RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 PAPOLAP51003 745 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 PAPOLBQ9NRJ5 636 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 NKX1-2Q9UD57 310 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 NPTXRO95502 500 aa16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 TTC4O95801 387 aa16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 GH1P01241 217 aa16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 ITIH2P19823 946 aa16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 PEX5P50542 639 aa16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 IL9RQ01113 521 aa16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 KIF22Q14807 665 aa16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 SGSM1Q2NKQ1 1148 aa16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 CGB2Q6NT52 195 aa16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 TXNRD3Q86VQ6 643 aa16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 CATSPER3Q86XQ3 398 aa16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 C12orf50Q8NA57 414 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 AGPAT1Q99943 283 aa16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 MKNK1Q9BUB5 465 aa16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 GLT8D2Q9H1C3 349 aa16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 JMJD4Q9H9V9 463 aa16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 GPCPD1Q9NPB8 672 aa16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 APEX2Q9UBZ4 518 aa16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 STK24Q9Y6E0 443 aa16.67■□□□□ 0.26
CACNA1A-235ENST00000637004 TMEM110-MUSTN1A8MSY1 372 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 PEX11AO75192 247 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 TPBGLP0DKB5 382 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 COMTP21964 271 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 RFX1P22670 979 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 STAT3P40763 770 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 MARCKSL1P49006 195 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 RASSF2P50749 326 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 POLGP54098 1239 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 GPC5P78333 572 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 MPP2Q14168 576 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 SLC10A5Q5PT55 438 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 C7orf43Q8WVR3 580 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 NUDCD1Q96RS6 583 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 GPR88Q9GZN0 384 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 ACTL7BQ9Y614 415 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 FTLP02792 175 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 SNHG28P0DPA3 235 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 RPA1P27694 616 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 YARSP54577 528 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 ROR2Q01974 943 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 CTTNQ14247 550 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 ENDOVQ8N8Q3 282 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 ANKLE1Q8NAG6 615 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 SH3TC2Q8TF17 1288 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 SLCO2A1Q92959 643 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 LRRC37BQ96QE4 947 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 INTS2Q9H0H0 1204 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 LRRC19Q9H756 370 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 RPL26L1Q9UNX3 145 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 ADGRA3Q8IWK6 1321 aa16.66■□□□□ 0.26
CACNA1A-235ENST00000637004 PYGMP11217 842 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 TAC1P20366 129 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 CNGA1P29973 690 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 ALDH3A1P30838 453 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 KLC1Q07866 573 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 NFIL3Q16649 462 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 WASHC2DQ5SRD0 308 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 APBB1IPQ7Z5R6 666 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 ADGRF4Q8IZF3 695 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 ERP27Q96DN0 273 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 UIMC1Q96RL1 719 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 SETDB2Q96T68 719 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 MYLK2Q9H1R3 596 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 AAASQ9NRG9 546 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 MTMR4Q9NYA4 1195 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 LGALS13Q9UHV8 139 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 ZBTB12Q9Y330 459 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 STARD13Q9Y3M8 1113 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 USH1CQ9Y6N9 552 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 COL5A3P25940 1745 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 MYO3BQ8WXR4 1341 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 MAPK13O15264 365 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 ACADSP16219 412 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 KCNJ1P48048 391 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 PSMC6P62333 389 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 MESDQ14696 234 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 GNPTABQ3T906 1256 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 CWF19L1Q69YN2 538 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 NBPF5PQ86XG9 351 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 PALB2Q86YC2 1186 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 ANKRD35Q8N283 1001 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 CYP3A7-CYP3A51PA0A087WV96 503 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 TGFB1I1O43294 461 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 THAP12O43422 761 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 CDH16O75309 829 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 DCTN3O75935 186 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 LMNAP02545 664 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 GAP43P17677 238 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 CYP3A7P24462 503 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 CAV1Q03135 178 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 TRAF1Q13077 416 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 MAEAQ7L5Y9 396 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 FAM13CQ8NE31 585 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 CCDC77Q9BR77 488 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 PLVAPQ9BX97 442 aa16.65■□□□□ 0.26
CACNA1A-235ENST00000637004 RTFDC1Q9BY42 306 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms