RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 IL27RAQ6UWB1 636 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 TAOK1Q7L7X3 1001 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 GALNT11Q8NCW6 608 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 RAVER2Q9HCJ3 691 aaKnown RBP4.12□□□□□ -1.75
CCDC7-213ENST00000639290 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.12□□□□□ -1.75
CCDC7-213ENST00000639290 ABCF2Q9UG63 623 aa4.12□□□□□ -1.75
CCDC7-213ENST00000639290 NAV3Q8IVL0 2385 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 ITPR2Q14571 2701 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 A0A0G2JK05 382 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 PTPDC1A2A3K4 754 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 TMEM200CA6NKL6 621 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 C9IYK1 514 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 PLK4O00444 970 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 FOSL1P15407 271 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 CAPN3P20807 821 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 PTGS1P23219 599 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 GGCXP38435 758 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 PAK2Q13177 524 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 ILKQ13418 452 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 ATP2B3Q16720 1220 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 FBXO43Q4G163 708 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 IER5Q5VY09 327 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 SYT13Q7L8C5 426 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 EEPD1Q7L9B9 569 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 RASSF3Q86WH2 238 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 PNPLA1Q8N8W4 532 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 TTC13Q8NBP0 860 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 DNAAF4Q8WXU2 420 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 FGF13Q92913 245 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 MRRFQ96E11 262 aaKnown RBP4.11□□□□□ -1.75
CCDC7-213ENST00000639290 HEXIM2Q96MH2 286 aaKnown RBP4.11□□□□□ -1.75
CCDC7-213ENST00000639290 CASD1Q96PB1 797 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 HERC2P3Q9BVR0 1158 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 TRPV4Q9HBA0 871 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 FBN1P35555 2871 aaKnown RBP4.11□□□□□ -1.75
CCDC7-213ENST00000639290 CACNA1DQ01668 2161 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 IGSF9BQ9UPX0 1349 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 DENND3A2RUS2 1198 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 GRM8O00222 908 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 XYLBO75191 536 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 ALDH1L1O75891 902 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 MRPS6P82932 125 aaKnown RBP4.11□□□□□ -1.75
CCDC7-213ENST00000639290 RASGRF1Q13972 1273 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 SUZ12Q15022 739 aaKnown RBP4.11□□□□□ -1.75
CCDC7-213ENST00000639290 SGO2Q562F6 1265 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 LYSMD4Q5XG99 296 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 B4GALNT3Q6L9W6 998 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 PADI6Q6TGC4 694 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 OLIG1Q8TAK6 271 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 RFFLQ8WZ73 363 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 SPACA7Q96KW9 195 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 DRC1Q96MC2 740 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 MBOAT7Q96N66 472 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 TRERF1Q96PN7 1200 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 MTRQ99707 1265 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 LPIN3Q9BQK8 851 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 LZTS2Q9BRK4 669 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 FAM124BQ9H5Z6 455 aaPredicted RBP4.11□□□□□ -1.75
CCDC7-213ENST00000639290 CPNE5Q9HCH3 593 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 LATS2Q9NRM7 1088 aa4.11□□□□□ -1.75
CCDC7-213ENST00000639290 MRPL17Q9NRX2 175 aaKnown RBP4.11□□□□□ -1.75
CCDC7-213ENST00000639290 M0QZ92 97 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 EYA2O00167 538 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 BRINP1O60477 761 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 SEMG2Q02383 582 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 NEUROD1Q13562 356 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 MVPQ14764 893 aaKnown RBP4.1□□□□□ -1.75
CCDC7-213ENST00000639290 ARL13BQ3SXY8 428 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 KANSL1Q7Z3B3 1105 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 ARID3BQ8IVW6 561 aaPredicted RBP4.1□□□□□ -1.75
CCDC7-213ENST00000639290 SPICE1Q8N0Z3 855 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 DAGLBQ8NCG7 672 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 CSGALNACT1Q8TDX6 532 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 CNOT6LQ96LI5 555 aaKnown RBP4.1□□□□□ -1.75
CCDC7-213ENST00000639290 IWS1Q96ST2 819 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 MDFIQ99750 246 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 KXD1Q9BQD3 176 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 ARHGAP9Q9BRR9 750 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 POLR3GLQ9BT43 218 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 FNIP2Q9P278 1114 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 TRPV2Q9Y5S1 764 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 MTORP42345 2549 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 HIVEP3Q5T1R4 2406 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 A0A1W2PQD8 194 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 PAPSS1O43252 624 aaPredicted RBP4.1□□□□□ -1.75
CCDC7-213ENST00000639290 CER1O95813 267 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 CNPP09543 421 aaKnown RBP4.1□□□□□ -1.75
CCDC7-213ENST00000639290 DHPSP49366 369 aaPredicted RBP4.1□□□□□ -1.75
CCDC7-213ENST00000639290 SKOR1P84550 965 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 SCRN1Q12765 414 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 PTPRNQ16849 979 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 KRT24Q2M2I5 525 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 LRRC24Q50LG9 513 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 CCDC102BQ68D86 513 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 NAA16Q6N069 864 aaPredicted RBP4.1□□□□□ -1.75
CCDC7-213ENST00000639290 SLC36A4Q6YBV0 504 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 CPXCR1Q8N123 301 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 NME8Q8N427 588 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 FAM200AQ8TCP9 573 aa4.1□□□□□ -1.75
CCDC7-213ENST00000639290 IGSF21Q96ID5 467 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms