RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 GAS7O60861 476 aa4.84□□□□□ -1.63
GABRA1-220ENST00000638159 F2P00734 622 aa4.84□□□□□ -1.63
GABRA1-220ENST00000638159 CYBBP04839 570 aa4.84□□□□□ -1.63
GABRA1-220ENST00000638159 SLURP2P0DP57 97 aa4.84□□□□□ -1.63
GABRA1-220ENST00000638159 HARSP12081 509 aaKnown RBP4.84□□□□□ -1.63
GABRA1-220ENST00000638159 NT5C2P49902 561 aa4.84□□□□□ -1.63
GABRA1-220ENST00000638159 CSRP3P50461 194 aa4.84□□□□□ -1.63
GABRA1-220ENST00000638159 CRYBB1P53674 252 aaPredicted RBP4.84□□□□□ -1.63
GABRA1-220ENST00000638159 C12orf60Q5U649 245 aa4.84□□□□□ -1.63
GABRA1-220ENST00000638159 SYT12Q8IV01 421 aa4.84□□□□□ -1.63
GABRA1-220ENST00000638159 LSM14AQ8ND56 463 aaKnown RBP4.84□□□□□ -1.63
GABRA1-220ENST00000638159 BICD2Q8TD16 824 aa4.84□□□□□ -1.63
GABRA1-220ENST00000638159 FGF11Q92914 225 aa4.84□□□□□ -1.63
GABRA1-220ENST00000638159 RNF34Q969K3 372 aa4.84□□□□□ -1.63
GABRA1-220ENST00000638159 LSM14BQ9BX40 385 aaKnown RBP4.84□□□□□ -1.63
GABRA1-220ENST00000638159 MAF1Q9H063 256 aa4.84□□□□□ -1.63
GABRA1-220ENST00000638159 CHRDQ9H2X0 955 aa4.84□□□□□ -1.63
GABRA1-220ENST00000638159 PRKRIP1Q9H875 184 aaPredicted RBP4.84□□□□□ -1.63
GABRA1-220ENST00000638159 KCNH3Q9ULD8 1083 aa4.84□□□□□ -1.63
GABRA1-220ENST00000638159 PCDHB3Q9Y5E6 796 aa4.84□□□□□ -1.63
GABRA1-220ENST00000638159 GTF3C3Q9Y5Q9 886 aa4.84□□□□□ -1.63
GABRA1-220ENST00000638159 AFDNP55196 1824 aaKnown RBP4.84□□□□□ -1.63
GABRA1-220ENST00000638159 WDR19Q8NEZ3 1342 aa4.84□□□□□ -1.63
GABRA1-220ENST00000638159 CNTNAP2Q9UHC6 1331 aa4.84□□□□□ -1.63
GABRA1-220ENST00000638159 MYH14Q7Z406 1995 aaKnown RBP4.84□□□□□ -1.64
GABRA1-220ENST00000638159 C2CD3Q4AC94 2353 aa4.84□□□□□ -1.64
GABRA1-220ENST00000638159 MYF5P13349 255 aa4.84□□□□□ -1.64
GABRA1-220ENST00000638159 CDC25CP30307 473 aa4.84□□□□□ -1.64
GABRA1-220ENST00000638159 LIMK1P53667 647 aa4.84□□□□□ -1.64
GABRA1-220ENST00000638159 C16orf86Q6ZW13 317 aa4.84□□□□□ -1.64
GABRA1-220ENST00000638159 ANKS3Q6ZW76 656 aa4.84□□□□□ -1.64
GABRA1-220ENST00000638159 KDELC2Q7Z4H8 507 aa4.84□□□□□ -1.64
GABRA1-220ENST00000638159 ADGRD2Q7Z7M1 963 aa4.84□□□□□ -1.64
GABRA1-220ENST00000638159 FAM212AQ96EL1 285 aa4.84□□□□□ -1.64
GABRA1-220ENST00000638159 GMCL1Q96IK5 515 aa4.84□□□□□ -1.64
GABRA1-220ENST00000638159 CDK5RAP3Q96JB5 506 aa4.84□□□□□ -1.64
GABRA1-220ENST00000638159 LZTS2Q9BRK4 669 aa4.84□□□□□ -1.64
GABRA1-220ENST00000638159 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.84□□□□□ -1.64
GABRA1-220ENST00000638159 SLC38A7Q9NVC3 462 aa4.84□□□□□ -1.64
GABRA1-220ENST00000638159 CACNA1EQ15878 2313 aa4.84□□□□□ -1.64
GABRA1-220ENST00000638159 F5P12259 2224 aa4.84□□□□□ -1.64
GABRA1-220ENST00000638159 CCDC196A0A1B0GTZ2 297 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 RIOK3O14730 519 aaKnown RBP4.83□□□□□ -1.64
GABRA1-220ENST00000638159 RNF113AO15541 343 aaKnown RBP4.83□□□□□ -1.64
GABRA1-220ENST00000638159 FGFR1P11362 822 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 MAP3K10Q02779 954 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 PPARAQ07869 468 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 UBE3CQ15386 1083 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 CTXN3Q4LDR2 81 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.83□□□□□ -1.64
GABRA1-220ENST00000638159 SCUBE3Q8IX30 993 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 SRBD1Q8N5C6 995 aaKnown RBP4.83□□□□□ -1.64
GABRA1-220ENST00000638159 GMCL1P1Q8NEA9 526 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 XPO6Q96QU8 1125 aaKnown RBP4.83□□□□□ -1.64
GABRA1-220ENST00000638159 TTPALQ9BTX7 342 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 ELAC1Q9H777 363 aaKnown RBP4.83□□□□□ -1.64
GABRA1-220ENST00000638159 MAGED2Q9UNF1 606 aaPredicted RBP4.83□□□□□ -1.64
GABRA1-220ENST00000638159 GNEQ9Y223 722 aaKnown RBP4.83□□□□□ -1.64
GABRA1-220ENST00000638159 TRABD2BA6NFA1 517 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 PI15O43692 258 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 ZNF217O75362 1048 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 CT47B1P0C2W7 299 aaPredicted RBP4.83□□□□□ -1.64
GABRA1-220ENST00000638159 JMJD7P0C870 316 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 DRD1P21728 446 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 PMLP29590 882 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 EVX2Q03828 476 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 KCNH2Q12809 1159 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 CHPFQ8IZ52 775 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 SLC43A3Q8NBI5 491 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 PNMA1Q8ND90 353 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 RASGRP4Q8TDF6 673 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 P2RY13Q9BPV8 354 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 PSTPIP2Q9H939 334 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 CHST12Q9NRB3 414 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 NAV3Q8IVL0 2385 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 FAM47DPA6NHR8 397 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 NFIBO00712 420 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 DGKIO75912 1065 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 B3GAT3O94766 335 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 PCP11498 1178 aaKnown RBP4.83□□□□□ -1.64
GABRA1-220ENST00000638159 HOXA13P31271 388 aaPredicted RBP4.83□□□□□ -1.64
GABRA1-220ENST00000638159 GRK6P43250 576 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 CASP6P55212 293 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 PCBP4P57723 403 aaKnown RBP4.83□□□□□ -1.64
GABRA1-220ENST00000638159 ERVFC1P60507 584 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 E2F1Q01094 437 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 PDGFRLQ15198 375 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 MGAT5BQ3V5L5 792 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 RNF20Q5VTR2 975 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 NOTUMQ6P988 496 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 DDX53Q86TM3 631 aaKnown RBP4.83□□□□□ -1.64
GABRA1-220ENST00000638159 ARL14Q8N4G2 192 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 ERMNQ8TAM6 284 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 LMBR1Q8WVP7 490 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 SCG3Q8WXD2 468 aaKnown RBP4.83□□□□□ -1.64
GABRA1-220ENST00000638159 SMARCD2Q92925 531 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 HHIPQ96QV1 700 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 SENP7Q9BQF6 1050 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 TMEM175Q9BSA9 504 aa4.83□□□□□ -1.64
GABRA1-220ENST00000638159 TPSD1Q9BZJ3 242 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms