RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 LRRC34Q8IZ02 419 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 DCLK2Q8N568 766 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 PIP4K2CQ8TBX8 421 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 HEXIM2Q96MH2 286 aaKnown RBP16.89■□□□□ 0.29
CLN5-218ENST00000637397 TMBIM4Q9HC24 238 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 TBC1D22BQ9NU19 505 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 HEY1Q9Y5J3 304 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 ESYT2A0FGR8 921 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 CYP11B2P19099 503 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 ITIH2P19823 946 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 JAK3P52333 1124 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 C1orf146Q5VVC0 180 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 TTC13Q8NBP0 860 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 SUFUQ9UMX1 484 aa16.89■□□□□ 0.29
CLN5-218ENST00000637397 PITPNM2Q9BZ72 1349 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 RPA1P27694 616 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 RFC1P35251 1148 aaPredicted RBP16.88■□□□□ 0.29
CLN5-218ENST00000637397 CATSPER3Q86XQ3 398 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 ANKMY2Q8IV38 441 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 ERP27Q96DN0 273 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 DUSP9Q99956 384 aaKnown RBP16.88■□□□□ 0.29
CLN5-218ENST00000637397 PABPC3Q9H361 631 aaKnown RBP16.88■□□□□ 0.29
CLN5-218ENST00000637397 TUFT1Q9NNX1 390 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 ABCD1P33897 745 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 TFDP1Q14186 410 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 KIAA0895Q8NCT3 520 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 CAVIN3Q969G5 261 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 NBPF3Q9H094 633 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 THAP2Q9H0W7 228 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 CLEC11AQ9Y240 323 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 TLR10Q9BXR5 811 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 RAVER2Q9HCJ3 691 aaKnown RBP16.88■□□□□ 0.29
CLN5-218ENST00000637397 TMEM131LA2VDJ0 1609 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 LPXNO60711 386 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 LDHAP00338 332 aaKnown RBP16.88■□□□□ 0.29
CLN5-218ENST00000637397 PON1P27169 355 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 EPHB1P54762 984 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 SH3RF1Q7Z6J0 888 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 ATP11CQ8NB49 1132 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 ARMC2Q8NEN0 867 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 HSPBP1Q9NZL4 362 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 UVRAGQ9P2Y5 699 aa16.88■□□□□ 0.29
CLN5-218ENST00000637397 KIF1CO43896 1103 aaKnown RBP16.87■□□□□ 0.29
CLN5-218ENST00000637397 KRT38O76015 456 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 CALB1P05937 261 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 FAM153BP0C7A2 387 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 ARL4AP40617 200 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 NFIXQ14938 502 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 FAM153CQ494X1 144 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 CPA5Q8WXQ8 436 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 APOL6Q9BWW8 343 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 KIAA1586Q9HCI6 787 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 FAM153AQ9UHL3 310 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 AFG3L2Q9Y4W6 797 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 KDM6AO15550 1401 aaPredicted RBP16.87■□□□□ 0.29
CLN5-218ENST00000637397 PLEKHG2Q9H7P9 1386 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 CCDC195A0A1B0GUA6 201 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 NPR1P16066 1061 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 POLD1P28340 1107 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.87■□□□□ 0.29
CLN5-218ENST00000637397 CREG2Q8IUH2 290 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 SLC13A1Q9BZW2 595 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 NOD2Q9HC29 1040 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 FIS1Q9Y3D6 152 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 PDE2AO00408 941 aaPredicted RBP16.87■□□□□ 0.29
CLN5-218ENST00000637397 ASNSP08243 561 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 P3H1Q32P28 736 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 IP6K2Q9UHH9 426 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 IGF2BP3O00425 579 aaKnown RBP eCLIP16.87■□□□□ 0.29
CLN5-218ENST00000637397 ST13P4Q8IZP2 240 aaPredicted RBP16.87■□□□□ 0.29
CLN5-218ENST00000637397 NSMCE1Q8WV22 266 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 KLC2Q9H0B6 622 aa16.87■□□□□ 0.29
CLN5-218ENST00000637397 CAND2O75155 1236 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 ABL1P00519 1130 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 AARSP49588 968 aaKnown RBP eCLIP16.86■□□□□ 0.29
CLN5-218ENST00000637397 MAPK7Q13164 816 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 MEI1Q5TIA1 1274 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 FBXO25Q8TCJ0 367 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 ATP6V0A4Q9HBG4 840 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 SLC38A10Q9HBR0 1119 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 TLK1Q9UKI8 766 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 TBX3O15119 743 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 CASP4P49662 377 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 PLCB4Q15147 1175 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 MCUQ8NE86 351 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 NLRP4Q96MN2 994 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 TMEM117Q9H0C3 514 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 EPS15L1Q9UBC2 864 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 GABBR1Q9UBS5 961 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 SLC9A2Q9UBY0 812 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 ZWINTO95229 277 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 ZNF667Q5HYK9 610 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 ZNF571Q7Z3V5 609 aaPredicted RBP16.86■□□□□ 0.29
CLN5-218ENST00000637397 RHPN2Q8IUC4 686 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 DTX3LQ8TDB6 740 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 AENQ8WTP8 325 aaKnown RBP16.86■□□□□ 0.29
CLN5-218ENST00000637397 PPP1R16BQ96T49 567 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 APOBEC2Q9Y235 224 aaKnown RBP16.86■□□□□ 0.29
CLN5-218ENST00000637397 MEGF6O75095 1541 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 FAM47DPA6NHR8 397 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms