RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 PCDHA5Q9Y5H7 936 aa8.81□□□□□ -1
SCARB2-220ENST00000640076 IGSF9BQ9UPX0 1349 aa8.8□□□□□ -1
SCARB2-220ENST00000640076 AKAP10O43572 662 aa8.8□□□□□ -1
SCARB2-220ENST00000640076 ADCY3O60266 1144 aa8.8□□□□□ -1
SCARB2-220ENST00000640076 GIPRP48546 466 aa8.8□□□□□ -1
SCARB2-220ENST00000640076 PRMT2P55345 433 aa8.8□□□□□ -1
SCARB2-220ENST00000640076 TRIM32Q13049 653 aa8.8□□□□□ -1
SCARB2-220ENST00000640076 CUL4BQ13620 913 aa8.8□□□□□ -1
SCARB2-220ENST00000640076 INTS6LQ5JSJ4 861 aaKnown RBP8.8□□□□□ -1
SCARB2-220ENST00000640076 NT5DC1Q5TFE4 455 aa8.8□□□□□ -1
SCARB2-220ENST00000640076 SLITRK4Q8IW52 837 aa8.8□□□□□ -1
SCARB2-220ENST00000640076 SYT2Q8N9I0 419 aaPredicted RBP8.8□□□□□ -1
SCARB2-220ENST00000640076 PPTC7Q8NI37 304 aa8.8□□□□□ -1
SCARB2-220ENST00000640076 RAET1EQ8TD07 263 aa8.8□□□□□ -1
SCARB2-220ENST00000640076 PCYT2Q99447 389 aa8.8□□□□□ -1
SCARB2-220ENST00000640076 C7orf25Q9BPX7 421 aa8.8□□□□□ -1
SCARB2-220ENST00000640076 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.8□□□□□ -1
SCARB2-220ENST00000640076 ASPSCR1Q9BZE9 553 aa8.8□□□□□ -1
SCARB2-220ENST00000640076 TRIM9Q9C026 710 aa8.8□□□□□ -1
SCARB2-220ENST00000640076 BLZF1Q9H2G9 400 aa8.8□□□□□ -1
SCARB2-220ENST00000640076 BHMT2Q9H2M3 363 aa8.8□□□□□ -1
SCARB2-220ENST00000640076 PFDN2Q9UHV9 154 aa8.8□□□□□ -1
SCARB2-220ENST00000640076 FAM184BQ9ULE4 1060 aa8.8□□□□□ -1
SCARB2-220ENST00000640076 USP3Q9Y6I4 520 aa8.8□□□□□ -1
SCARB2-220ENST00000640076 SERTM1A2A2V5 107 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 MYMKA6NI61 221 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 DKC1O60832 514 aaKnown RBP eCLIP8.79□□□□□ -1
SCARB2-220ENST00000640076 STBD1O95210 358 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 SMC2O95347 1197 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 XRCC6P12956 609 aaKnown RBP eCLIP8.79□□□□□ -1
SCARB2-220ENST00000640076 CYP11B2P19099 503 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 YWHABP31946 246 aaKnown RBP8.79□□□□□ -1
SCARB2-220ENST00000640076 SARSP49591 514 aaKnown RBP8.79□□□□□ -1
SCARB2-220ENST00000640076 GUCY2FP51841 1108 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 SH3PXD2AQ5TCZ1 1133 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 CNNM4Q6P4Q7 775 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 SPATC1Q76KD6 591 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 OR6J1Q8NGC5 347 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 AFAP1L1Q8TED9 768 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 AFG1LQ8WV93 481 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 SMARCE1Q969G3 411 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 NKD1Q969G9 470 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 LENG1Q96BZ8 264 aaPredicted RBP8.79□□□□□ -1
SCARB2-220ENST00000640076 FUCA2Q9BTY2 467 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 LRRC27Q9C0I9 530 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 ZNF302Q9NR11 478 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 DBR1Q9UK59 544 aaKnown RBP8.79□□□□□ -1
SCARB2-220ENST00000640076 SCINQ9Y6U3 715 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 EMSYQ7Z589 1322 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 DYNC1LI2O43237 492 aaPredicted RBP8.79□□□□□ -1
SCARB2-220ENST00000640076 HMGCRP04035 888 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 HOXD8P13378 290 aaPredicted RBP8.79□□□□□ -1
SCARB2-220ENST00000640076 AKR1A1P14550 325 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 ATP4AP20648 1035 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 MAN1A1P33908 653 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 RARRES1P49788 294 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 STAT5BP51692 787 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 PRKCEQ02156 737 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 TYRO3Q06418 890 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 CACNB2Q08289 660 aaPredicted RBP8.79□□□□□ -1
SCARB2-220ENST00000640076 MAPRE1Q15691 268 aaKnown RBP8.79□□□□□ -1
SCARB2-220ENST00000640076 FXNQ16595 210 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 TMEM95Q3KNT9 176 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 LINC01559Q495D7 138 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 UTP14CQ5TAP6 766 aaKnown RBP8.79□□□□□ -1
SCARB2-220ENST00000640076 FAM160B1Q5W0V3 765 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 LRSAM1Q6UWE0 723 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 XKR5Q6UX68 686 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 ANO5Q75V66 913 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 RNF180Q86T96 592 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 TLK2Q86UE8 772 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 GPBP1Q86WP2 473 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 C3orf58Q8NDZ4 430 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 CEP63Q96MT8 703 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 GSDMAQ96QA5 445 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 AZI2Q9H6S1 392 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 ANKEF1Q9NU02 776 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 TRIM17Q9Y577 477 aa8.79□□□□□ -1
SCARB2-220ENST00000640076 TMEM150BA6NC51 233 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 BIN1O00499 593 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 CDK2AP1O14519 115 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 SEPT4O43236 478 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 KLRC4O43908 158 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 RPN1P04843 607 aaKnown RBP8.78□□□□□ -1
SCARB2-220ENST00000640076 CCDC192P0DO97 292 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 NEK2P51955 445 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 ASIC1P78348 528 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 XKR3Q5GH77 459 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 PERM1Q5SV97 790 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 MAP3K21Q5TCX8 1036 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 ICE2Q659A1 982 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 SASS6Q6UVJ0 657 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 DYMQ7RTS9 669 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 PLPPR4Q7Z2D5 763 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 TRMT1LQ7Z2T5 733 aaKnown RBP8.78□□□□□ -1
SCARB2-220ENST00000640076 UBR7Q8N806 425 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 PHC3Q8NDX5 983 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 GLG1Q92896 1179 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 DNAJC19Q96DA6 116 aa8.78□□□□□ -1
SCARB2-220ENST00000640076 RUSC1Q9BVN2 902 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms