RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 SLC30A3Q99726 388 aa8.29□□□□□ -1.08
NECAP1-220ENST00000639841 IRX2Q9BZI1 471 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-220ENST00000639841 MKRN2Q9H000 416 aaKnown RBP8.29□□□□□ -1.08
NECAP1-220ENST00000639841 ADAM19Q9H013 955 aa8.29□□□□□ -1.08
NECAP1-220ENST00000639841 TAOK3Q9H2K8 898 aa8.29□□□□□ -1.08
NECAP1-220ENST00000639841 MBIPQ9NS73 344 aa8.29□□□□□ -1.08
NECAP1-220ENST00000639841 SRP68Q9UHB9 627 aaKnown RBP8.29□□□□□ -1.08
NECAP1-220ENST00000639841 GPR55Q9Y2T6 319 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-220ENST00000639841 CCDC88AQ3V6T2 1871 aa8.29□□□□□ -1.08
NECAP1-220ENST00000639841 SOX1O00570 391 aaPredicted RBP8.28□□□□□ -1.08
NECAP1-220ENST00000639841 IRAK2O43187 625 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 ZBED4O75132 1171 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 CD2BP2O95400 341 aaKnown RBP8.28□□□□□ -1.08
NECAP1-220ENST00000639841 HARSP12081 509 aaKnown RBP8.28□□□□□ -1.08
NECAP1-220ENST00000639841 SLC9A1P19634 815 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 GBP1P32455 592 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 ZNF445P59923 1031 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 FAM110CQ1W6H9 321 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 TOR2AQ5JU69 321 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 GJC2Q5T442 439 aaPredicted RBP8.28□□□□□ -1.08
NECAP1-220ENST00000639841 CFAP58Q5T655 872 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 LMBR1LQ6UX01 489 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 SMIM5Q71RC9 77 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 CISD2Q8N5K1 135 aaKnown RBP8.28□□□□□ -1.08
NECAP1-220ENST00000639841 ZNF610Q8N9Z0 462 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 SSH1Q8WYL5 1049 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 CCDC74BQ96LY2 380 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 MPHOSPH8Q99549 860 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 DPH2Q9BQC3 489 aaPredicted RBP8.28□□□□□ -1.08
NECAP1-220ENST00000639841 NRSN2Q9GZP1 204 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 KRT82Q9NSB4 513 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 NPFFR2Q9Y5X5 522 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 IPO5O00410 1097 aaKnown RBP8.28□□□□□ -1.08
NECAP1-220ENST00000639841 ITGA4P13612 1032 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 CTSSP25774 331 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 AFF1P51825 1210 aaKnown RBP8.28□□□□□ -1.08
NECAP1-220ENST00000639841 CLNS1AP54105 237 aaKnown RBP8.28□□□□□ -1.08
NECAP1-220ENST00000639841 ETF1P62495 437 aaKnown RBP8.28□□□□□ -1.08
NECAP1-220ENST00000639841 SPEM2Q0P670 501 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 PPP2R5DQ14738 602 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 SULT6B1Q6IMI4 303 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 TTC30AQ86WT1 665 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 DNAJC10Q8IXB1 793 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 CARNMT1Q8N4J0 409 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 HTRA1Q92743 480 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 ZFYVE21Q9BQ24 234 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 ABCG4Q9H172 646 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 ZSWIM5Q9P217 1185 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 LRFN1Q9P244 771 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 MAFFQ9ULX9 164 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 KNSTRNQ9Y448 316 aa8.28□□□□□ -1.08
NECAP1-220ENST00000639841 BCORQ6W2J9 1755 aa8.27□□□□□ -1.09
NECAP1-220ENST00000639841 CCDC66A2RUB6 948 aa8.27□□□□□ -1.09
NECAP1-220ENST00000639841 B4DLN1 442 aa8.27□□□□□ -1.09
NECAP1-220ENST00000639841 DVL2O14641 736 aa8.27□□□□□ -1.09
NECAP1-220ENST00000639841 KDM1AO60341 852 aa8.27□□□□□ -1.09
NECAP1-220ENST00000639841 GSNP06396 782 aa8.27□□□□□ -1.09
NECAP1-220ENST00000639841 THP07101 528 aa8.27□□□□□ -1.09
NECAP1-220ENST00000639841 CTSBP07858 339 aa8.27□□□□□ -1.09
NECAP1-220ENST00000639841 LSP1P33241 339 aa8.27□□□□□ -1.09
NECAP1-220ENST00000639841 DNM2P50570 870 aa8.27□□□□□ -1.09
NECAP1-220ENST00000639841 AUHQ13825 339 aaKnown RBP8.27□□□□□ -1.09
NECAP1-220ENST00000639841 KRT32Q14532 448 aa8.27□□□□□ -1.09
NECAP1-220ENST00000639841 SLC35G1Q2M3R5 365 aa8.27□□□□□ -1.09
NECAP1-220ENST00000639841 TRMT2AQ8IZ69 625 aaKnown RBP8.27□□□□□ -1.09
NECAP1-220ENST00000639841 GALNT15Q8N3T1 639 aa8.27□□□□□ -1.09
NECAP1-220ENST00000639841 ZFPM2Q8WW38 1151 aa8.27□□□□□ -1.09
NECAP1-220ENST00000639841 ELF4Q99607 663 aaPredicted RBP8.27□□□□□ -1.09
NECAP1-220ENST00000639841 DESI2Q9BSY9 194 aa8.27□□□□□ -1.09
NECAP1-220ENST00000639841 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.27□□□□□ -1.09
NECAP1-220ENST00000639841 GHITMQ9H3K2 345 aa8.27□□□□□ -1.09
NECAP1-220ENST00000639841 SH2B1Q9NRF2 756 aaPredicted RBP8.27□□□□□ -1.09
NECAP1-220ENST00000639841 IRAK4Q9NWZ3 460 aa8.27□□□□□ -1.09
NECAP1-220ENST00000639841 DACT1Q9NYF0 836 aa8.27□□□□□ -1.09
NECAP1-220ENST00000639841 TBC1D29Q9UFV1 150 aa8.27□□□□□ -1.09
NECAP1-220ENST00000639841 SPO11Q9Y5K1 396 aa8.27□□□□□ -1.09
NECAP1-220ENST00000639841 DCDC2BA2VCK2 349 aa8.26□□□□□ -1.09
NECAP1-220ENST00000639841 RNMTO43148 476 aaKnown RBP8.26□□□□□ -1.09
NECAP1-220ENST00000639841 SMNDC1O75940 238 aaKnown RBP eCLIP8.26□□□□□ -1.09
NECAP1-220ENST00000639841 MAP2K1Q02750 393 aaPredicted RBP8.26□□□□□ -1.09
NECAP1-220ENST00000639841 FOXO1Q12778 655 aa8.26□□□□□ -1.09
NECAP1-220ENST00000639841 PAK1Q13153 545 aa8.26□□□□□ -1.09
NECAP1-220ENST00000639841 IKBKEQ14164 716 aa8.26□□□□□ -1.09
NECAP1-220ENST00000639841 FBXO47Q5MNV8 452 aa8.26□□□□□ -1.09
NECAP1-220ENST00000639841 KCNK18Q7Z418 384 aa8.26□□□□□ -1.09
NECAP1-220ENST00000639841 SIAH1Q8IUQ4 282 aa8.26□□□□□ -1.09
NECAP1-220ENST00000639841 MRPL41Q8IXM3 137 aaKnown RBP8.26□□□□□ -1.09
NECAP1-220ENST00000639841 CCDC191Q8NCU4 936 aa8.26□□□□□ -1.09
NECAP1-220ENST00000639841 ZMIZ2Q8NF64 920 aa8.26□□□□□ -1.09
NECAP1-220ENST00000639841 OR8H1Q8NGG4 311 aa8.26□□□□□ -1.09
NECAP1-220ENST00000639841 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.26□□□□□ -1.091e-8■■■■■ 31.4
NECAP1-220ENST00000639841 HERVK_113Q902F9 699 aa8.26□□□□□ -1.09
NECAP1-220ENST00000639841 ERCC4Q92889 916 aaPredicted RBP8.26□□□□□ -1.09
NECAP1-220ENST00000639841 RILPL2Q969X0 211 aa8.26□□□□□ -1.09
NECAP1-220ENST00000639841 MASTLQ96GX5 879 aa8.26□□□□□ -1.09
NECAP1-220ENST00000639841 BAG1Q99933 345 aaPredicted RBP8.26□□□□□ -1.09
NECAP1-220ENST00000639841 OBP2BQ9NPH6 170 aa8.26□□□□□ -1.09
NECAP1-220ENST00000639841 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.26□□□□□ -1.09
NECAP1-220ENST00000639841 PA2G4Q9UQ80 394 aaKnown RBP8.26□□□□□ -1.09
NECAP1-220ENST00000639841 ANKRD31Q8N7Z5 1873 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms