RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 PRR23AA6NEV1 266 aa19.85■□□□□ 0.77
CIITA-215ENST00000637439 ARF4P18085 180 aaPredicted RBP19.85■□□□□ 0.77
CIITA-215ENST00000637439 GBP2P32456 591 aaPredicted RBP19.85■□□□□ 0.77
CIITA-215ENST00000637439 ARL2P36404 184 aa19.85■□□□□ 0.77
CIITA-215ENST00000637439 CREMQ03060 361 aa19.85■□□□□ 0.77
CIITA-215ENST00000637439 CAPSQ13938 189 aa19.85■□□□□ 0.77
CIITA-215ENST00000637439 USP41Q3LFD5 358 aa19.85■□□□□ 0.77
CIITA-215ENST00000637439 ASCL5Q7RTU5 278 aa19.85■□□□□ 0.77
CIITA-215ENST00000637439 SMG7Q92540 1137 aaKnown RBP19.85■□□□□ 0.77
CIITA-215ENST00000637439 SNX27Q96L92 541 aa19.85■□□□□ 0.77
CIITA-215ENST00000637439 ZFP42Q96MM3 310 aa19.85■□□□□ 0.77
CIITA-215ENST00000637439 APOL6Q9BWW8 343 aa19.85■□□□□ 0.77
CIITA-215ENST00000637439 MIOSQ9NXC5 875 aa19.85■□□□□ 0.77
CIITA-215ENST00000637439 EPS15L1Q9UBC2 864 aa19.85■□□□□ 0.77
CIITA-215ENST00000637439 WNT16Q9UBV4 365 aa19.85■□□□□ 0.77
CIITA-215ENST00000637439 TPCN1Q9ULQ1 816 aa19.85■□□□□ 0.77
CIITA-215ENST00000637439 PAPLNO95428 1278 aa19.84■□□□□ 0.77
CIITA-215ENST00000637439 XRCC6P12956 609 aaKnown RBP eCLIP19.84■□□□□ 0.77
CIITA-215ENST00000637439 NPR3P17342 541 aa19.84■□□□□ 0.77
CIITA-215ENST00000637439 CALCRLQ16602 461 aa19.84■□□□□ 0.77
CIITA-215ENST00000637439 AMHR2Q16671 573 aa19.84■□□□□ 0.77
CIITA-215ENST00000637439 EARS2Q5JPH6 523 aaKnown RBP19.84■□□□□ 0.77
CIITA-215ENST00000637439 SLC27A1Q6PCB7 646 aa19.84■□□□□ 0.77
CIITA-215ENST00000637439 CCDC105Q8IYK2 499 aa19.84■□□□□ 0.77
CIITA-215ENST00000637439 SIX5Q8N196 739 aa19.84■□□□□ 0.77
CIITA-215ENST00000637439 NKD2Q969F2 451 aaPredicted RBP19.84■□□□□ 0.77
CIITA-215ENST00000637439 PIDD1Q9HB75 910 aa19.84■□□□□ 0.77
CIITA-215ENST00000637439 ZDHHC7Q9NXF8 308 aa19.84■□□□□ 0.77
CIITA-215ENST00000637439 FNIP2Q9P278 1114 aa19.84■□□□□ 0.77
CIITA-215ENST00000637439 N4BP1O75113 896 aaKnown RBP19.83■□□□□ 0.77
CIITA-215ENST00000637439 GRIK3Q13003 919 aa19.83■□□□□ 0.77
CIITA-215ENST00000637439 NR5A1Q13285 461 aa19.83■□□□□ 0.77
CIITA-215ENST00000637439 FUT10Q6P4F1 479 aa19.83■□□□□ 0.77
CIITA-215ENST00000637439 ASAP3Q8TDY4 903 aa19.83■□□□□ 0.77
CIITA-215ENST00000637439 TNFRSF25Q93038 417 aa19.83■□□□□ 0.77
CIITA-215ENST00000637439 NXF3Q9H4D5 531 aaKnown RBP19.83■□□□□ 0.77
CIITA-215ENST00000637439 TTC12Q9H892 705 aaPredicted RBP19.83■□□□□ 0.77
CIITA-215ENST00000637439 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.83■□□□□ 0.77
CIITA-215ENST00000637439 ADAM28Q9UKQ2 775 aa19.83■□□□□ 0.77
CIITA-215ENST00000637439 MTCL1Q9Y4B5 1905 aaKnown RBP19.82■□□□□ 0.76
CIITA-215ENST00000637439 A0A1B0GUA9 196 aa19.82■□□□□ 0.76
CIITA-215ENST00000637439 FAM205CA6NFA0 338 aa19.82■□□□□ 0.76
CIITA-215ENST00000637439 RFPL2O75678 378 aa19.82■□□□□ 0.76
CIITA-215ENST00000637439 CTDNEP1O95476 244 aa19.82■□□□□ 0.76
CIITA-215ENST00000637439 GLRA2P23416 452 aa19.82■□□□□ 0.76
CIITA-215ENST00000637439 RARRES1P49788 294 aa19.82■□□□□ 0.76
CIITA-215ENST00000637439 FRMD5Q7Z6J6 570 aa19.82■□□□□ 0.76
CIITA-215ENST00000637439 PALB2Q86YC2 1186 aa19.82■□□□□ 0.76
CIITA-215ENST00000637439 DTWD2Q8NBA8 298 aa19.82■□□□□ 0.76
CIITA-215ENST00000637439 NT5C3AQ9H0P0 336 aa19.82■□□□□ 0.76
CIITA-215ENST00000637439 DMDP11532 3685 aa19.81■□□□□ 0.76
CIITA-215ENST00000637439 PTPRZ1P23471 2315 aaPredicted RBP19.81■□□□□ 0.76
CIITA-215ENST00000637439 STK25O00506 426 aa19.81■□□□□ 0.76
CIITA-215ENST00000637439 TGM5O43548 720 aa19.81■□□□□ 0.76
CIITA-215ENST00000637439 PI15O43692 258 aa19.81■□□□□ 0.76
CIITA-215ENST00000637439 NARSO43776 548 aaKnown RBP19.81■□□□□ 0.76
CIITA-215ENST00000637439 NEMFO60524 1076 aa19.81■□□□□ 0.76
CIITA-215ENST00000637439 NPTXRO95502 500 aa19.81■□□□□ 0.76
CIITA-215ENST00000637439 SPATA31D3P0C874 917 aa19.81■□□□□ 0.76
CIITA-215ENST00000637439 RFX1P22670 979 aa19.81■□□□□ 0.76
CIITA-215ENST00000637439 AKAP5P24588 427 aa19.81■□□□□ 0.76
CIITA-215ENST00000637439 ANAPC15P60006 121 aa19.81■□□□□ 0.76
CIITA-215ENST00000637439 FOXK2Q01167 660 aa19.81■□□□□ 0.76
CIITA-215ENST00000637439 SPATA31D4Q6ZUB0 917 aa19.81■□□□□ 0.76
CIITA-215ENST00000637439 SLC44A3Q8N4M1 653 aa19.81■□□□□ 0.76
CIITA-215ENST00000637439 GSTCDQ8NEC7 633 aa19.81■□□□□ 0.76
CIITA-215ENST00000637439 ZNF707Q96C28 371 aaPredicted RBP19.81■□□□□ 0.76
CIITA-215ENST00000637439 PRIMPOLQ96LW4 560 aa19.81■□□□□ 0.76
CIITA-215ENST00000637439 GPR62Q9BZJ7 368 aa19.81■□□□□ 0.76
CIITA-215ENST00000637439 POLR3FQ9H1D9 316 aaPredicted RBP19.81■□□□□ 0.76
CIITA-215ENST00000637439 PARP2Q9UGN5 583 aa19.81■□□□□ 0.76
CIITA-215ENST00000637439 F8W810 466 aa19.8■□□□□ 0.76
CIITA-215ENST00000637439 B4GALT5O43286 388 aa19.8■□□□□ 0.76
CIITA-215ENST00000637439 TADA2AO75478 443 aa19.8■□□□□ 0.76
CIITA-215ENST00000637439 CFHP08603 1231 aa19.8■□□□□ 0.76
CIITA-215ENST00000637439 SRFP11831 508 aa19.8■□□□□ 0.76
CIITA-215ENST00000637439 FDPSP14324 419 aaKnown RBP19.8■□□□□ 0.76
CIITA-215ENST00000637439 TXKP42681 527 aa19.8■□□□□ 0.76
CIITA-215ENST00000637439 ANGPT1Q15389 498 aa19.8■□□□□ 0.76
CIITA-215ENST00000637439 LILRA6Q6PI73 481 aa19.8■□□□□ 0.76
CIITA-215ENST00000637439 MCPH1Q8NEM0 835 aa19.8■□□□□ 0.76
CIITA-215ENST00000637439 PIGOQ8TEQ8 1089 aa19.8■□□□□ 0.76
CIITA-215ENST00000637439 RSAD2Q8WXG1 361 aa19.8■□□□□ 0.76
CIITA-215ENST00000637439 RIN2Q8WYP3 895 aaPredicted RBP19.8■□□□□ 0.76
CIITA-215ENST00000637439 MYADMQ96S97 322 aa19.8■□□□□ 0.76
CIITA-215ENST00000637439 PRKD2Q9BZL6 878 aa19.8■□□□□ 0.76
CIITA-215ENST00000637439 PRMT7Q9NVM4 692 aaPredicted RBP19.8■□□□□ 0.76
CIITA-215ENST00000637439 ZFP37Q9Y6Q3 630 aaPredicted RBP19.8■□□□□ 0.76
CIITA-215ENST00000637439 SF3B1O75533 1304 aaKnown RBP eCLIP19.79■□□□□ 0.76
CIITA-215ENST00000637439 VPS13AQ96RL7 3174 aa19.79■□□□□ 0.76
CIITA-215ENST00000637439 RIF1Q5UIP0 2472 aaKnown RBP19.79■□□□□ 0.76
CIITA-215ENST00000637439 LRRIQ4A6NIV6 560 aa19.79■□□□□ 0.76
CIITA-215ENST00000637439 MYBP10242 640 aa19.79■□□□□ 0.76
CIITA-215ENST00000637439 TRIM29Q14134 588 aa19.79■□□□□ 0.76
CIITA-215ENST00000637439 HSP90AA2PQ14568 343 aaPredicted RBP19.79■□□□□ 0.76
CIITA-215ENST00000637439 PPP4R3CPQ6ZMV5 832 aa19.79■□□□□ 0.76
CIITA-215ENST00000637439 ZBTB8OSQ8IWT0 167 aa19.79■□□□□ 0.76
CIITA-215ENST00000637439 B3GALT6Q96L58 329 aa19.79■□□□□ 0.76
CIITA-215ENST00000637439 MTMR9Q96QG7 549 aa19.79■□□□□ 0.76
CIITA-215ENST00000637439 KLK14Q9P0G3 267 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms