RNA–Protein interactions for RNA: ENST00000640460.1

PAX6-272, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-272ENST00000640460 TTLL13PA6NNM8 815 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 SLC16A4O15374 487 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 STAG3L1P0CL83 205 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 ZNF75DP51815 510 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 BTG3Q14201 252 aaPredicted RBP13.78□□□□□ -0.2
PAX6-272ENST00000640460 KCNB1Q14721 858 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 PCBP1Q15365 356 aaKnown RBP eCLIP13.78□□□□□ -0.2
PAX6-272ENST00000640460 FAM43BQ6ZT52 329 aaPredicted RBP13.78□□□□□ -0.2
PAX6-272ENST00000640460 TMEM161BQ8NDZ6 487 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 CLP1Q92989 425 aaKnown RBP13.78□□□□□ -0.2
PAX6-272ENST00000640460 SAMD11Q96NU1 681 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 FIZ1Q96SL8 496 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 CHST12Q9NRB3 414 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 PRMT7Q9NVM4 692 aaPredicted RBP13.78□□□□□ -0.2
PAX6-272ENST00000640460 LRFN2Q9ULH4 789 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 USP20Q9Y2K6 914 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 GDAQ9Y2T3 454 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 PCDHB7Q9Y5E2 793 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 FRMD3A2A2Y4 597 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 ERLIN2O94905 339 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 RHOBTB3O94955 611 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 ATP1A3P13637 1013 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 ZSCAN20P17040 1043 aaPredicted RBP13.78□□□□□ -0.2
PAX6-272ENST00000640460 ARF4P18085 180 aaPredicted RBP13.78□□□□□ -0.2
PAX6-272ENST00000640460 ERCC5P28715 1186 aaPredicted RBP13.78□□□□□ -0.2
PAX6-272ENST00000640460 EFNA5P52803 228 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 NCKAP1LP55160 1127 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 FAM189BP81408 668 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 AMPD3Q01432 767 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 MYL5Q02045 173 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 MAPK6Q16659 721 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 FAM187BQ17R55 369 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 PAN2Q504Q3 1202 aaKnown RBP13.78□□□□□ -0.2
PAX6-272ENST00000640460 ZNF658Q5TYW1 1059 aaPredicted RBP13.78□□□□□ -0.2
PAX6-272ENST00000640460 PPP4R3CPQ6ZMV5 832 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 TAS1R3Q7RTX0 852 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 CMTR2Q8IYT2 770 aaKnown RBP13.78□□□□□ -0.2
PAX6-272ENST00000640460 ENOX1Q8TC92 643 aaKnown RBP13.78□□□□□ -0.2
PAX6-272ENST00000640460 CPB2Q96IY4 423 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 LRRC27Q9C0I9 530 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 FANCLQ9NW38 375 aa13.78□□□□□ -0.2
PAX6-272ENST00000640460 MRPL42Q9Y6G3 142 aaKnown RBP13.78□□□□□ -0.2
PAX6-272ENST00000640460 H3BNC9 293 aa13.77□□□□□ -0.21
PAX6-272ENST00000640460 K7ERI5 159 aa13.77□□□□□ -0.21
PAX6-272ENST00000640460 ACKR2O00590 384 aa13.77□□□□□ -0.21
PAX6-272ENST00000640460 PRKCBP05771 671 aa13.77□□□□□ -0.21
PAX6-272ENST00000640460 IDEP14735 1019 aa13.77□□□□□ -0.21
PAX6-272ENST00000640460 SMTNP53814 917 aa13.77□□□□□ -0.21
PAX6-272ENST00000640460 CT47A1Q5JQC4 288 aaPredicted RBP13.77□□□□□ -0.21
PAX6-272ENST00000640460 TWF2Q6IBS0 349 aaKnown RBP13.77□□□□□ -0.21
PAX6-272ENST00000640460 CNNM4Q6P4Q7 775 aa13.77□□□□□ -0.21
PAX6-272ENST00000640460 SFR1Q86XK3 245 aa13.77□□□□□ -0.21
PAX6-272ENST00000640460 PRIMPOLQ96LW4 560 aa13.77□□□□□ -0.21
PAX6-272ENST00000640460 TRIM5Q9C035 493 aa13.77□□□□□ -0.21
PAX6-272ENST00000640460 TMEM134Q9H6X4 195 aa13.77□□□□□ -0.21
PAX6-272ENST00000640460 LMCD1Q9NZU5 365 aa13.77□□□□□ -0.21
PAX6-272ENST00000640460 KCNG1Q9UIX4 513 aa13.77□□□□□ -0.21
PAX6-272ENST00000640460 PHLPP2Q6ZVD8 1323 aa13.77□□□□□ -0.21
PAX6-272ENST00000640460 CNTNAP2Q9UHC6 1331 aa13.77□□□□□ -0.21
PAX6-272ENST00000640460 C5orf67F2Z3F1 127 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 MAPTP10636 758 aaKnown RBP13.76□□□□□ -0.21
PAX6-272ENST00000640460 NMT1P30419 496 aaKnown RBP13.76□□□□□ -0.21
PAX6-272ENST00000640460 CTNNB1P35222 781 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 BMPR1AP36894 532 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 PRCPP42785 496 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 STX17P56962 302 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 STK4Q13043 487 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 GPM6BQ13491 265 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 PRPF4BQ13523 1007 aaKnown RBP13.76□□□□□ -0.21
PAX6-272ENST00000640460 UBXN11Q5T124 520 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 HAUS6Q7Z4H7 955 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 CDR2LQ86X02 465 aaPredicted RBP13.76□□□□□ -0.21
PAX6-272ENST00000640460 FAM178BQ8IXR5 827 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 TRAIPQ9BWF2 469 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 ELAC1Q9H777 363 aaKnown RBP13.76□□□□□ -0.21
PAX6-272ENST00000640460 RNF19AQ9NV58 838 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 PANK4Q9NVE7 773 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 RMND1Q9NWS8 449 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 TMEM161AQ9NX61 479 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 DACH1Q9UI36 760 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 A0A0U1RQF3 1178 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 A0A1B0GUA9 196 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 K7ENM7 598 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 FGFR1P11362 822 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 ZNF18P17022 549 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 GAP43P17677 238 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 AXLP30530 894 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 ASIC1P78348 528 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 NCBP1Q09161 790 aaKnown RBP13.76□□□□□ -0.21
PAX6-272ENST00000640460 HERC4Q5GLZ8 1057 aaPredicted RBP13.76□□□□□ -0.21
PAX6-272ENST00000640460 KLHL10Q6JEL2 608 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 NOTUMQ6P988 496 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 ECHDC2Q86YB7 292 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 ADSSL1Q8N142 457 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 KCNN1Q92952 543 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 HPS3Q969F9 1004 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 SAMSN1Q9NSI8 373 aaKnown RBP13.76□□□□□ -0.21
PAX6-272ENST00000640460 TBC1D7Q9P0N9 293 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 HCSTQ9UBK5 93 aa13.76□□□□□ -0.21
PAX6-272ENST00000640460 MAPK8IP1Q9UQF2 711 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms