RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, human

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRB3-223	ENST00000637293	DNAI2	Q9GZS0	605 aa		2.88	□□□□□ -1.95
GABRB3-223	ENST00000637293	QRSL1	Q9H0R6	528 aa	Known RBP	2.88	□□□□□ -1.95
GABRB3-223	ENST00000637293	TMEM8A	Q9HCN3	771 aa		2.88	□□□□□ -1.95
GABRB3-223	ENST00000637293	ERVK-5	Q9HDB9	667 aa		2.88	□□□□□ -1.95
GABRB3-223	ENST00000637293	NECTIN3	Q9NQS3	549 aa		2.88	□□□□□ -1.95
GABRB3-223	ENST00000637293	CNNM1	Q9NRU3	951 aa		2.88	□□□□□ -1.95
GABRB3-223	ENST00000637293	KCND1	Q9NSA2	647 aa		2.88	□□□□□ -1.95
GABRB3-223	ENST00000637293	MYO1A	Q9UBC5	1043 aa		2.88	□□□□□ -1.95
GABRB3-223	ENST00000637293	RABL2A	Q9UBK7	228 aa	Predicted RBP	2.88	□□□□□ -1.95
GABRB3-223	ENST00000637293	TJP2	Q9UDY2	1190 aa		2.88	□□□□□ -1.95
GABRB3-223	ENST00000637293	TBX20	Q9UMR3	447 aa		2.88	□□□□□ -1.95
GABRB3-223	ENST00000637293	SRPK3	Q9UPE1	567 aa		2.88	□□□□□ -1.95
GABRB3-223	ENST00000637293	GPR55	Q9Y2T6	319 aa	Predicted RBP	2.88	□□□□□ -1.95
GABRB3-223	ENST00000637293	ANGPTL3	Q9Y5C1	460 aa		2.88	□□□□□ -1.95
GABRB3-223	ENST00000637293	NR2E3	Q9Y5X4	410 aa		2.88	□□□□□ -1.95
GABRB3-223	ENST00000637293	ATP23	Q9Y6H3	246 aa		2.88	□□□□□ -1.95
GABRB3-223	ENST00000637293	CCDC78	A2IDD5	438 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	CCDC154	A6NI56	674 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	NT5C1B-RDH14	C9J2C7	533 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293		J3QW42	95 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	DDX39A	O00148	427 aa	Known RBP	2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	SPINT1	O43278	529 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	EFS	O43281	561 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	SRGAP2	O75044	1071 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	PTP4A3	O75365	173 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	FAM155B	O75949	473 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	KIAA0754	O94854	1291 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	SLC4A1	P02730	911 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	F11	P03951	625 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	ITGA5	P08648	1049 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	CSH1	P0DML2	217 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	CSH2	P0DML3	217 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	EIF2AK2	P19525	551 aa	Known RBP	2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	FGFR2	P21802	821 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	MAPK3	P27361	379 aa	Predicted RBP	2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	CST5	P28325	142 aa	Predicted RBP	2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	KRT2	P35908	639 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	HADHA	P40939	763 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	CD86	P42081	329 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	WAS	P42768	502 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	PSMC4	P43686	418 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	AARS	P49588	968 aa	Known RBP eCLIP	2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	MCM2	P49736	904 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	FXR1	P51114	621 aa	Known RBP eCLIP	2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	KIF11	P52732	1056 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	WDR4	P57081	412 aa	Known RBP	2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	RAC1	P63000	192 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	ERVK-24	P63145	666 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	IFI35	P80217	286 aa	Predicted RBP	2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	LSM11	P83369	360 aa	Known RBP eCLIP	2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	FOXO4	P98177	505 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	FMO1	Q01740	532 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	PPARD	Q03181	441 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	ZBTB16	Q05516	673 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	DUSP4	Q13115	394 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	SEMA3A	Q14563	771 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	ANKRD1	Q15327	319 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	SURF1	Q15526	300 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	ZKSCAN8	Q15776	578 aa	Predicted RBP	2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	INF2	Q27J81	1249 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	MUM1	Q2TAK8	710 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	KIF4B	Q2VIQ3	1234 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	C2orf76	Q3KRA6	126 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	MMEL1	Q495T6	779 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	TCP11X2	Q5H9J9	407 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	MUM1L1	Q5H9M0	696 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	FAM26F	Q5R3K3	315 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	MAP3K21	Q5TCX8	1036 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	KLHDC7A	Q5VTJ3	777 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	ARL6IP4	Q66PJ3	421 aa	Known RBP	2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	KAZN	Q674X7	775 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	CWF19L1	Q69YN2	538 aa	Known RBP	2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	DENND5A	Q6IQ26	1287 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	FAM117B	Q6P1L5	589 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	KLHL17	Q6TDP4	642 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	KDELC1	Q6UW63	502 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	ESPNL	Q6ZVH7	1005 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	RUFY3	Q7L099	469 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	MIGA2	Q7L4E1	593 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	PRICKLE2	Q7Z3G6	844 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	TMC6	Q7Z403	805 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	KCNK18	Q7Z418	384 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	RALYL	Q86SE5	291 aa	Known RBP	2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	TTC7B	Q86TV6	843 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	TSPYL5	Q86VY4	417 aa	Predicted RBP	2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	CHD1L	Q86WJ1	897 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	GATAD2A	Q86YP4	633 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	LURAP1L	Q8IV03	231 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	HERC6	Q8IVU3	1022 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	CCDC117	Q8IWD4	279 aa	Predicted RBP	2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	SIRT2	Q8IXJ6	389 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	THNSL1	Q8IYQ7	743 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	CCDC170	Q8IYT3	715 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	TRMT2A	Q8IZ69	625 aa	Known RBP	2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	OXR1	Q8N573	874 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	C10orf53	Q8N6V4	93 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	CCDC150	Q8NCX0	1101 aa		2.87	□□□□□ -1.95
GABRB3-223	ENST00000637293	IL31RA	Q8NI17	732 aa		2.87	□□□□□ -1.95

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