RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 PPATQ06203 517 aa10.44□□□□□ -0.74
CACNA1A-248ENST00000637774 LNX1Q8TBB1 728 aaPredicted RBP10.44□□□□□ -0.74
CACNA1A-248ENST00000637774 RIN2Q8WYP3 895 aaPredicted RBP10.44□□□□□ -0.74
CACNA1A-248ENST00000637774 SEMA4DQ92854 862 aa10.44□□□□□ -0.74
CACNA1A-248ENST00000637774 NXF1Q9UBU9 619 aaKnown RBP10.44□□□□□ -0.74
CACNA1A-248ENST00000637774 PCDHB4Q9Y5E5 795 aa10.44□□□□□ -0.74
CACNA1A-248ENST00000637774 UBE4BO95155 1302 aa10.44□□□□□ -0.74
CACNA1A-248ENST00000637774 LRRIQ3A6PVS8 624 aaPredicted RBP10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 BUB1BO60566 1050 aaPredicted RBP10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 MMEP08473 750 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 TRPC3Q13507 836 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 ZBTB41Q5SVQ8 909 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 TMEM270Q6UE05 265 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 RIOX2Q8IUF8 465 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 ZBTB8OSQ8IWT0 167 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 RPGRIP1Q96KN7 1286 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 DPH5Q9H2P9 285 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 DMAC2Q9NW81 257 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 CCL15-CCL14A0A0B4J2E2 113 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 CD19P15391 556 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 GLRA2P23416 452 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 MCM3P25205 808 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 PLA2G4AP47712 749 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 TMEM62Q0P6H9 643 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 CCL15Q16663 113 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 FOXR2Q6PJQ5 311 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 FASTKD5Q7L8L6 764 aaKnown RBP10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 MAP4K3Q8IVH8 894 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 TEX2Q8IWB9 1127 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 SLC17A8Q8NDX2 589 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 DNERQ8NFT8 737 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 PSPC1Q8WXF1 523 aaKnown RBP10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 ARHGEF26Q96DR7 871 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 RABEP2Q9H5N1 569 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 KIF4AO95239 1232 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 LYPLA2O95372 231 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 ARIH2O95376 493 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 FGGP02679 453 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 BRD2P25440 801 aaKnown RBP10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 TNNC1P63316 161 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 SNAPC2Q13487 334 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 BRDTQ58F21 947 aaPredicted RBP10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 RDM1Q8NG50 284 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 FAM49AQ9H0Q0 323 aaPredicted RBP10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 TSKSQ9UJT2 592 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 NFU1Q9UMS0 254 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 MYH11P35749 1972 aa10.43□□□□□ -0.74
CACNA1A-248ENST00000637774 GTPBP10A4D1E9 387 aaKnown RBP10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 PPP1R37O75864 691 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 SAMD3Q8N6K7 520 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 TPCN2Q8NHX9 752 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 CPA5Q8WXQ8 436 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 FUT8Q9BYC5 575 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 RBPJLQ9UBG7 517 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 FARP2O94887 1054 aaPredicted RBP10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 MYBL2P10244 700 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 MAPTP10636 758 aaKnown RBP10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 NCKAP1LP55160 1127 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 TUBB4BP68371 445 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 CYP24A1Q07973 514 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 MAPK6Q16659 721 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 BEND6Q5SZJ8 279 aaPredicted RBP10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 MAATS1Q7Z4T9 603 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 SYCE1Q8N0S2 351 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 BORCS6Q96GS4 357 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 TIPINQ9BVW5 301 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 TMEM8AQ9HCN3 771 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 BCCIPQ9P287 314 aaKnown RBP eCLIP10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 SUCLA2Q9P2R7 463 aaPredicted RBP10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 AGTPBP1Q9UPW5 1226 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 GSTTP1A0A1W2PQM5 241 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 PJA2O43164 708 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 HLA-DRAP01903 254 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 TMEM191BP0C7N4 346 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 ATP4AP20648 1035 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 TTLL4Q14679 1199 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 C10orf76Q5T2E6 689 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 METTL7BQ6UX53 244 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 CCDC50Q8IVM0 306 aa10.42□□□□□ -0.74
CACNA1A-248ENST00000637774 H0YCG3 227 aa10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 CXCL11O14625 94 aa10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 TMOD1P28289 359 aa10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 ERVK-9P63128 1117 aa10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 CCNA1P78396 465 aa10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 EFCAB12Q6NXP0 572 aa10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 DDX42Q86XP3 938 aaKnown RBP eCLIP10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 SLC9A9Q8IVB4 645 aa10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 ZC3H3Q8IXZ2 948 aaKnown RBP10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 RFFLQ8WZ73 363 aa10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 RNF19AQ9NV58 838 aa10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 AMACRQ9UHK6 382 aa10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 FAN1Q9Y2M0 1017 aa10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 POLR2AP24928 1970 aaKnown RBP10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 SPDYE5A6NIY4 337 aa10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 PDHXO00330 501 aa10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 THAP12O43422 761 aa10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 STAM2O75886 525 aa10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 CELF2O95319 508 aaKnown RBP10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 ZNF286BP0CG31 522 aa10.41□□□□□ -0.74
CACNA1A-248ENST00000637774 ZNF568Q3ZCX4 644 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms