RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	EGR3	Q06889	387 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	WDR75	Q8IWA0	830 aa	Known RBP	7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	NXPE1	Q8N323	547 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	TMEM52	Q8NDY8	209 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	CD99L2	Q8TCZ2	262 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	NSUN4	Q96CB9	384 aa	Known RBP	7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	IL17RA	Q96F46	866 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	ALG1	Q9BT22	464 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	DHX36	Q9H2U1	1008 aa	Known RBP	7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	HERC5	Q9UII4	1024 aa	Known RBP	7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	SLC45A1	Q9Y2W3	748 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	SNX11	Q9Y5W9	270 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	AK9	Q5TCS8	1911 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	ZNF891	A8MT65	544 aa	Predicted RBP	7.42	□□□□□ -1.22
CASC19-238	ENST00000641523		M0R2C6	588 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	PDHX	O00330	501 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	GSC2	O15499	205 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	KATNA1	O75449	491 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	PML	P29590	882 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	GNAL	P38405	381 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	MCAM	P43121	646 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	ID4	P47928	161 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	LACTB	P83111	547 aa	Predicted RBP	7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	EXOSC10	Q01780	885 aa	Known RBP	7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	KCNMA1	Q12791	1236 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	PAK1	Q13153	545 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	PICALM	Q13492	652 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	STAT4	Q14765	748 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	SLC9C1	Q4G0N8	1177 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	CCSAP	Q6IQ19	270 aa	Predicted RBP	7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	NAA16	Q6N069	864 aa	Predicted RBP	7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	KRBA2	Q6ZNG9	492 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	TMPRSS7	Q7RTY8	843 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	ZDHHC13	Q8IUH4	622 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	TEX11	Q8IYF3	940 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	PI4K2B	Q8TCG2	481 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	USP7	Q93009	1102 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	OSBPL5	Q9H0X9	879 aa	Predicted RBP	7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	IPPK	Q9H8X2	491 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	STK17A	Q9UEE5	414 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	FBXL7	Q9UJT9	491 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	DDX19B	Q9UMR2	479 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	TNN	Q9UQP3	1299 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	COMMD10	Q9Y6G5	202 aa		7.42	□□□□□ -1.22
CASC19-238	ENST00000641523	MYH2	Q9UKX2	1941 aa		7.41	□□□□□ -1.22
CASC19-238	ENST00000641523	TRBV23OR9-2	A0A075B6M9	112 aa		7.41	□□□□□ -1.22
CASC19-238	ENST00000641523	PRR19	A6NJB7	356 aa		7.41	□□□□□ -1.22
CASC19-238	ENST00000641523	NEMP1	O14524	444 aa		7.41	□□□□□ -1.22
CASC19-238	ENST00000641523	H2AFB1	P0C5Y9	115 aa		7.41	□□□□□ -1.22
CASC19-238	ENST00000641523	H2AFB2	P0C5Z0	115 aa		7.41	□□□□□ -1.22
CASC19-238	ENST00000641523	SCNN1B	P51168	640 aa		7.41	□□□□□ -1.22
CASC19-238	ENST00000641523	CEP85	Q6P2H3	762 aa		7.41	□□□□□ -1.22
CASC19-238	ENST00000641523	OR2W6P	Q8NHA6	318 aa		7.41	□□□□□ -1.22
CASC19-238	ENST00000641523	CHAMP1	Q96JM3	812 aa		7.41	□□□□□ -1.22
CASC19-238	ENST00000641523	NAP1L5	Q96NT1	182 aa	Predicted RBP	7.41	□□□□□ -1.22
CASC19-238	ENST00000641523	ERVK13-1	Q9NX77	482 aa		7.41	□□□□□ -1.22
CASC19-238	ENST00000641523	PI4KB	Q9UBF8	816 aa		7.41	□□□□□ -1.22
CASC19-238	ENST00000641523	ZHX2	Q9Y6X8	837 aa		7.41	□□□□□ -1.22
CASC19-238	ENST00000641523		A0A0G2JLL6	359 aa	Predicted RBP	7.4	□□□□□ -1.22
CASC19-238	ENST00000641523	C7orf72	A4D263	438 aa		7.4	□□□□□ -1.22
CASC19-238	ENST00000641523	DDTL	A6NHG4	134 aa	Predicted RBP	7.4	□□□□□ -1.22
CASC19-238	ENST00000641523	CBX4	O00257	560 aa		7.4	□□□□□ -1.22
CASC19-238	ENST00000641523	SOD2	P04179	222 aa		7.4	□□□□□ -1.22
CASC19-238	ENST00000641523	HLA-DOA	P06340	250 aa		7.4	□□□□□ -1.22
CASC19-238	ENST00000641523	BCL6	P41182	706 aa		7.4	□□□□□ -1.22
CASC19-238	ENST00000641523	DNM2	P50570	870 aa		7.4	□□□□□ -1.22
CASC19-238	ENST00000641523	MAP3K12	Q12852	859 aa		7.4	□□□□□ -1.22
CASC19-238	ENST00000641523	TTF1	Q15361	905 aa	Predicted RBP	7.4	□□□□□ -1.22
CASC19-238	ENST00000641523	CPSF6	Q16630	551 aa	Known RBP eCLIP	7.4	□□□□□ -1.22
CASC19-238	ENST00000641523	KIZ	Q2M2Z5	673 aa		7.4	□□□□□ -1.22
CASC19-238	ENST00000641523	PRRT2	Q7Z6L0	340 aa	Predicted RBP	7.4	□□□□□ -1.22
CASC19-238	ENST00000641523	ZFPM1	Q8IX07	1006 aa		7.4	□□□□□ -1.22
CASC19-238	ENST00000641523	RPAP2	Q8IXW5	612 aa	Predicted RBP	7.4	□□□□□ -1.22
CASC19-238	ENST00000641523	SMCR8	Q8TEV9	937 aa	Predicted RBP	7.4	□□□□□ -1.22
CASC19-238	ENST00000641523	SCYL1	Q96KG9	808 aa		7.4	□□□□□ -1.22
CASC19-238	ENST00000641523	MPHOSPH6	Q99547	160 aa	Known RBP	7.4	□□□□□ -1.22
CASC19-238	ENST00000641523	TTC1	Q99614	292 aa		7.4	□□□□□ -1.22
CASC19-238	ENST00000641523	AS3MT	Q9HBK9	375 aa		7.4	□□□□□ -1.22
CASC19-238	ENST00000641523	DDX4	Q9NQI0	724 aa	Known RBP	7.4	□□□□□ -1.22
CASC19-238	ENST00000641523	SLC5A4	Q9NY91	659 aa		7.4	□□□□□ -1.22
CASC19-238	ENST00000641523	DOCK2	Q92608	1830 aa		7.4	□□□□□ -1.23
CASC19-238	ENST00000641523	GPR39	O43194	453 aa		7.39	□□□□□ -1.23
CASC19-238	ENST00000641523	GDF11	O95390	407 aa		7.39	□□□□□ -1.23
CASC19-238	ENST00000641523	LDHA	P00338	332 aa	Known RBP	7.39	□□□□□ -1.23
CASC19-238	ENST00000641523	ASNS	P08243	561 aa		7.39	□□□□□ -1.23
CASC19-238	ENST00000641523	FOSL1	P15407	271 aa		7.39	□□□□□ -1.23
CASC19-238	ENST00000641523	BPI	P17213	487 aa		7.39	□□□□□ -1.23
CASC19-238	ENST00000641523	CAPN2	P17655	700 aa		7.39	□□□□□ -1.23
CASC19-238	ENST00000641523	ENDOU	P21128	410 aa	Known RBP	7.39	□□□□□ -1.23
CASC19-238	ENST00000641523	DHX8	Q14562	1220 aa	Known RBP	7.39	□□□□□ -1.23
CASC19-238	ENST00000641523	C17orf99	Q6UX52	265 aa		7.39	□□□□□ -1.23
CASC19-238	ENST00000641523	FOXP4	Q8IVH2	680 aa	Predicted RBP	7.39	□□□□□ -1.23
CASC19-238	ENST00000641523	CLASRP	Q8N2M8	674 aa	Known RBP	7.39	□□□□□ -1.23
CASC19-238	ENST00000641523	ZNF384	Q8TF68	577 aa		7.39	□□□□□ -1.23
CASC19-238	ENST00000641523	DPF3	Q92784	378 aa		7.39	□□□□□ -1.23
CASC19-238	ENST00000641523	SLC39A13	Q96H72	371 aa		7.39	□□□□□ -1.23
CASC19-238	ENST00000641523	ZNF333	Q96JL9	665 aa		7.39	□□□□□ -1.23
CASC19-238	ENST00000641523	ORAI3	Q9BRQ5	295 aa		7.39	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms