RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 CDCA2Q69YH5 1023 aaPredicted RBP23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 KRT39Q6A163 491 aa23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 SV2AQ7L0J3 742 aa23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 TMC2Q8TDI7 906 aa23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 KCNN1Q92952 543 aa23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 EMID1Q96A84 441 aaPredicted RBP23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 ERO1AQ96HE7 468 aa23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 TSGA10Q9BZW7 698 aa23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 TMEM8AQ9HCN3 771 aa23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 PDE11AQ9HCR9 933 aa23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 PPME1Q9Y570 386 aa23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 FAM155AB1AL88 458 aaPredicted RBP23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 BUB1O43683 1085 aa23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 MMP3P08254 477 aa23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 CYP2C19P33261 490 aa23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 ABCD1P33897 745 aa23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 C17orf99Q6UX52 265 aa23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 CDR2LQ86X02 465 aaPredicted RBP23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 OLIG1Q8TAK6 271 aa23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 ZNF516Q92618 1163 aa23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 PI4K2AQ9BTU6 479 aa23.47■■□□□ 1.35
CHRNA7-228ENST00000637519 CSDE1O75534 798 aaKnown RBP23.46■■□□□ 1.35
CHRNA7-228ENST00000637519 PRKCBP05771 671 aa23.46■■□□□ 1.35
CHRNA7-228ENST00000637519 CYP2B6P20813 491 aa23.46■■□□□ 1.35
CHRNA7-228ENST00000637519 CHMP4BP1P59074 171 aa23.46■■□□□ 1.35
CHRNA7-228ENST00000637519 MXD4Q14582 209 aaPredicted RBP23.46■■□□□ 1.35
CHRNA7-228ENST00000637519 ELF2Q15723 593 aa23.46■■□□□ 1.35
CHRNA7-228ENST00000637519 ZNF236Q9UL36 1845 aa23.46■■□□□ 1.35
CHRNA7-228ENST00000637519 A0A0B4J269 797 aa23.45■■□□□ 1.35
CHRNA7-228ENST00000637519 B4GALT5O43286 388 aa23.45■■□□□ 1.35
CHRNA7-228ENST00000637519 GAS2O43903 313 aaKnown RBP23.45■■□□□ 1.35
CHRNA7-228ENST00000637519 FERP16591 822 aa23.45■■□□□ 1.35
CHRNA7-228ENST00000637519 KLRC1P26715 233 aa23.45■■□□□ 1.35
CHRNA7-228ENST00000637519 TNFSF9P41273 254 aa23.45■■□□□ 1.35
CHRNA7-228ENST00000637519 MCCD1P59942 119 aaPredicted RBP23.45■■□□□ 1.35
CHRNA7-228ENST00000637519 CRHR2Q13324 411 aa23.45■■□□□ 1.35
CHRNA7-228ENST00000637519 PPM1KQ8N3J5 372 aa23.45■■□□□ 1.35
CHRNA7-228ENST00000637519 MINDY3Q9H8M7 445 aa23.45■■□□□ 1.35
CHRNA7-228ENST00000637519 RBAKQ9NYW8 714 aaPredicted RBP23.45■■□□□ 1.35
CHRNA7-228ENST00000637519 ABT1Q9ULW3 272 aaKnown RBP23.45■■□□□ 1.35
CHRNA7-228ENST00000637519 H3BRB1 525 aa23.45■■□□□ 1.34
CHRNA7-228ENST00000637519 DDX3XO00571 662 aaKnown RBP eCLIP23.45■■□□□ 1.34
CHRNA7-228ENST00000637519 ZBTB8OSQ8IWT0 167 aa23.45■■□□□ 1.34
CHRNA7-228ENST00000637519 LNX1Q8TBB1 728 aaPredicted RBP23.45■■□□□ 1.34
CHRNA7-228ENST00000637519 KREMEN1Q96MU8 473 aa23.45■■□□□ 1.34
CHRNA7-228ENST00000637519 TUT1Q9H6E5 874 aaKnown RBP23.45■■□□□ 1.34
CHRNA7-228ENST00000637519 INO80B-WBP1J3KQ70 363 aa23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 PJA2O43164 708 aa23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 TNFAIP2Q03169 654 aa23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 ERCC6LQ2NKX8 1250 aa23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 MNS1Q8NEH6 495 aa23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 MRPL4Q9BYD3 311 aaKnown RBP23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 INO80BQ9C086 356 aaPredicted RBP23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 NAGPAQ9UK23 515 aa23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 BZW2Q9Y6E2 419 aaKnown RBP23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 IQCF3P0C7M6 154 aa23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 TNNI1P19237 187 aa23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 CTGFP29279 349 aa23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 EFNA5P52803 228 aa23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 AMPD2Q01433 879 aa23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 PSMD6Q15008 389 aa23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 MAPK6Q16659 721 aa23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 KIAA0753Q2KHM9 967 aa23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 SLFN12LQ6IEE8 588 aa23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 GLYCTKQ8IVS8 523 aa23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 FBXL13Q8NEE6 735 aa23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 TCHPQ9BT92 498 aa23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 ACP6Q9NPH0 428 aa23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 RAB20Q9NX57 234 aa23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 TLL2Q9Y6L7 1015 aa23.44■■□□□ 1.34
CHRNA7-228ENST00000637519 EVPLQ92817 2033 aa23.43■■□□□ 1.34
CHRNA7-228ENST00000637519 CLDN3O15551 220 aa23.43■■□□□ 1.34
CHRNA7-228ENST00000637519 DYNC1LI2O43237 492 aaPredicted RBP23.43■■□□□ 1.34
CHRNA7-228ENST00000637519 SRGAP2O75044 1071 aa23.43■■□□□ 1.34
CHRNA7-228ENST00000637519 PPFIA4O75335 1185 aa23.43■■□□□ 1.34
CHRNA7-228ENST00000637519 VTNP04004 478 aa23.43■■□□□ 1.34
CHRNA7-228ENST00000637519 ZNF484Q5JVG2 852 aa23.43■■□□□ 1.34
CHRNA7-228ENST00000637519 OLFML2BQ68BL8 750 aa23.43■■□□□ 1.34
CHRNA7-228ENST00000637519 SCARA3Q6AZY7 606 aa23.43■■□□□ 1.34
CHRNA7-228ENST00000637519 SLC20A1Q8WUM9 679 aa23.43■■□□□ 1.34
CHRNA7-228ENST00000637519 FNBP1Q96RU3 617 aa23.43■■□□□ 1.34
CHRNA7-228ENST00000637519 ACO2Q99798 780 aaKnown RBP23.43■■□□□ 1.34
CHRNA7-228ENST00000637519 JPH2Q9BR39 696 aaPredicted RBP23.43■■□□□ 1.34
CHRNA7-228ENST00000637519 SLC5A4Q9NY91 659 aa23.43■■□□□ 1.34
CHRNA7-228ENST00000637519 PUF60Q9UHX1 559 aaKnown RBP23.43■■□□□ 1.34
CHRNA7-228ENST00000637519 COQ4Q9Y3A0 265 aa23.43■■□□□ 1.34
CHRNA7-228ENST00000637519 PMM2O15305 246 aa23.42■■□□□ 1.34
CHRNA7-228ENST00000637519 USP8P40818 1118 aa23.42■■□□□ 1.34
CHRNA7-228ENST00000637519 ALKBH5Q6P6C2 394 aaKnown RBP23.42■■□□□ 1.34
CHRNA7-228ENST00000637519 ZPBP2Q6X784 338 aa23.42■■□□□ 1.34
CHRNA7-228ENST00000637519 U2AF1L4Q8WU68 220 aaKnown RBP23.42■■□□□ 1.34
CHRNA7-228ENST00000637519 TATDN2Q93075 761 aa23.42■■□□□ 1.34
CHRNA7-228ENST00000637519 KIAA1586Q9HCI6 787 aa23.42■■□□□ 1.34
CHRNA7-228ENST00000637519 CDC23Q9UJX2 597 aa23.42■■□□□ 1.34
CHRNA7-228ENST00000637519 TADA3O75528 432 aa23.42■■□□□ 1.34
CHRNA7-228ENST00000637519 GPC3P51654 580 aa23.42■■□□□ 1.34
CHRNA7-228ENST00000637519 TDRD10Q5VZ19 366 aaKnown RBP23.42■■□□□ 1.34
CHRNA7-228ENST00000637519 IQSEC1Q6DN90 963 aa23.42■■□□□ 1.34
CHRNA7-228ENST00000637519 USP37Q86T82 979 aa23.42■■□□□ 1.34
CHRNA7-228ENST00000637519 PALB2Q86YC2 1186 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms