa8.24□□□□□ -1.09
PHGDH-225ENST00000641720 PCNX2A6NKB5 2137 aa8.24□□□□□ -1.09
PHGDH-225ENST00000641720 PI4KAP42356 2102 aa8.24□□□□□ -1.09
PHGDH-225ENST00000641720 HELZ2Q9BYK8 2649 aaKnown RBP8.24□□□□□ -1.09
PHGDH-225ENST00000641720 BPTFQ12830 3046 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 IGKV6-21A0A0C4DH24 114 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 TMEM150BA6NC51 233 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 VWA3AA6NCI4 1184 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 BACH1O14867 736 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 INPPL1O15357 1258 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 MARCH6O60337 910 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 ZNF623O75123 536 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 ZC3H11AO75152 810 aaKnown RBP eCLIP8.23□□□□□ -1.09
PHGDH-225ENST00000641720 CSDE1O75534 798 aaKnown RBP8.23□□□□□ -1.09
PHGDH-225ENST00000641720 OFD1O75665 1012 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 RFPL2O75678 378 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 PSAPP07602 524 aa8.23□□□□□ -1.09
PHGDH-225ENST00000641720 PDIA4P13667 645 aaKnown RBP8.23□□□□□ -1.09
PHGDH-225ENST00000641720 MARCKSP29966 332 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms