RNA–Protein interactions for RNA: ENST00000639038.1

NECAP1-214, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,423 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-214ENST00000639038 SSRP1Q08945 709 aaKnown RBP9.03□□□□□ -0.96
NECAP1-214ENST00000639038 SLC14A2Q15849 920 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 ECM1Q16610 540 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 C15orf59Q2T9L4 293 aaPredicted RBP9.03□□□□□ -0.96
NECAP1-214ENST00000639038 ASPRV1Q53RT3 343 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 FAM47EQ6ZV65 393 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 TCEAL8Q8IYN2 117 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.03□□□□□ -0.96
NECAP1-214ENST00000639038 NPLOC4Q8TAT6 608 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 GPT2Q8TD30 523 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 DCAF4Q8WV16 495 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 PPP1R9BQ96SB3 815 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 SMAD5Q99717 465 aaKnown RBP9.03□□□□□ -0.96
NECAP1-214ENST00000639038 GLIS2Q9BZE0 524 aaPredicted RBP9.03□□□□□ -0.96
NECAP1-214ENST00000639038 B3GNT4Q9C0J1 378 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 PARVGQ9HBI0 331 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 DNAAF2Q9NVR5 837 aaKnown RBP9.03□□□□□ -0.96
NECAP1-214ENST00000639038 MTRRQ9UBK8 725 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 GRID1Q9ULK0 1009 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 CLEC11AQ9Y240 323 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 A0A1W2PRG0 241 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 USP17L5A8MUK1 530 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 PDLIM1O00151 329 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 DDHD2O94830 711 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 PLEKHA8P1O95397 391 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 CNOT4O95628 575 aaKnown RBP9.03□□□□□ -0.96
NECAP1-214ENST00000639038 POTEIP0CG38 1075 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 POTEJP0CG39 1038 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 PSMA4P25789 261 aaKnown RBP9.03□□□□□ -0.96
NECAP1-214ENST00000639038 HADHAP40939 763 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 HAAOP46952 286 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 DR1Q01658 176 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 ATP2B2Q01814 1243 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 TMEM62Q0P6H9 643 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 MAP3K11Q16584 847 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 HS1BP3Q53T59 392 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 NEK5Q6P3R8 708 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 DLK2Q6UY11 383 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 SRBD1Q8N5C6 995 aaKnown RBP9.03□□□□□ -0.96
NECAP1-214ENST00000639038 IL17RDQ8NFM7 739 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 CTAGE1Q96RT6 745 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 WRNIP1Q96S55 665 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 NUDT16L1Q9BRJ7 211 aaKnown RBP9.03□□□□□ -0.96
NECAP1-214ENST00000639038 TMUB1Q9BVT8 246 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 RNF26Q9BY78 433 aaPredicted RBP9.03□□□□□ -0.96
NECAP1-214ENST00000639038 MFRPQ9BY79 579 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 EDEM3Q9BZQ6 932 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 TRIM4Q9C037 500 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 SH2D4AQ9H788 454 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 NMRK2Q9NPI5 230 aa9.03□□□□□ -0.96
NECAP1-214ENST00000639038 A1CFQ9NQ94 594 aaKnown RBP9.03□□□□□ -0.96
NECAP1-214ENST00000639038 ORC3Q9UBD5 711 aaPredicted RBP9.03□□□□□ -0.96
NECAP1-214ENST00000639038 SORBS3O60504 671 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 CAVIN2O95810 425 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 KRT1P04264 644 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 CAPNS1P04632 268 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 P4HA1P13674 534 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 SYT1P21579 422 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 XPAP23025 273 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-214ENST00000639038 MAP3K9P80192 1104 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 ZNF543Q08ER8 600 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 CAMK2BQ13554 666 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 PPA1Q15181 289 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 FAM102BQ5T8I3 360 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 SLFN13Q68D06 897 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 FCRLBQ6BAA4 426 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 XRRA1Q6P2D8 792 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 BNC2Q6ZN30 1099 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-214ENST00000639038 HOMER1Q86YM7 354 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 RGL4Q8IZJ4 473 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 NKAPQ8N5F7 415 aaKnown RBP9.02□□□□□ -0.97
NECAP1-214ENST00000639038 CCDC150Q8NCX0 1101 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 CCDC110Q8TBZ0 833 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 ACER1Q8TDN7 264 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 CDKL2Q92772 493 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 ALKBH8Q96BT7 664 aaKnown RBP9.02□□□□□ -0.97
NECAP1-214ENST00000639038 C16orf45Q96MC5 204 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-214ENST00000639038 PURBQ96QR8 312 aaKnown RBP9.02□□□□□ -0.97
NECAP1-214ENST00000639038 WDR18Q9BV38 432 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 SARGQ9BW04 601 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 SPZ1Q9BXG8 430 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 HOMER3Q9NSC5 361 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 FKBP14Q9NWM8 211 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 CNTNAP5Q8WYK1 1306 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 KLRF2D3W0D1 207 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 F5H6K3 240 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 DTNBO60941 627 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 DGKIO75912 1065 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 POLR2BP30876 1174 aaKnown RBP9.02□□□□□ -0.97
NECAP1-214ENST00000639038 SSTR3P32745 418 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-214ENST00000639038 IREB2P48200 963 aaKnown RBP9.02□□□□□ -0.97
NECAP1-214ENST00000639038 PLTPP55058 493 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 B2MP61769 119 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 KLRC3Q07444 240 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 SLC45A4Q5BKX6 768 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 FAM173BQ6P4H8 233 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 CNSTQ6PJW8 725 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 USP17L2Q6R6M4 530 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 TOGARAM2Q6ZUX3 1019 aa9.02□□□□□ -0.97
NECAP1-214ENST00000639038 SLC9B2Q86UD5 537 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms