RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 HVCN1Q96D96 273 aa15.64■□□□□ 0.09
CLN6-215ENST00000636674 MYCBPQ99417 103 aaPredicted RBP15.64■□□□□ 0.09
CLN6-215ENST00000636674 TMX4Q9H1E5 349 aaPredicted RBP15.64■□□□□ 0.09
CLN6-215ENST00000636674 SEMA4AQ9H3S1 761 aa15.64■□□□□ 0.09
CLN6-215ENST00000636674 AZI2Q9H6S1 392 aa15.64■□□□□ 0.09
CLN6-215ENST00000636674 LARSQ9P2J5 1176 aaKnown RBP15.64■□□□□ 0.09
CLN6-215ENST00000636674 MTUS1Q9ULD2 1270 aa15.64■□□□□ 0.09
CLN6-215ENST00000636674 MRPL11Q9Y3B7 192 aaKnown RBP15.64■□□□□ 0.09
CLN6-215ENST00000636674 CCT8L1PA6NM43 557 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 PLA2G6O60733 806 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 CYP1A2P05177 515 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 ARP10275 920 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 CHRNB2P17787 502 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 COILP38432 576 aaPredicted RBP15.63■□□□□ 0.09
CLN6-215ENST00000636674 RBM5P52756 815 aaKnown RBP eCLIP15.63■□□□□ 0.09
CLN6-215ENST00000636674 PARP9Q8IXQ6 854 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 ANKS4BQ8N8V4 417 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 ACCSQ96QU6 501 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 PCDHB18PQ96TA0 734 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 ROPN1BQ9BZX4 212 aaPredicted RBP15.63■□□□□ 0.09
CLN6-215ENST00000636674 ROPN1Q9HAT0 212 aaPredicted RBP15.63■□□□□ 0.09
CLN6-215ENST00000636674 ARHGEF10LQ9HCE6 1279 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 HERC5Q9UII4 1024 aaKnown RBP15.63■□□□□ 0.09
CLN6-215ENST00000636674 DBR1Q9UK59 544 aaKnown RBP15.63■□□□□ 0.09
CLN6-215ENST00000636674 GTF3C4Q9UKN8 822 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 TMX2Q9Y320 296 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 PASKQ96RG2 1323 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 DCAF8L1A6NGE4 600 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 IPO5O00410 1097 aaKnown RBP15.63■□□□□ 0.09
CLN6-215ENST00000636674 PPIP5K2O43314 1243 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 PDE6BP35913 854 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 IRX3P78415 501 aaPredicted RBP15.63■□□□□ 0.09
CLN6-215ENST00000636674 SNCBQ16143 134 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 PREPLQ4J6C6 727 aaPredicted RBP15.63■□□□□ 0.09
CLN6-215ENST00000636674 WLSQ5T9L3 541 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 PADI6Q6TGC4 694 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 XXYLT1Q8NBI6 393 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 MASTLQ96GX5 879 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 SELENOSQ9BQE4 189 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 LRRC19Q9H756 370 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 UVRAGQ9P2Y5 699 aa15.63■□□□□ 0.09
CLN6-215ENST00000636674 PYGMP11217 842 aa15.62■□□□□ 0.09
CLN6-215ENST00000636674 MXI1P50539 228 aa15.62■□□□□ 0.09
CLN6-215ENST00000636674 TRMT10CQ7L0Y3 403 aaKnown RBP15.62■□□□□ 0.09
CLN6-215ENST00000636674 TAOK1Q7L7X3 1001 aa15.62■□□□□ 0.09
CLN6-215ENST00000636674 NOP9Q86U38 636 aaKnown RBP15.62■□□□□ 0.09
CLN6-215ENST00000636674 SPICE1Q8N0Z3 855 aa15.62■□□□□ 0.09
CLN6-215ENST00000636674 SHC3Q92529 594 aa15.62■□□□□ 0.09
CLN6-215ENST00000636674 INTS9Q9NV88 658 aaKnown RBP15.62■□□□□ 0.09
CLN6-215ENST00000636674 HAUS2Q9NVX0 235 aa15.62■□□□□ 0.09
CLN6-215ENST00000636674 SLC12A4Q9UP95 1085 aa15.62■□□□□ 0.09
CLN6-215ENST00000636674 PLS3P13797 630 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 IFI35P80217 286 aaPredicted RBP15.61■□□□□ 0.09
CLN6-215ENST00000636674 GTF2BQ00403 316 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 AUHQ13825 339 aaKnown RBP15.61■□□□□ 0.09
CLN6-215ENST00000636674 MESDQ14696 234 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 NBPF9Q3BBW0 867 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 PLCD3Q8N3E9 789 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 RDH13Q8NBN7 331 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 ZNF564Q8TBZ8 553 aaPredicted RBP15.61■□□□□ 0.09
CLN6-215ENST00000636674 JPH2Q9BR39 696 aaPredicted RBP15.61■□□□□ 0.09
CLN6-215ENST00000636674 MXRA8Q9BRK3 442 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 TIPINQ9BVW5 301 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 NSRP1Q9H0G5 558 aaKnown RBP15.61■□□□□ 0.09
CLN6-215ENST00000636674 CD248Q9HCU0 757 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 HSPBP1Q9NZL4 362 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 WHRNQ9P202 907 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 BRCA1P38398 1863 aaKnown RBP15.61■□□□□ 0.09
CLN6-215ENST00000636674 PSME4Q14997 1843 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 RASGRF2O14827 1237 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 MGRN1O60291 552 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 ECE2O60344 883 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 LYPLA2O95372 231 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 SGPL1O95470 568 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 RDXP35241 583 aaKnown RBP15.61■□□□□ 0.09
CLN6-215ENST00000636674 ECE1P42892 770 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 GCLMP48507 274 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 FMO1Q01740 532 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 RASA3Q14644 834 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 NIPA1Q7RTP0 329 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 PLEKHO2Q8TD55 490 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 EPS8L3Q8TE67 593 aaKnown RBP15.61■□□□□ 0.09
CLN6-215ENST00000636674 CHURC1Q8WUH1 139 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 CBWD1Q9BRT8 395 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 TMEM117Q9H0C3 514 aa15.61■□□□□ 0.09
CLN6-215ENST00000636674 TLDC2A0PJX2 215 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 TMEM110-MUSTN1A8MSY1 372 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 ECEL1O95672 775 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 P4HBP07237 508 aaKnown RBP15.6■□□□□ 0.09
CLN6-215ENST00000636674 RARAP10276 462 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 FGFR4P22455 802 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 MAP2K2P36507 400 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 RWDD2BP57060 319 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 PPARDQ03181 441 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 ZNF746Q6NUN9 644 aaPredicted RBP15.6■□□□□ 0.09
CLN6-215ENST00000636674 CCDC105Q8IYK2 499 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 LRRC34Q8IZ02 419 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 PSPC1Q8WXF1 523 aaKnown RBP15.6■□□□□ 0.09
CLN6-215ENST00000636674 KREMEN1Q96MU8 473 aa15.6■□□□□ 0.09
CLN6-215ENST00000636674 CSRNP1Q96S65 589 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms