RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-228	ENST00000635853	CIDEB	Q9UHD4	219 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	EXOC1L	A0A1B0GW35	172 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	ZNF263	O14978	683 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	RAD51C	O43502	376 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	RASSF9	O75901	435 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	BMP3	P12645	472 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	PLS3	P13797	630 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	OCRL	Q01968	901 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	CAV1	Q03135	178 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	GPATCH4	Q5T3I0	446 aa	Known RBP	10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	RTKN2	Q8IZC4	609 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	ATP11C	Q8NB49	1132 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	CYP39A1	Q9NYL5	469 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	STX18	Q9P2W9	335 aa	Known RBP	10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	SNX24	Q9Y343	169 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	AFP	P02771	609 aa	Known RBP	10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	CALB2	P22676	271 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	RARS2	Q5T160	578 aa	Known RBP	10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	RC3H1	Q5TC82	1133 aa	Known RBP	10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	PATL1	Q86TB9	770 aa	Known RBP	10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	FANCB	Q8NB91	859 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	FSD1L	Q9BXM9	530 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	ROPN1B	Q9BZX4	212 aa	Predicted RBP	10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	ROPN1	Q9HAT0	212 aa	Predicted RBP	10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	ZCCHC18	P0CG32	403 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	NCF2	P19878	526 aa	Predicted RBP	10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	CA4	P22748	312 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	SLC16A2	P36021	539 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	RAP1GDS1	P52306	607 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	MTTP	P55157	894 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	KBTBD12	Q3ZCT8	623 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	SGO2	Q562F6	1265 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	GALNT15	Q8N3T1	639 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	ASIC4	Q96FT7	647 aa		10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	MRPL47	Q9HD33	250 aa	Known RBP	10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	AFF4	Q9UHB7	1163 aa	Known RBP	10.42	□□□□□ -0.74
SPTAN1-228	ENST00000635853	CFAP69	A5D8W1	941 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	CCDC15	Q0P6D6	951 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	DNAL1	Q4LDG9	190 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	ZNF280C	Q8ND82	737 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	MAML1	Q92585	1016 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	MTIF3	Q9H2K0	278 aa	Known RBP	10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	DNAAF2	Q9NVR5	837 aa	Known RBP	10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	CEP72	Q9P209	647 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	DBNL	Q9UJU6	430 aa	Known RBP	10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	HLA-DPA1	P20036	260 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	CRKL	P46109	303 aa	Known RBP	10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	ERVK-24	P63145	666 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	CENPT	Q96BT3	561 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	ZFYVE19	Q96K21	471 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	NDST4	Q9H3R1	872 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	SARS2	Q9NP81	518 aa	Known RBP	10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	MID2	Q9UJV3	735 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	CBX3	Q13185	183 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	ARMC3	Q5W041	872 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	TWF2	Q6IBS0	349 aa	Known RBP	10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	RAET1E	Q8TD07	263 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	EDC3	Q96F86	508 aa	Known RBP	10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	MLXIPL	Q9NP71	852 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	SELENON	Q9NZV5	590 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	DKK3	Q9UBP4	350 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853		E5RI56	91 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	DMPK	Q09013	629 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	PTGDR	Q13258	359 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	DDX47	Q9H0S4	455 aa	Known RBP	10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	DNAJC5B	Q9UF47	199 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	TSR3	Q9UJK0	312 aa	Known RBP	10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	LSM1	O15116	133 aa	Known RBP	10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	CFLAR	O15519	480 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	ATP6V1G1	O75348	118 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	MT-ND3	P03897	115 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	TRAPPC10	P48553	1259 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	CACNB1	Q02641	598 aa	Predicted RBP	10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	NCAPH	Q15003	741 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	RNF207	Q6ZRF8	634 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	SLC26A7	Q8TE54	656 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	TATDN2	Q93075	761 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	FAXDC2	Q96IV6	333 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	OLFML3	Q9NRN5	406 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	SENP1	Q9P0U3	644 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	SUN2	Q9UH99	717 aa		10.41	□□□□□ -0.74
SPTAN1-228	ENST00000635853	LRRC53	A6NM62	1247 aa		10.4	□□□□□ -0.74
SPTAN1-228	ENST00000635853	NEURL1B	A8MQ27	555 aa		10.4	□□□□□ -0.74
SPTAN1-228	ENST00000635853	MEIS1	O00470	390 aa		10.4	□□□□□ -0.74
SPTAN1-228	ENST00000635853	CLIC2	O15247	247 aa		10.4	□□□□□ -0.74
SPTAN1-228	ENST00000635853	ZBED1	O96006	694 aa		10.4	□□□□□ -0.74
SPTAN1-228	ENST00000635853	NR2F2	P24468	414 aa		10.4	□□□□□ -0.74
SPTAN1-228	ENST00000635853	TARS	P26639	723 aa	Known RBP	10.4	□□□□□ -0.74
SPTAN1-228	ENST00000635853	DCTN2	Q13561	401 aa	Known RBP	10.4	□□□□□ -0.74
SPTAN1-228	ENST00000635853	TAGAP	Q8N103	731 aa		10.4	□□□□□ -0.74
SPTAN1-228	ENST00000635853	UBE2T	Q9NPD8	197 aa	Predicted RBP	10.4	□□□□□ -0.74
SPTAN1-228	ENST00000635853	MGRN1	O60291	552 aa		10.4	□□□□□ -0.74
SPTAN1-228	ENST00000635853	CCDC166	P0CW27	439 aa		10.4	□□□□□ -0.74
SPTAN1-228	ENST00000635853	TNFAIP2	Q03169	654 aa		10.4	□□□□□ -0.74
SPTAN1-228	ENST00000635853	ITGB3BP	Q13352	177 aa	Predicted RBP	10.4	□□□□□ -0.74
SPTAN1-228	ENST00000635853	RBBP7	Q16576	425 aa		10.4	□□□□□ -0.74
SPTAN1-228	ENST00000635853	TAF1B	Q53T94	588 aa	Predicted RBP	10.4	□□□□□ -0.74
SPTAN1-228	ENST00000635853	SLC10A5	Q5PT55	438 aa		10.4	□□□□□ -0.74
SPTAN1-228	ENST00000635853	ERICH1	Q86X53	443 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms