RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 ANKRD40Q6AI12 368 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 EFCAB12Q6NXP0 572 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 LBX2Q6XYB7 198 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 MICALL1Q8N3F8 863 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 TNIP3Q96KP6 325 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 CCDC114Q96M63 670 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 MTMR9Q96QG7 549 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 TMEM134Q9H6X4 195 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 ZCCHC17Q9NP64 241 aaKnown RBP5.93□□□□□ -1.46
CHD2-227ENST00000637572 NXF1Q9UBU9 619 aaKnown RBP5.93□□□□□ -1.46
CHD2-227ENST00000637572 GOLGA8IPA6NC78 632 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 PABPN1LA6NDY0 278 aaKnown RBP5.93□□□□□ -1.46
CHD2-227ENST00000637572 GOLGA8JA6NMD2 632 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 CLTAP09496 248 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 ATP1A3P13637 1013 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 ABCB4P21439 1286 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 ATP5DP30049 168 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 NMT1P30419 496 aaKnown RBP5.93□□□□□ -1.46
CHD2-227ENST00000637572 PNPLA4P41247 253 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 PRMT2P55345 433 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 FAM193AP78312 1265 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 SARNPP82979 210 aaKnown RBP5.93□□□□□ -1.46
CHD2-227ENST00000637572 BFSP1Q12934 665 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 STK4Q13043 487 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 BFSP2Q13515 415 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 TMEM119Q4V9L6 283 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 DNAJC24Q6P3W2 148 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 ZNF771Q7L3S4 317 aaPredicted RBP5.93□□□□□ -1.46
CHD2-227ENST00000637572 SRGAP1Q7Z6B7 1085 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 RNF10Q8N5U6 811 aaKnown RBP5.93□□□□□ -1.46
CHD2-227ENST00000637572 ARFGAP2Q8N6H7 521 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 DYDC1Q8WWB3 177 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 CAPZA3Q96KX2 299 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 NHEJ1Q9H9Q4 299 aaPredicted RBP5.93□□□□□ -1.46
CHD2-227ENST00000637572 CPA4Q9UI42 421 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 AFG3L2Q9Y4W6 797 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 TRIM49BA6NDI0 452 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 MIF4GDA9UHW6 222 aaKnown RBP5.93□□□□□ -1.46
CHD2-227ENST00000637572 MEIS2O14770 477 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 GPR182O15218 404 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 MED24O75448 989 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 RPS6KA5O75582 802 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 IVLP07476 585 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 CFHP08603 1231 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 TAP1Q03518 808 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 SGSM1Q2NKQ1 1148 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 ATF7IP2Q5U623 682 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 ALKBH5Q6P6C2 394 aaKnown RBP5.93□□□□□ -1.46
CHD2-227ENST00000637572 FOXR2Q6PJQ5 311 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 TAX1BP1Q86VP1 789 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 DHX40Q8IX18 779 aaKnown RBP5.93□□□□□ -1.46
CHD2-227ENST00000637572 FAM133AQ8N9E0 248 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 DHX38Q92620 1227 aaKnown RBP5.93□□□□□ -1.46
CHD2-227ENST00000637572 ZNF653Q96CK0 615 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 PBKQ96KB5 322 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 MTG1Q9BT17 334 aaPredicted RBP5.93□□□□□ -1.46
CHD2-227ENST00000637572 INTS2Q9H0H0 1204 aaKnown RBP5.93□□□□□ -1.46
CHD2-227ENST00000637572 TBX20Q9UMR3 447 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 JRKLQ9Y4A0 524 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 ZMYM2Q9UBW7 1377 aa5.93□□□□□ -1.46
CHD2-227ENST00000637572 A0A1W2PRG0 241 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 TYW5A2RUC4 315 aaKnown RBP5.92□□□□□ -1.46
CHD2-227ENST00000637572 ZC3H11AO75152 810 aaKnown RBP eCLIP5.92□□□□□ -1.46
CHD2-227ENST00000637572 TFRCP02786 760 aaKnown RBP5.92□□□□□ -1.46
CHD2-227ENST00000637572 AXLP30530 894 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 GCLMP48507 274 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 KRT81Q14533 505 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 IQCB1Q15051 598 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 SNRNP35Q16560 246 aaKnown RBP5.92□□□□□ -1.46
CHD2-227ENST00000637572 NT5DC1Q5TFE4 455 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 SLC30A10Q6XR72 485 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 TOGARAM2Q6ZUX3 1019 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 USP49Q70CQ1 688 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 TRIM50Q86XT4 487 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 SIX6OS1Q8N1H7 587 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 TMEM143Q96AN5 459 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 EEF2KMTQ96G04 330 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 TMEM8AQ9HCN3 771 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 ABHD10Q9NUJ1 306 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 SEPT3Q9UH03 358 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 CAPN11Q9UMQ6 739 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 A0A1W2PQJ5 194 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 SSU72P8A0A1W2PR75 194 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 E7EVH7 732 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 CASP1P29466 404 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 ELF1P32519 619 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 EIF4A3P38919 411 aaKnown RBP5.92□□□□□ -1.46
CHD2-227ENST00000637572 OSTNP61366 133 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 PAK2Q13177 524 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 ACVR2BQ13705 512 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 BZW1Q7L1Q6 419 aaKnown RBP5.92□□□□□ -1.46
CHD2-227ENST00000637572 SH3BP5LQ7L8J4 393 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 ZNF410Q86VK4 478 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 CCHCR1Q8TD31 782 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 SYN2Q92777 582 aaPredicted RBP5.92□□□□□ -1.46
CHD2-227ENST00000637572 HEXIM2Q96MH2 286 aaKnown RBP5.92□□□□□ -1.46
CHD2-227ENST00000637572 APBA2Q99767 749 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 TINF2Q9BSI4 451 aa5.92□□□□□ -1.46
CHD2-227ENST00000637572 TMEM121BQ9BXQ6 578 aaPredicted RBP5.92□□□□□ -1.46
CHD2-227ENST00000637572 SEZ6LQ9BYH1 1024 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms